Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6JJ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C9C8doub1.39Å1.38ÅAromatic
C9C10sing1.38Å1.39ÅAromatic
C8C7sing1.38Å1.39ÅAromatic
C10C11doub1.39Å1.40ÅAromatic
C7C6doub1.39Å1.39ÅAromatic
C11C6sing1.40Å1.41ÅAromatic
C11C12sing1.48Å1.47Å
C6Osing1.36Å1.40Å
C4C5doub1.38Å1.39ÅAromatic
C4C3sing1.39Å1.39ÅAromatic
C5Csing1.38Å1.38ÅAromatic
NC12doub1.30Å1.29ÅAromatic
NN1sing1.39Å1.37ÅAromatic
C12Ssing1.77Å1.75ÅAromatic
C3Osing1.36Å1.40Å
C3C2doub1.39Å1.39ÅAromatic
CC1doub1.38Å1.38ÅAromatic
C2C1sing1.38Å1.39ÅAromatic
N1C13sing1.38Å1.35ÅAromatic
N1C14sing1.36Å1.36ÅAromatic
SC14sing1.77Å1.74ÅAromatic
C13N2doub1.30Å1.30ÅAromatic
C14N3doub1.31Å1.31ÅAromatic
N2N3sing1.29Å1.39ÅAromatic
C4H1sing1.08Å1.08Å
C5H2sing1.08Å1.08Å
C7H3sing1.08Å1.08Å
C8H4sing1.08Å1.08Å
C9H5sing1.08Å1.08Å
C10H6sing1.08Å1.08Å
C13H7sing1.08Å1.08Å
C2H8sing1.08Å1.08Å
C1H9sing1.08Å1.08Å
CH10sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C8C9C10120.4°120.2°
C9C8C7120.4°120.3°
C9C8H4119.8°119.8°
C8C9H5119.8°119.8°
C9C10C11120.9°120.0°
C10C9H5119.8°119.9°
C9C10H6119.5°120.0°
C8C7C6119.6°120.1°
C8C7H3120.2°119.9°
C7C8H4119.8°119.9°
C10C11C6117.8°119.6°
C10C11C12118.2°120.2°
C11C10H6119.5°120.1°
C7C6C11120.9°119.8°
C7C6O119.5°120.1°
C6C7H3120.2°120.0°
C6C11C12124.0°120.2°
C11C6O119.6°120.1°
C11C12N122.0°127.1°
C11C12S122.3°127.0°
C6OC3123.3°118.0°
C5C4C3119.3°119.9°
C4C5C120.4°120.1°
C5C4H1120.4°120.0°
C4C5H2119.8°120.0°
C4C3O120.7°120.1°
C4C3C2120.6°119.9°
C3C4H1120.3°120.1°
C5CC1119.9°120.1°
CC5H2119.8°120.0°
C5CH10120.1°120.0°
C12NN1110.5°119.1°
NC12S115.7°105.9°
NN1C13138.8°140.4°
NN1C14116.1°115.1°
C12SC1487.8°94.4°
OC3C2118.6°120.0°
C3C2C1119.3°119.9°
C3C2H8120.3°120.0°
CC1C2120.4°120.1°
CC1H9119.8°120.0°
C1CH10120.0°119.9°
C1C2H8120.3°120.0°
C2C1H9119.8°119.9°
C13N1C14105.1°104.5°
N1C13N2110.6°107.7°
N1C13H7124.7°126.2°
N1C14S110.0°105.6°
N1C14N3110.6°108.3°
SC14N3139.4°146.1°
C13N2N3107.4°110.0°
N2C13H7124.7°126.1°
C14N3N2106.3°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C8C9C10H5180.0°180.0°
C9C8C7H4180.0°179.9°
C8C9C10C110.3°0.3°
C9C8C7C60.2°0.1°
C9C8C7H3179.8°179.9°
C8C9C10H6179.7°180.0°
C10C9C8C70.1°0.0°
C9C10C11H6180.0°179.7°
C9C10C11C60.5°0.6°
C9C10C11C12179.6°180.0°
C10C9C8H4179.9°179.9°
C8C7C6H3180.0°180.0°
C8C7C6C110.4°0.2°
C8C7C6O177.1°179.9°
C7C8C9H5179.9°180.0°
C10C11C6C70.5°0.5°
C10C11C6C12179.1°179.4°
C10C11C6O177.0°179.7°
C10C11C12N3.4°179.9°
C10C11C12S175.9°0.1°
C11C10C9H5179.8°179.7°
C7C6C11O177.5°179.8°
C7C6C11C12179.6°179.9°
C7C6OC325.2°0.5°
C6C7C8H4179.8°180.0°
C6C11C12N175.7°0.7°
C6C11C12S5.0°179.4°
C11C6OC3157.2°179.8°
C11C6C7H3179.6°179.8°
C6C11C10H6179.5°179.7°
C12C11C6O2.1°0.3°
C11C12NS179.3°179.9°
C11C12NN1179.8°179.9°
C11C12SC14179.8°179.9°
C12C11C10H60.4°0.3°
C6OC3C473.2°89.9°
C6OC3C2107.7°90.1°
OC6C7H32.9°0.0°
C5C4C3H1180.0°179.8°
C4C5CH2180.0°179.9°
C5C4C3O179.3°180.0°
C5C4C3C20.3°0.0°
C4C5CC10.3°0.1°
C4C5CH10179.7°180.0°
C3C4C5C0.1°0.1°
C4C3OC2179.1°180.0°
C4C3C2C10.4°0.0°
C3C4C5H2179.9°179.9°
C4C3C2H8179.6°180.0°
C5CC1H10180.0°179.9°
C5CC1C20.2°0.1°
CC5C4H1179.9°179.8°
C5CC1H9179.8°179.9°
C12NN1C13177.6°180.0°
C12NN1C140.1°0.3°
NC12SC140.5°0.1°
N1NC12S0.4°0.2°
NN1C13C14177.8°179.7°
NN1C14S0.3°0.2°
NN1C13N2177.4°179.7°
NN1C14N3178.0°179.8°
NN1C13H72.6°0.3°
C12SC14N10.4°0.1°
C12SC14N3177.1°180.0°
OC3C2C1179.5°180.0°
OC3C4H10.7°0.2°
OC3C2H80.5°0.0°
C3C2C1C0.2°0.1°
C3C2C1H8180.0°180.0°
C2C3C4H1179.7°179.7°
C3C2C1H9179.8°180.0°
CC1C2H9180.0°180.0°
C1CC5H2179.7°180.0°
CC1C2H8179.8°180.0°
C2C1CH10179.9°180.0°
C13N1C14S178.7°180.0°
N1C13N2H7180.0°179.9°
C13N1C14N30.4°0.0°
N1C13N2N30.3°0.1°
N1C14SN3177.5°179.9°
C14N1C13N20.4°0.0°
N1C14N3N20.2°0.1°
C14N1C13H7179.6°179.9°
SC14N3N2177.8°180.0°
C13N2N3C140.0°0.1°
N3N2C13H7179.8°180.0°
H1C4C5H20.1°0.3°
H2C5CH100.3°0.1°
H3C7C8H40.2°0.1°
H4C8C9H50.1°0.1°
H5C9C10H60.2°0.0°
H8C2C1H90.2°0.0°
H9C1CH100.2°0.1°

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon