6KY
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C | CA | sing | 1.51Å | 1.51Å | |
| C | O | doub | 1.21Å | 1.23Å | |
| CN2 | N | sing | 1.47Å | 1.48Å | |
| CA | N | sing | 1.47Å | 1.49Å | |
| CA | CB | sing | 1.53Å | 1.54Å | |
| N | CN1 | sing | 1.47Å | 1.48Å | |
| CG | CB | sing | 1.53Å | 1.54Å | |
| CG | SE | sing | 1.96Å | 1.96Å | |
| SE | CE | sing | 1.96Å | 1.95Å | |
| CA | HA | sing | 1.09Å | 1.10Å | |
| CB | HB1 | sing | 1.09Å | 1.10Å | |
| CG | HG1 | sing | 1.09Å | 1.10Å | |
| C | OXT | sing | 1.34Å | 1.37Å | |
| CB | H1 | sing | 1.09Å | 1.10Å | |
| CG | H2 | sing | 1.09Å | 1.10Å | |
| CE | H3 | sing | 1.09Å | 1.10Å | |
| CE | H4 | sing | 1.09Å | 1.10Å | |
| CE | H5 | sing | 1.09Å | 1.10Å | |
| CN1 | H6 | sing | 1.09Å | 1.10Å | |
| CN1 | H7 | sing | 1.09Å | 1.10Å | |
| CN1 | H8 | sing | 1.09Å | 1.10Å | |
| CN2 | H9 | sing | 1.09Å | 1.10Å | |
| CN2 | H10 | sing | 1.09Å | 1.10Å | |
| CN2 | H11 | sing | 1.09Å | 1.10Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| CA | C | O | 121.2° | 120.0° |
| C | CA | N | 109.6° | 109.5° |
| C | CA | CB | 110.2° | 109.5° |
| C | CA | HA | 107.7° | 109.4° |
| CA | C | OXT | 115.5° | 120.0° |
| O | C | OXT | 123.2° | 120.0° |
| CN2 | N | CA | 112.3° | 111.0° |
| CN2 | N | CN1 | 107.5° | 111.0° |
| N | CN2 | H9 | 109.5° | 109.4° |
| N | CN2 | H10 | 109.5° | 109.5° |
| N | CN2 | H11 | 109.5° | 109.5° |
| N | CA | CB | 113.7° | 109.5° |
| CA | N | CN1 | 113.9° | 111.0° |
| N | CA | HA | 107.9° | 109.5° |
| CA | CB | CG | 111.7° | 109.5° |
| CB | CA | HA | 107.4° | 109.4° |
| CA | CB | HB1 | 108.9° | 109.4° |
| CA | CB | H1 | 108.9° | 109.5° |
| N | CN1 | H6 | 109.5° | 109.4° |
| N | CN1 | H7 | 109.4° | 109.4° |
| N | CN1 | H8 | 109.5° | 109.6° |
| CB | CG | SE | 113.1° | 109.5° |
| CG | CB | HB1 | 108.9° | 109.5° |
| CB | CG | HG1 | 108.6° | 109.5° |
| CG | CB | H1 | 108.9° | 109.5° |
| CB | CG | H2 | 108.6° | 109.5° |
| CG | SE | CE | 97.1° | 101.0° |
| SE | CG | HG1 | 108.6° | 109.4° |
| SE | CG | H2 | 108.6° | 109.4° |
| SE | CE | H3 | 109.5° | 109.4° |
| SE | CE | H4 | 109.5° | 109.4° |
| SE | CE | H5 | 109.5° | 109.4° |
| HB1 | CB | H1 | 109.5° | 109.5° |
| HG1 | CG | H2 | 109.5° | 109.5° |
| C | OXT | HXT | 109.5° | 117.0° |
| H3 | CE | H4 | 109.4° | 109.5° |
| H3 | CE | H5 | 109.5° | 109.5° |
| H4 | CE | H5 | 109.5° | 109.5° |
| H6 | CN1 | H7 | 109.5° | 109.4° |
| H6 | CN1 | H8 | 109.4° | 109.5° |
| H7 | CN1 | H8 | 109.5° | 109.5° |
| H9 | CN2 | H10 | 109.4° | 109.5° |
| H9 | CN2 | H11 | 109.5° | 109.5° |
| H10 | CN2 | H11 | 109.5° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| CA | C | O | OXT | 176.0° | 180.0° |
| C | CA | N | CN2 | 50.4° | 68.9° |
| C | CA | N | CB | 123.8° | 120.0° |
| C | CA | N | HA | 117.1° | 120.0° |
| C | CA | CB | HA | 117.1° | 119.9° |
| C | CA | N | CN1 | 72.1° | 55.1° |
| C | CA | CB | CG | 170.1° | 175.0° |
| C | CA | CB | HB1 | 69.5° | 65.0° |
| C | CA | CB | H1 | 49.8° | 55.0° |
| CA | C | OXT | HXT | 176.2° | 179.9° |
| O | C | CA | N | 68.1° | 26.4° |
| O | C | CA | CB | 57.8° | 93.7° |
| O | C | CA | HA | 174.7° | 146.4° |
| O | C | OXT | HXT | 0.0° | 0.0° |
| CN2 | N | CA | CN1 | 122.5° | 124.0° |
| CN2 | N | CA | CB | 174.3° | 51.2° |
| CN2 | N | CA | HA | 66.7° | 171.1° |
| CN2 | N | CN1 | H6 | 180.0° | 60.0° |
| CN2 | N | CN1 | H7 | 60.0° | 59.9° |
| CN2 | N | CN1 | H8 | 60.0° | 180.0° |
| N | CN2 | H9 | H10 | 120.0° | 120.0° |
| N | CN2 | H9 | H11 | 120.0° | 120.0° |
| N | CN2 | H10 | H11 | 120.0° | 120.0° |
| N | CA | CB | HA | 119.4° | 120.0° |
| N | CA | CB | CG | 66.4° | 65.0° |
| N | CA | CB | HB1 | 54.0° | 55.0° |
| N | CA | C | OXT | 108.2° | 153.6° |
| N | CA | CB | H1 | 173.3° | 175.0° |
| CA | N | CN1 | H6 | 54.9° | 64.0° |
| CA | N | CN1 | H7 | 174.9° | 176.1° |
| CA | N | CN1 | H8 | 65.1° | 56.0° |
| CA | N | CN2 | H9 | 180.0° | 58.4° |
| CA | N | CN2 | H10 | 60.0° | 61.6° |
| CA | N | CN2 | H11 | 60.0° | 178.4° |
| CB | CA | N | CN1 | 51.7° | 175.1° |
| CA | CB | CG | HB1 | 120.4° | 120.0° |
| CA | CB | CG | H1 | 120.3° | 120.0° |
| CA | CB | CG | SE | 175.1° | 180.0° |
| CA | CB | HB1 | H1 | 119.0° | 120.0° |
| CA | CB | CG | HG1 | 54.6° | 60.0° |
| CB | CA | C | OXT | 125.9° | 86.3° |
| CA | CB | CG | H2 | 64.3° | 60.0° |
| CN1 | N | CA | HA | 170.8° | 64.9° |
| N | CN1 | H6 | H7 | 120.0° | 119.9° |
| N | CN1 | H6 | H8 | 120.0° | 120.1° |
| N | CN1 | H7 | H8 | 120.0° | 120.1° |
| CN1 | N | CN2 | H9 | 53.9° | 65.6° |
| CN1 | N | CN2 | H10 | 173.9° | 174.5° |
| CN1 | N | CN2 | H11 | 66.0° | 54.4° |
| CB | CG | SE | HG1 | 120.5° | 120.0° |
| CB | CG | SE | H2 | 120.5° | 120.0° |
| CB | CG | SE | CE | 75.5° | 180.0° |
| CG | CB | CA | HA | 53.0° | 55.0° |
| CG | CB | HB1 | H1 | 119.0° | 120.0° |
| CB | CG | HG1 | H2 | 118.3° | 120.0° |
| SE | CG | CB | HB1 | 64.5° | 60.0° |
| SE | CG | HG1 | H2 | 118.4° | 120.0° |
| SE | CG | CB | H1 | 54.8° | 60.0° |
| CG | SE | CE | H3 | 180.0° | 60.0° |
| CG | SE | CE | H4 | 60.0° | 60.0° |
| CG | SE | CE | H5 | 60.0° | 180.0° |
| CE | SE | CG | HG1 | 163.9° | 60.0° |
| CE | SE | CG | H2 | 45.0° | 60.0° |
| SE | CE | H3 | H4 | 120.0° | 119.9° |
| SE | CE | H3 | H5 | 120.0° | 120.0° |
| SE | CE | H4 | H5 | 120.0° | 119.9° |
| HA | CA | CB | HB1 | 173.4° | 175.0° |
| HA | CA | C | OXT | 9.0° | 33.6° |
| HA | CA | CB | H1 | 67.3° | 65.0° |
| HB1 | CB | CG | HG1 | 175.0° | 180.0° |
| HB1 | CB | CG | H2 | 56.1° | 60.0° |
| HG1 | CG | CB | H1 | 65.7° | 60.0° |
| H1 | CB | CG | H2 | 175.4° | 180.0° |
| H3 | CE | H4 | H5 | 120.0° | 120.1° |
| H6 | CN1 | H7 | H8 | 120.0° | 120.0° |
| H9 | CN2 | H10 | H11 | 120.0° | 120.0° |
