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6FM

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N6C6sing1.38Å1.45Å
C6N1doub1.33Å1.33ÅAromatic
C6C5sing1.41Å1.37ÅAromatic
N7C5sing1.36Å1.44ÅAromatic
N7C8doub1.30Å1.36ÅAromatic
N1C2sing1.32Å1.34ÅAromatic
C5C4doub1.40Å1.39ÅAromatic
C8N9sing1.36Å1.22ÅAromatic
C2F32sing1.35Å1.36Å
C2N3doub1.32Å1.33ÅAromatic
C4N9sing1.37Å1.22ÅAromatic
C4N3sing1.33Å1.31ÅAromatic
N9C1'sing1.47Å1.41Å
OP1PAsing1.61Å1.46Å
C1'C2'sing1.55Å1.50Å
C1'O4'sing1.44Å1.50Å
PAOP2sing1.61Å1.65Å
PAO5'sing1.61Å1.65Å
C5'C4'sing1.53Å1.53Å
C5'O5'sing1.43Å1.40Å
C2'C3'sing1.55Å1.45Å
O4'C4'sing1.44Å1.46Å
C3'C4'sing1.54Å1.49Å
C3'O3'sing1.43Å1.46Å
C4'C33sing1.47Å1.51Å
C33C34trip1.17Å1.19Å
N6H1sing0.97Å1.00Å
N6H2sing0.97Å1.00Å
C8H3sing1.08Å1.08Å
C1'H4sing1.09Å1.10Å
C2'H5sing1.09Å1.10Å
C2'H6sing1.09Å1.10Å
C3'H7sing1.09Å1.10Å
O3'H8sing0.97Å0.95Å
C34H9sing1.05Å1.06Å
C5'H10sing1.09Å1.10Å
C5'H11sing1.09Å1.10Å
OP2HOP3sing0.97Å0.95Å
OP1HOP2sing0.97Å0.95Å
PAOP3doub1.48Å56.73Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N6C6N1121.1°120.7°
N6C6C5121.0°120.8°
C6N6H1109.5°120.0°
C6N6H2109.5°120.0°
N1C6C5117.9°118.5°
C6N1C2121.6°121.2°
C6C5N7136.4°134.6°
C6C5C4119.3°118.2°
C5N7C8104.6°109.4°
N7C5C4104.3°107.2°
N7C8N9105.5°109.9°
N7C8H3127.2°125.0°
N1C2F32119.6°118.8°
N1C2N3120.9°122.4°
C5C4N9104.2°106.0°
C5C4N3120.2°119.1°
C8N9C4121.4°107.5°
C8N9C1'119.5°126.2°
N9C8H3127.3°125.0°
F32C2N3119.5°118.8°
C2N3C4120.1°120.6°
N9C4N3135.6°134.9°
C4N9C1'119.2°126.3°
N9C1'C2'109.7°110.6°
N9C1'O4'110.1°110.6°
N9C1'H4110.2°110.5°
OP1PAOP2111.4°109.5°
OP1PAO5'111.4°109.5°
PAOP1HOP2109.5°114.0°
OP1PAOP3120.9°109.5°
C2'C1'O4'108.7°103.5°
C1'C2'C3'104.8°102.1°
C2'C1'H4109.1°110.6°
C1'C2'H5110.6°110.9°
C1'C2'H6110.6°110.9°
C1'O4'C4'105.0°107.0°
O4'C1'H4109.0°110.8°
OP2PAO5'110.5°109.4°
PAOP2HOP3109.5°114.0°
OP2PAOP3122.4°109.5°
PAO5'C5'118.0°123.0°
O5'PAOP329.1°109.5°
C4'C5'O5'109.7°109.5°
C5'C4'O4'109.7°110.0°
C5'C4'C3'109.7°109.9°
C5'C4'C33109.9°109.8°
C4'C5'H10109.4°109.5°
C4'C5'H11109.4°109.4°
O5'C5'H10109.4°109.5°
O5'C5'H11109.4°109.5°
C2'C3'C4'106.7°104.2°
C2'C3'O3'110.2°110.5°
C3'C2'H5110.6°110.9°
C3'C2'H6110.6°110.9°
C2'C3'H7109.8°110.5°
O4'C4'C3'107.6°107.3°
O4'C4'C33109.5°109.9°
C4'C3'O3'111.1°110.5°
C3'C4'C33110.4°109.9°
C4'C3'H7109.3°110.5°
O3'C3'H7109.7°110.5°
C3'O3'H8109.5°114.0°
C4'C33C34179.8°179.9°
C33C34H9180.0°179.9°
H1N6H2109.5°120.0°
H5C2'H6109.5°110.8°
H10C5'H11109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N6C6N1C5180.0°179.7°
N6C6C5N70.1°0.3°
N6C6N1C2180.0°180.0°
N6C6C5C4180.0°179.7°
C6N6H1H2120.0°180.0°
N1C6C5N7179.9°179.9°
N1C6C5C40.0°0.6°
C6N1C2F32180.0°180.0°
C6N1C2N30.0°0.0°
N1C6N6H10.0°0.0°
N1C6N6H2120.0°179.9°
C6C5N7C4179.9°179.5°
C6C5N7C8180.0°180.0°
C5C6N1C20.0°0.3°
C6C5C4N9180.0°179.6°
C6C5C4N30.0°0.6°
C5C6N6H1180.0°179.7°
C5C6N6H260.0°0.3°
C5N7C8N90.1°0.8°
N7C5C4N90.0°0.0°
N7C5C4N3179.9°179.8°
C5N7C8H3179.9°180.0°
C8N7C5C40.1°0.5°
N7C8N9H3180.0°179.2°
N7C8N9C40.1°0.8°
N7C8N9C1'180.0°179.9°
N1C2F32N3179.9°180.0°
N1C2N3C40.0°0.0°
C5C4N9C80.0°0.5°
C5C4N3C20.0°0.3°
C5C4N9N3180.0°179.8°
C5C4N9C1'179.9°179.8°
C8N9C4C1'179.9°179.3°
C8N9C4N3180.0°179.3°
C8N9C1'C2'96.4°94.2°
C8N9C1'O4'23.2°19.9°
C8N9C1'H4143.5°142.9°
F32C2N3C4180.0°180.0°
C2N3C4N9180.0°180.0°
C4N9C1'C2'83.5°85.0°
C4N9C1'O4'156.9°161.0°
C4N9C8H3179.9°180.0°
C4N9C1'H436.6°37.9°
N3C4N9C1'0.1°0.0°
N9C1'C2'O4'120.4°118.5°
N9C1'C2'H4120.8°122.8°
N9C1'O4'H4121.1°122.9°
N9C1'C2'C3'105.9°155.6°
N9C1'O4'C4'122.2°158.6°
C1'N9C8H30.0°0.7°
N9C1'C2'H5134.8°86.2°
N9C1'C2'H613.4°37.3°
OP1PAOP2O5'124.4°120.0°
OP1PAOP2OP3154.3°120.0°
OP1PAO5'OP3115.3°120.0°
OP1PAO5'C5'8.2°65.0°
OP1PAOP2HOP3180.0°59.9°
C2'C1'O4'H4118.8°118.6°
C1'C2'C3'H5119.2°118.2°
C1'C2'C3'H6119.3°118.2°
C2'C1'O4'C4'2.0°40.1°
C1'C2'C3'C4'25.3°20.9°
C1'C2'C3'O3'146.1°97.8°
C1'C2'H5H6122.2°123.6°
C1'C2'C3'H793.1°139.5°
C1'O4'C4'C5'137.0°146.1°
O4'C1'C2'C3'14.5°37.0°
C1'O4'C4'C3'17.7°26.5°
C1'O4'C4'C33102.3°92.9°
O4'C1'C2'H5104.7°155.3°
O4'C1'C2'H6133.8°81.2°
OP2PAO5'OP3120.3°120.0°
OP2PAO5'C5'132.6°175.0°
OP2PAOP1HOP2180.0°60.0°
PAO5'C5'C4'146.7°180.0°
PAO5'C5'H1093.2°60.0°
PAO5'C5'H1126.7°60.1°
O5'PAOP2HOP355.6°179.9°
O5'PAOP1HOP256.1°60.0°
C4'C5'O5'H10120.0°120.0°
C4'C5'O5'H11120.0°119.9°
C5'C4'C3'C2'146.9°121.6°
C5'C4'O4'C3'119.3°119.5°
C5'C4'O4'C33120.7°121.0°
C5'C4'C3'C33121.3°121.0°
C5'C4'C3'O3'92.9°119.7°
C5'C4'C33C3438.8°143.5°
C5'C4'C3'H728.2°3.0°
C4'C5'H10H11119.9°119.9°
O5'C5'C4'O4'79.7°67.0°
O5'C5'C4'C3'162.3°175.0°
O5'C5'C4'C3340.8°54.0°
O5'C5'H10H11119.9°120.0°
C5'O5'PAOP3107.1°55.0°
C2'C3'C4'O4'27.6°2.0°
C2'C3'C4'O3'120.2°118.7°
C2'C3'C4'H7118.7°118.7°
C2'C3'O3'H7120.9°122.6°
C2'C3'C4'C3391.8°117.4°
C3'C2'C1'H4133.3°81.7°
C3'C2'H5H6122.2°123.7°
C2'C3'O3'H8180.0°61.4°
O4'C4'C3'C33119.5°119.4°
O4'C4'C3'O3'147.8°120.7°
O4'C4'C33C3481.7°22.3°
C4'O4'C1'H4116.7°78.5°
O4'C4'C3'H791.0°116.7°
O4'C4'C5'H10160.2°172.9°
O4'C4'C5'H1140.3°52.9°
C4'C3'O3'H7121.0°122.6°
C3'C4'C33C34160.0°95.5°
C4'C3'C2'H593.9°139.1°
C4'C3'C2'H6144.6°97.3°
C4'C3'O3'H861.9°176.2°
C3'C4'C5'H1042.3°55.0°
C3'C4'C5'H1177.6°65.0°
O3'C3'C4'C3328.3°1.3°
O3'C3'C2'H526.8°20.4°
O3'C3'C2'H694.7°144.0°
C33C4'C3'H7149.5°123.9°
C4'C33C34H9152.9°137.5°
C33C4'C5'H1079.3°66.0°
C33C4'C5'H11160.8°174.0°
H4C1'C2'H514.0°36.6°
H4C1'C2'H6107.4°160.1°
H5C2'C3'H7147.7°102.2°
H6C2'C3'H726.2°21.4°
H7C3'O3'H859.1°61.2°
HOP3OP2PAOP325.8°60.1°
HOP2OP1PAOP325.3°180.0°

248636

PDB entries from 2026-02-04

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