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Summary Geometry Related PDB entries

6FB

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C1	C	doub	1.36Å	1.36Å	Aromatic
C1	N	sing	1.33Å	1.34Å	Aromatic
C	C10	sing	1.41Å	1.41Å	Aromatic
N	C2	doub	1.31Å	1.34Å	Aromatic
C10	C9	doub	1.39Å	1.39Å	Aromatic
C10	C3	sing	1.47Å	1.40Å	Aromatic
C9	C8	sing	1.39Å	1.39Å	Aromatic
C2	C3	sing	1.41Å	1.41Å	Aromatic
C3	C4	doub	1.39Å	1.39Å	Aromatic
C8	N3	doub	1.34Å	1.37Å	Aromatic
C8	C5	sing	1.47Å	1.41Å	Aromatic
N3	C7	sing	1.32Å	1.34Å	Aromatic
C4	C5	sing	1.39Å	1.39Å	Aromatic
C5	C6	doub	1.41Å	1.40Å	Aromatic
C7	N2	sing	1.38Å	1.33Å
C7	N1	doub	1.33Å	1.34Å	Aromatic
C6	N1	sing	1.31Å	1.32Å	Aromatic
C4	H1	sing	1.08Å	1.08Å
C6	H2	sing	1.08Å	1.08Å
N2	H3	sing	0.97Å	1.00Å
N2	H4	sing	0.97Å	1.00Å
C9	H5	sing	1.08Å	1.08Å
C	H6	sing	1.08Å	1.08Å
C2	H7	sing	1.08Å	1.08Å
C1	H8	sing	1.08Å	1.08Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C	C1	N	124.0°	122.6°
C1	C	C10	119.2°	118.6°
C1	C	H6	120.4°	120.7°
C	C1	H8	118.0°	118.7°
C1	N	C2	117.2°	123.6°
N	C1	H8	118.0°	118.7°
C	C10	C9	122.2°	122.0°
C	C10	C3	118.4°	117.6°
C10	C	H6	120.4°	120.7°
N	C2	C3	124.2°	119.7°
N	C2	H7	117.9°	120.2°
C9	C10	C3	119.2°	120.4°
C10	C9	C8	121.4°	119.4°
C10	C9	H5	119.3°	120.4°
C10	C3	C2	116.8°	117.9°
C10	C3	C4	119.1°	120.2°
C9	C8	N3	119.0°	121.7°
C9	C8	C5	119.3°	120.2°
C8	C9	H5	119.3°	120.3°
C2	C3	C4	124.0°	121.8°
C3	C2	H7	117.9°	120.1°
C3	C4	C5	122.2°	119.2°
C3	C4	H1	118.9°	120.4°
N3	C8	C5	121.7°	118.1°
C8	N3	C7	117.0°	120.1°
C8	C5	C4	118.7°	120.5°
C8	C5	C6	114.1°	117.8°
N3	C7	N2	117.4°	118.3°
N3	C7	N1	125.7°	123.4°
C4	C5	C6	127.1°	121.7°
C5	C4	H1	118.9°	120.4°
C5	C6	N1	125.1°	118.3°
C5	C6	H2	117.5°	120.8°
N2	C7	N1	116.8°	118.3°
C7	N2	H3	109.5°	120.0°
C7	N2	H4	109.5°	120.0°
C7	N1	C6	116.2°	122.3°
N1	C6	H2	117.4°	120.9°
H3	N2	H4	109.5°	120.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C	C1	N	H8	180.0°	179.9°
C1	C	C10	H6	180.0°	180.0°
C	C1	N	C2	4.0°	0.3°
C1	C	C10	C9	178.6°	180.0°
C1	C	C10	C3	1.9°	0.3°
N	C1	C	C10	1.8°	0.0°
C1	N	C2	C3	2.6°	0.3°
N	C1	C	H6	178.3°	180.0°
C1	N	C2	H7	177.4°	179.7°
C	C10	C9	C3	176.7°	179.7°
C	C10	C9	C8	175.3°	180.0°
C	C10	C3	C2	3.0°	0.3°
C	C10	C3	C4	174.3°	179.7°
C	C10	C9	H5	4.7°	0.0°
C10	C	C1	H8	178.2°	180.0°
N	C2	C3	C10	0.8°	0.0°
N	C2	C3	H7	180.0°	180.0°
N	C2	C3	C4	176.4°	179.5°
C2	N	C1	H8	176.0°	179.7°
C10	C9	C8	H5	180.0°	180.0°
C9	C10	C3	C2	179.8°	180.0°
C9	C10	C3	C4	2.6°	0.6°
C10	C9	C8	N3	177.3°	180.0°
C10	C9	C8	C5	1.1°	0.1°
C9	C10	C	H6	1.4°	0.0°
C3	C10	C9	C8	1.4°	0.3°
C10	C3	C2	C4	177.1°	179.4°
C10	C3	C4	C5	1.2°	0.6°
C10	C3	C4	H1	178.8°	179.8°
C3	C10	C9	H5	178.6°	179.7°
C3	C10	C	H6	178.1°	179.7°
C10	C3	C2	H7	179.2°	180.0°
C9	C8	N3	C5	178.4°	179.9°
C9	C8	N3	C7	179.6°	179.9°
C9	C8	C5	C4	2.5°	0.1°
C9	C8	C5	C6	178.7°	180.0°
C2	C3	C4	C5	178.2°	180.0°
C2	C3	C4	H1	1.8°	0.3°
C3	C4	C5	C8	1.4°	0.3°
C3	C4	C5	H1	180.0°	179.7°
C3	C4	C5	C6	180.0°	179.7°
C4	C3	C2	H7	3.7°	0.6°
N3	C8	C5	C4	175.8°	180.0°
N3	C8	C5	C6	3.0°	0.0°
C8	N3	C7	N2	177.6°	180.0°
C8	N3	C7	N1	0.6°	0.0°
N3	C8	C9	H5	2.8°	0.0°
C5	C8	N3	C7	2.0°	0.0°
C8	C5	C4	C6	178.7°	180.0°
C8	C5	C6	N1	1.6°	0.0°
C8	C5	C4	H1	178.6°	180.0°
C8	C5	C6	H2	178.4°	179.9°
C5	C8	C9	H5	178.8°	179.9°
N3	C7	N2	N1	177.2°	180.0°
N3	C7	N1	C6	2.0°	0.1°
N3	C7	N2	H3	0.0°	180.0°
N3	C7	N2	H4	120.0°	0.0°
C4	C5	C6	N1	177.1°	180.0°
C4	C5	C6	H2	2.9°	0.0°
C5	C6	N1	C7	0.8°	0.1°
C5	C6	N1	H2	180.0°	180.0°
C6	C5	C4	H1	0.0°	0.0°
N2	C7	N1	C6	179.0°	180.0°
C7	N2	H3	H4	120.0°	180.0°
C7	N1	C6	H2	179.3°	179.9°
N1	C7	N2	H3	177.3°	0.0°
N1	C7	N2	H4	62.7°	180.0°
H6	C	C1	H8	1.8°	0.0°

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PDB entries from 2024-07-10

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