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SummaryGeometryRelated PDB entries

6JP

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
OAUCADsing1.36Å1.39Å
OATCAHdoub1.21Å1.24Å
CADCACdoub1.38Å1.41ÅAromatic
CADCAEsing1.40Å1.40ÅAromatic
CACCABsing1.39Å1.41ÅAromatic
CAHCAEsing1.47Å1.43Å
CAHCAIsing1.52Å1.42Å
CAECAFdoub1.41Å1.42ÅAromatic
CABOAVsing1.36Å1.36Å
CABCAAdoub1.39Å1.38ÅAromatic
CAICAJsing1.54Å1.55Å
CAFCAAsing1.38Å1.39ÅAromatic
CAFOAGsing1.35Å1.35Å
CAJOAGsing1.43Å1.47Å
CAJCAKsing1.51Å1.42Å
CAKCANdoub1.38Å1.40ÅAromatic
CAKCAMsing1.38Å1.42ÅAromatic
CANCAOsing1.38Å1.40ÅAromatic
CAMCALdoub1.39Å1.38ÅAromatic
CAOCAPdoub1.38Å1.42ÅAromatic
CALCAPsing1.39Å1.41ÅAromatic
CALOAQsing1.36Å1.35Å
CAPOARsing1.36Å1.40Å
OARCASsing1.43Å1.45Å
CAIH1sing1.09Å1.10Å
CAIH2sing1.09Å1.10Å
OAUH3sing0.97Å0.95Å
CACH4sing1.08Å1.08Å
OAVH5sing0.97Å0.95Å
CAAH6sing1.08Å1.08Å
CAJH7sing1.09Å1.10Å
CAMH8sing1.08Å1.08Å
OAQH9sing0.97Å0.95Å
CASH10sing1.09Å1.10Å
CASH11sing1.09Å1.10Å
CASH12sing1.09Å1.10Å
CAOH13sing1.08Å1.08Å
CANH14sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
OAUCADCAC122.7°120.3°
OAUCADCAE116.9°120.2°
CADOAUH3109.5°114.0°
OATCAHCAE119.4°121.7°
OATCAHCAI119.1°121.7°
CACCADCAE120.4°119.5°
CADCACCAB121.4°120.1°
CADCACH4119.3°119.9°
CADCAECAH123.3°120.7°
CADCAECAF116.4°120.2°
CACCABOAV122.9°119.7°
CACCABCAA118.9°120.7°
CABCACH4119.3°120.0°
CAECAHCAI121.3°116.6°
CAHCAECAF120.3°119.1°
CAHCAICAJ105.5°107.2°
CAHCAIH1110.4°109.9°
CAHCAIH2110.4°110.0°
CAECAFCAA123.5°119.3°
CAECAFOAG117.4°120.8°
OAVCABCAA118.2°119.7°
CABOAVH5109.5°114.0°
CABCAACAF119.4°120.2°
CABCAAH6120.3°119.9°
CAICAJOAG113.2°109.3°
CAICAJCAK119.9°109.4°
CAJCAIH1110.5°109.9°
CAJCAIH2110.5°109.9°
CAICAJH7105.1°109.5°
CAACAFOAG119.0°119.9°
CAFCAAH6120.3°119.9°
CAFOAGCAJ121.2°118.7°
OAGCAJCAK105.4°109.5°
OAGCAJH7105.9°109.5°
CAJCAKCAN123.3°119.9°
CAJCAKCAM117.2°119.9°
CAKCAJH7106.5°109.6°
CANCAKCAM119.3°120.2°
CAKCANCAO119.6°120.1°
CAKCANH14120.2°120.0°
CAKCAMCAL121.0°120.0°
CAKCAMH8119.5°120.0°
CANCAOCAP121.1°120.0°
CANCAOH13119.5°120.0°
CAOCANH14120.2°119.9°
CAMCALCAP120.6°119.9°
CAMCALOAQ120.2°120.0°
CALCAMH8119.5°120.0°
CAOCAPCAL118.3°119.9°
CAOCAPOAR125.7°120.1°
CAPCAOH13119.4°120.0°
CAPCALOAQ119.3°120.1°
CALCAPOAR116.0°120.1°
CALOAQH9109.5°114.0°
CAPOARCAS123.1°117.0°
OARCASH10109.5°109.5°
OARCASH11109.5°109.5°
OARCASH12109.5°109.4°
H1CAIH2109.5°109.9°
H10CASH11109.5°109.5°
H10CASH12109.5°109.4°
H11CASH12109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
OAUCADCACCAE178.9°180.0°
OAUCADCACCAB179.1°179.9°
OAUCADCAECAH0.0°0.6°
OAUCADCAECAF179.2°179.6°
OAUCADCACH40.9°0.1°
OATCAHCAECAD17.3°12.2°
OATCAHCAECAI175.7°180.0°
OATCAHCAECAF163.6°167.6°
OATCAHCAICAJ140.5°139.8°
OATCAHCAIH121.2°20.3°
OATCAHCAIH2100.1°100.7°
CADCACCABH4180.0°180.0°
CACCADCAECAH178.9°179.4°
CACCADCAECAF0.2°0.4°
CADCACCABOAV178.9°179.8°
CADCACCABCAA0.5°0.2°
CACCADOAUH3173.8°90.0°
CAECADCACCAB0.2°0.1°
CADCAECAHCAF179.1°179.8°
CADCAECAHCAI158.4°167.9°
CADCAECAFCAA0.6°0.5°
CADCAECAFOAG178.5°179.2°
CAECADOAUH37.3°90.0°
CAECADCACH4179.8°180.0°
CACCABOAVCAA178.5°180.0°
CACCABCAACAF0.8°0.1°
CACCABOAVH5180.0°90.0°
CACCABCAAH6179.2°180.0°
CAECAHCAICAJ43.8°40.2°
CAHCAECAFCAA178.6°179.3°
CAHCAECAFOAG0.7°1.0°
CAECAHCAIH1163.1°159.6°
CAECAHCAIH275.6°79.3°
CAICAHCAECAF20.7°12.3°
CAHCAICAJH1119.4°119.4°
CAHCAICAJH2119.4°119.5°
CAHCAICAJOAG50.3°58.7°
CAHCAICAJCAK175.7°178.6°
CAHCAIH1H2121.8°121.1°
CAHCAICAJH764.7°61.3°
CAECAFCAACAB0.9°0.3°
CAECAFCAAOAG177.9°179.6°
CAECAFOAGCAJ11.0°22.7°
CAECAFCAAH6179.1°179.7°
OAVCABCAACAF179.3°179.9°
OAVCABCACH41.0°0.2°
OAVCABCAAH60.6°0.0°
CABCAACAFH6180.0°180.0°
CABCAACAFOAG178.8°179.4°
CAACABCACH4179.5°179.8°
CAACABOAVH51.5°90.0°
CAICAJOAGCAF37.5°52.6°
CAICAJOAGCAK132.9°119.9°
CAICAJOAGH7114.5°119.9°
CAICAJCAKH7118.8°120.0°
CAICAJCAKCAN38.7°85.0°
CAICAJCAKCAM147.1°94.8°
CAJCAIH1H2121.8°121.1°
CAACAFOAGCAJ171.0°157.7°
CAFOAGCAJCAK170.4°172.5°
OAGCAFCAAH61.2°0.6°
CAFOAGCAJH777.0°67.3°
OAGCAJCAKH7112.2°120.1°
OAGCAJCAKCAN167.7°34.8°
OAGCAJCAKCAM18.1°145.4°
OAGCAJCAIH1169.7°178.1°
OAGCAJCAIH269.1°60.8°
CAJCAKCANCAM174.1°179.8°
CAJCAKCANCAO176.4°179.7°
CAJCAKCAMCAL177.7°180.0°
CAKCAJCAIH164.9°62.0°
CAKCAJCAIH256.3°59.1°
CAJCAKCAMH82.3°0.1°
CAJCAKCANH143.5°0.1°
CAKCANCAOH14180.0°179.8°
CANCAKCAMCAL3.2°0.2°
CAKCANCAOCAP0.4°0.5°
CANCAKCAJH780.1°154.9°
CANCAKCAMH8176.8°179.8°
CAKCANCAOH13179.6°179.8°
CAMCAKCANCAO2.3°0.4°
CAKCAMCALH8180.0°180.0°
CAKCAMCALCAP2.2°0.1°
CAKCAMCALOAQ176.3°179.9°
CAMCAKCAJH794.1°25.2°
CAMCAKCANH14177.7°179.8°
CANCAOCAPH13180.0°179.8°
CANCAOCAPCAL0.6°0.2°
CANCAOCAPOAR178.4°179.7°
CAMCALCAPCAO0.2°0.0°
CAMCALCAPOAQ178.5°180.0°
CAMCALCAPOAR179.4°180.0°
CAMCALOAQH9180.0°90.0°
CAOCAPCALOAR179.1°179.9°
CAOCAPCALOAQ178.2°179.9°
CAOCAPOARCAS13.2°0.0°
CAPCAOCANH14179.5°179.8°
CALCAPOARCAS165.8°180.0°
CAPCALCAMH8177.8°180.0°
CAPCALOAQH91.5°90.0°
CALCAPCAOH13179.4°180.0°
OAQCALCAPOAR0.9°0.0°
OAQCALCAMH83.7°0.0°
CAPOARCASH10180.0°180.0°
CAPOARCASH1160.0°60.0°
CAPOARCASH1260.0°60.0°
OARCAPCAOH131.6°0.1°
OARCASH10H11120.0°120.1°
OARCASH10H12120.0°119.9°
OARCASH11H12120.0°120.0°
H1CAICAJH754.6°58.1°
H2CAICAJH7175.9°179.2°
H10CASH11H12120.0°120.0°
H13CAOCANH140.5°0.0°

246704

PDB entries from 2025-12-24

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