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SummaryGeometryRelated PDB entries

6K5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
FABCAGsing1.40Å1.35Å
FAFCAGsing1.40Å1.34Å
FAKCAGsing1.40Å1.36Å
CAGCAHsing1.51Å1.52Å
CAVCBAsing1.54Å1.59Å
CAVNAUsing1.47Å1.50Å
CBBCBAsing1.53Å1.56Å
CBBOBCsing1.43Å1.40Å
CACCAHdoub1.38Å1.42ÅAromatic
CACCADsing1.39Å1.42ÅAromatic
CBDCBAsing1.53Å1.54Å
CBDCLsing1.80Å1.88Å
CAHCAIsing1.40Å1.42ÅAromatic
CBACAZsing1.54Å1.58Å
NAACADsing1.39Å1.39Å
CADNAEdoub1.33Å1.38ÅAromatic
NAUCAOsing1.38Å1.46Å
NAUCAZsing1.47Å1.52Å
NALCAOdoub1.33Å1.41ÅAromatic
NALCAMsing1.33Å1.39ÅAromatic
CAICAMsing1.48Å1.58Å
CAICAJdoub1.39Å1.41ÅAromatic
CAONAPsing1.33Å1.38ÅAromatic
CAMNANdoub1.33Å1.39ÅAromatic
NAECAJsing1.32Å1.36ÅAromatic
NAPCAQdoub1.33Å1.39ÅAromatic
NANCAQsing1.33Å1.38ÅAromatic
CAQNARsing1.38Å1.49Å
CAWNARsing1.47Å1.50Å
CAWCAXsing1.53Å1.55Å
NARCASsing1.47Å1.50Å
CASCATsing1.53Å1.56Å
CAXOAYsing1.43Å1.40Å
OAYCATsing1.43Å1.40Å
CACHAC1sing1.08Å1.08Å
NAAHAA1sing0.97Å1.00Å
NAAHAA2sing0.97Å1.00Å
CAJHAJ1sing1.08Å1.08Å
CAZHAZ2sing1.09Å1.10Å
CAZHAZ1sing1.09Å1.10Å
CAVHAV1sing1.09Å1.10Å
CAVHAV2sing1.09Å1.10Å
CBDHBD1sing1.09Å1.10Å
CBDHBD2sing1.09Å1.10Å
CBBHBB1sing1.09Å1.10Å
CBBHBB2sing1.09Å1.10Å
OBCHBC1sing0.97Å0.95Å
CASHAS2sing1.09Å1.10Å
CASHAS1sing1.09Å1.10Å
CATHAT2sing1.09Å1.10Å
CATHAT1sing1.09Å1.10Å
CAXHAX1sing1.09Å1.10Å
CAXHAX2sing1.09Å1.10Å
CAWHAW1sing1.09Å1.10Å
CAWHAW2sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
FABCAGFAF105.1°109.4°
FABCAGFAK103.0°109.5°
FABCAGCAH115.1°109.5°
FAFCAGFAK103.9°109.5°
FAFCAGCAH112.8°109.5°
FAKCAGCAH115.5°109.5°
CAGCAHCAC115.7°120.8°
CAGCAHCAI119.3°120.8°
CBACAVNAU93.0°87.9°
CAVCBACBB112.6°114.2°
CAVCBACBD112.4°114.2°
CAVCBACAZ84.4°83.6°
CBACAVHAV1113.4°113.4°
CBACAVHAV2113.4°113.5°
CAVNAUCAO134.5°110.9°
CAVNAUCAZ90.0°87.9°
NAUCAVHAV1113.4°113.4°
NAUCAVHAV2113.4°113.5°
CBACBBOBC109.4°109.5°
CBBCBACBD109.9°113.4°
CBBCBACAZ116.2°114.2°
CBACBBHBB1109.5°109.5°
CBACBBHBB2109.5°109.5°
OBCCBBHBB1109.5°109.5°
OBCCBBHBB2109.5°109.4°
CBBOBCHBC1109.5°114.0°
CAHCACCAD119.6°119.3°
CACCAHCAI125.0°118.3°
CAHCACHAC1120.2°120.3°
CACCADNAA122.9°119.6°
CACCADNAE117.3°120.9°
CADCACHAC1120.2°120.4°
CBACBDCL115.7°109.4°
CBDCBACAZ118.9°114.2°
CBACBDHBD1107.9°109.5°
CBACBDHBD2107.9°109.5°
CLCBDHBD1107.9°109.5°
CLCBDHBD2107.9°109.5°
CAHCAICAM128.0°120.4°
CAHCAICAJ109.2°119.1°
CBACAZNAU92.5°87.9°
CBACAZHAZ2113.6°113.5°
CBACAZHAZ1113.6°113.5°
NAACADNAE119.8°119.5°
CADNAAHAA1109.5°119.9°
CADNAAHAA2109.5°120.0°
CADNAECAJ119.4°121.8°
CAONAUCAZ134.2°111.0°
NAUCAONAL122.8°120.0°
NAUCAONAP116.2°120.0°
NAUCAZHAZ2113.5°113.5°
NAUCAZHAZ1113.5°113.4°
CAONALCAM117.8°120.0°
NALCAONAP121.0°120.0°
NALCAMCAI120.6°120.0°
NALCAMNAN122.7°120.0°
CAMCAICAJ122.8°120.4°
CAICAMNAN116.8°120.0°
CAICAJNAE129.4°120.6°
CAICAJHAJ1115.3°119.7°
CAONAPCAQ118.3°120.0°
CAMNANCAQ117.4°120.0°
NAECAJHAJ1115.3°119.7°
NAPCAQNAN122.9°120.0°
NAPCAQNAR113.3°120.0°
NANCAQNAR123.7°120.0°
CAQNARCAW118.2°111.0°
CAQNARCAS120.7°111.1°
NARCAWCAX111.9°109.2°
CAWNARCAS108.6°110.7°
NARCAWHAW1108.9°109.5°
NARCAWHAW2108.9°109.5°
CAWCAXOAY111.4°109.2°
CAWCAXHAX1109.0°109.5°
CAWCAXHAX2109.0°109.5°
CAXCAWHAW1108.9°109.5°
CAXCAWHAW2108.9°109.5°
NARCASCAT111.7°109.3°
NARCASHAS2108.9°109.5°
NARCASHAS1108.9°109.5°
CASCATOAY113.2°109.3°
CATCASHAS2108.9°109.5°
CATCASHAS1108.9°109.5°
CASCATHAT2108.6°109.5°
CASCATHAT1108.5°109.5°
CAXOAYCAT113.4°113.8°
OAYCAXHAX1109.0°109.5°
OAYCAXHAX2109.0°109.5°
OAYCATHAT2108.5°109.5°
OAYCATHAT1108.5°109.6°
HAA1NAAHAA2109.5°120.1°
HAZ2CAZHAZ1109.4°112.8°
HAV1CAVHAV2109.5°112.8°
HBD1CBDHBD2109.5°109.5°
HBB1CBBHBB2109.5°109.5°
HAS2CASHAS1109.5°109.5°
HAT2CATHAT1109.5°109.5°
HAX1CAXHAX2109.5°109.6°
HAW1CAWHAW2109.5°109.6°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
FABCAGFAFFAK107.9°120.0°
FABCAGFAFCAH126.2°120.0°
FABCAGFAKCAH126.4°120.0°
FABCAGCAHCAC19.6°0.2°
FABCAGCAHCAI161.3°180.0°
FAFCAGFAKCAH124.1°120.0°
FAFCAGCAHCAC140.2°119.7°
FAFCAGCAHCAI40.7°60.0°
FAKCAGCAHCAC100.4°120.2°
FAKCAGCAHCAI78.7°60.0°
CAGCAHCACCAI179.1°179.8°
CAGCAHCACCAD179.7°180.0°
CAGCAHCAICAM0.8°0.1°
CAGCAHCAICAJ179.9°179.7°
CAGCAHCACHAC10.3°0.1°
CBACAVNAUHAV1117.2°114.7°
CBACAVNAUHAV2117.1°114.8°
CAVCBACBBCBD126.2°133.1°
CAVCBACBBCAZ95.1°93.8°
CAVCBACBBOBC158.4°180.0°
CAVCBACBDCAZ96.2°93.8°
CAVCBACBDCL102.5°180.0°
CBACAVNAUCAO169.4°138.7°
CBACAVNAUCAZ2.0°27.1°
CAVCBACAZHAZ2118.9°88.7°
CAVCBACAZHAZ1115.2°140.8°
CBACAVHAV1HAV2127.7°130.8°
CAVCBACBDHBD1136.6°60.0°
CAVCBACBDHBD218.4°60.0°
CAVCBACBBHBB138.4°60.0°
CAVCBACBBHBB281.7°60.0°
NAUCAVCBACBB114.3°87.6°
NAUCAVCBACBD120.9°139.7°
CAVNAUCAOCAZ162.4°96.0°
CAVNAUCAONAL71.1°96.0°
CAVNAUCAONAP108.9°84.1°
CAVNAUCAZHAZ2119.0°87.7°
CAVNAUCAZHAZ1115.1°141.9°
NAUCAVHAV1HAV2127.8°130.9°
CBACBBOBCHBB1120.0°120.0°
CBACBBOBCHBB2120.0°120.0°
CBBCBACBDCAZ137.5°133.1°
CBBCBACBDCL131.2°46.9°
CBBCBACAZNAU110.7°87.6°
CBBCBACAZHAZ26.4°157.6°
CBBCBACAZHAZ1132.3°27.1°
CBBCBACAVHAV1128.6°27.1°
CBBCBACAVHAV22.9°157.6°
CBBCBACBDHBD110.3°73.1°
CBBCBACBDHBD2107.9°166.9°
CBACBBHBB1HBB2120.1°120.0°
CBACBBOBCHBC1180.0°180.0°
OBCCBBCBACBD75.4°46.9°
OBCCBBCBACAZ63.3°86.2°
OBCCBBHBB1HBB2120.0°119.9°
CAHCACCADHAC1180.0°180.0°
CAHCACCADNAA179.9°179.9°
CAHCACCADNAE0.2°0.0°
CACCAHCAICAM179.8°179.7°
CACCAHCAICAJ0.8°0.5°
CADCACCAHCAI0.7°0.2°
CACCADNAANAE180.0°179.9°
CACCADNAECAJ0.0°0.0°
CACCADNAAHAA1179.9°0.1°
CACCADNAAHAA260.0°180.0°
CBACBDCLHBD1120.9°120.0°
CBACBDCLHBD2120.9°120.0°
CBDCBACAZNAU114.5°139.7°
CBDCBACAZHAZ2128.5°24.9°
CBDCBACAZHAZ12.6°105.6°
CBDCBACAVHAV13.8°105.6°
CBDCBACAVHAV2121.9°24.9°
CBACBDHBD1HBD2117.2°120.0°
CBDCBACBBHBB1164.6°166.9°
CBDCBACBBHBB244.5°73.1°
CLCBDCBACAZ6.3°86.2°
CLCBDHBD1HBD2117.1°120.1°
CAHCAICAMNAL39.7°179.7°
CAHCAICAMCAJ179.3°179.7°
CAHCAICAMNAN140.6°0.0°
CAHCAICAJNAE0.7°0.6°
CAICAHCACHAC1179.3°179.7°
CAHCAICAJHAJ1179.3°179.7°
CBACAZNAUCAO169.5°138.7°
CBACAZNAUHAZ2117.1°114.8°
CBACAZNAUHAZ1117.1°114.8°
CBACAZHAZ2HAZ1128.0°130.9°
CAZCBACAVHAV1115.3°140.7°
CAZCBACAVHAV2119.0°88.8°
CAZCBACBDHBD1127.2°153.8°
CAZCBACBDHBD2114.6°33.8°
CAZCBACBBHBB156.7°33.8°
CAZCBACBBHBB2176.7°153.9°
NAACADNAECAJ179.9°180.0°
NAACADCACHAC10.1°0.0°
CADNAAHAA1HAA2120.0°180.0°
CADNAECAJCAI0.3°0.3°
NAECADCACHAC1179.8°180.0°
NAECADNAAHAA10.0°180.0°
NAECADNAAHAA2120.0°0.1°
CADNAECAJHAJ1179.7°180.0°
NAUCAONALNAP180.0°179.9°
NAUCAONALCAM179.9°179.9°
NAUCAONAPCAQ179.9°179.8°
CAONAUCAZHAZ273.4°23.9°
CAONAUCAZHAZ152.4°106.5°
CAONAUCAVHAV152.3°106.6°
CAONAUCAVHAV273.4°24.0°
CAZNAUCAONAL126.5°0.1°
CAZNAUCAONAP53.5°180.0°
NAUCAZHAZ2HAZ1128.0°130.7°
CAZNAUCAVHAV1115.2°141.8°
CAZNAUCAVHAV2119.1°87.7°
CAONALCAMCAI179.8°180.0°
CAONALCAMNAN0.1°0.3°
NALCAONAPCAQ0.1°0.3°
NALCAMCAINAN179.7°179.7°
NALCAMCAICAJ141.0°0.0°
CAMNALCAONAP0.1°0.0°
NALCAMNANCAQ0.1°0.3°
CAMCAICAJNAE179.9°179.7°
CAICAMNANCAQ179.8°180.0°
CAMCAICAJHAJ10.1°0.0°
CAJCAICAMNAN38.7°179.7°
CAICAJNAEHAJ1180.0°179.7°
CAONAPCAQNAN0.1°0.3°
CAONAPCAQNAR179.6°179.7°
CAMNANCAQNAP0.1°0.0°
CAMNANCAQNAR179.5°180.0°
NAPCAQNANNAR179.4°180.0°
NAPCAQNARCAW28.3°56.3°
NAPCAQNARCAS165.9°180.0°
NANCAQNARCAW152.3°123.7°
NANCAQNARCAS14.6°0.0°
CAQNARCAWCAS142.3°123.8°
CAQNARCAWCAX164.7°177.6°
CAQNARCASCAT168.4°177.6°
CAQNARCASHAS271.3°62.4°
CAQNARCASHAS148.1°57.7°
CAQNARCAWHAW144.4°57.7°
CAQNARCAWHAW274.9°62.5°
NARCAWCAXHAW1120.4°119.9°
NARCAWCAXHAW2120.4°119.9°
CAWNARCASCAT50.4°58.6°
NARCAWCAXOAY56.5°56.8°
CAWNARCASHAS269.9°61.3°
CAWNARCASHAS1170.7°178.6°
NARCAWCAXHAX163.8°176.7°
NARCAWCAXHAX2176.8°63.1°
NARCAWHAW1HAW2118.9°120.1°
CAXCAWNARCAS52.9°58.6°
CAWCAXOAYHAX1120.3°119.9°
CAWCAXOAYHAX2120.3°120.0°
CAWCAXOAYCAT57.0°58.7°
CAWCAXHAX1HAX2119.1°120.1°
CAXCAWHAW1HAW2118.9°120.2°
NARCASCATHAS2120.3°120.0°
NARCASCATHAS1120.3°119.9°
NARCASCATOAY52.3°56.8°
NARCASHAS2HAS1119.0°120.1°
NARCASCATHAT2172.9°176.8°
NARCASCATHAT168.2°63.1°
CASNARCAWHAW1173.3°178.5°
CASNARCAWHAW267.4°61.3°
CASCATOAYCAX55.4°58.7°
CASCATOAYHAT2120.5°119.9°
CASCATOAYHAT1120.6°119.9°
CATCASHAS2HAS1119.0°120.1°
CASCATHAT2HAT1118.3°120.1°
CAXOAYCATHAT2176.0°178.6°
CAXOAYCATHAT165.1°61.3°
OAYCAXHAX1HAX2119.1°120.1°
OAYCAXCAWHAW1176.9°176.7°
OAYCAXCAWHAW263.8°63.1°
OAYCATCASHAS268.0°63.1°
OAYCATCASHAS1172.7°176.8°
OAYCATHAT2HAT1118.3°120.2°
CATOAYCAXHAX163.3°178.5°
CATOAYCAXHAX2177.3°61.3°
HBB1CBBOBCHBC160.0°60.0°
HBB2CBBOBCHBC160.0°60.0°
HAS2CASCATHAT252.5°56.8°
HAS2CASCATHAT1171.5°176.9°
HAS1CASCATHAT266.8°63.3°
HAS1CASCATHAT152.1°56.8°
HAX1CAXCAWHAW156.6°63.4°
HAX1CAXCAWHAW2175.9°56.8°
HAX2CAXCAWHAW162.8°56.8°
HAX2CAXCAWHAW256.5°177.0°

222415

PDB entries from 2024-07-10

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