6DN

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O2	CX2	doub	0.00Å	1.24Å
NZ	CE	sing	0.00Å	1.48Å
NZ	CX1	sing	0.00Å	1.46Å
CX2	O1	sing	0.00Å	1.27Å
CX2	CX1	sing	0.00Å	1.52Å
CE	CD	sing	0.00Å	1.53Å
CD	CG	sing	0.00Å	1.55Å
CG	CB	sing	0.00Å	1.55Å
CB	CA	sing	0.00Å	1.53Å
CA	C	sing	0.00Å	1.50Å
CA	N	sing	0.00Å	1.46Å
C	O	doub	0.00Å	1.25Å
C	OXT	sing	0.00Å	1.33Å
O1	H1	sing	0.00Å	0.95Å
CB	HB2	sing	0.00Å	1.10Å
CB	HB3	sing	0.00Å	1.10Å
CA	HA	sing	0.00Å	1.10Å
N	H	sing	0.00Å	1.00Å
N	H2	sing	0.00Å	1.00Å
CG	HG2	sing	0.00Å	1.10Å
CG	HG3	sing	0.00Å	1.10Å
CD	HD2	sing	0.00Å	1.10Å
CD	HD3	sing	0.00Å	1.10Å
CE	HE2	sing	0.00Å	1.10Å
CE	HE3	sing	0.00Å	1.10Å
NZ	HZ1	sing	0.00Å	1.00Å
CX1	H16	sing	0.00Å	1.10Å
CX1	H17	sing	0.00Å	1.10Å
OXT	HXT	sing	0.00Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O2	CX2	O1	122.1°	90.0°
O2	CX2	CX1	118.3°	90.0°
CE	NZ	CX1	123.8°	90.0°
NZ	CE	CD	118.0°	90.0°
NZ	CE	HE2	107.3°	90.0°
NZ	CE	HE3	107.3°	90.0°
CE	NZ	HZ1	105.8°	90.0°
NZ	CX1	CX2	117.4°	90.0°
CX1	NZ	HZ1	105.8°	90.0°
NZ	CX1	H16	107.4°	90.0°
NZ	CX1	H17	107.4°	90.0°
O1	CX2	CX1	119.6°	90.0°
CX2	O1	H1	109.5°	90.0°
CX2	CX1	H16	107.5°	90.0°
CX2	CX1	H17	107.5°	90.0°
CE	CD	CG	113.8°	90.0°
CE	CD	HD2	108.4°	90.0°
CE	CD	HD3	108.4°	90.0°
CD	CE	HE2	107.3°	90.0°
CD	CE	HE3	107.3°	90.0°
CD	CG	CB	112.5°	90.0°
CD	CG	HG2	108.7°	90.0°
CD	CG	HG3	108.7°	90.0°
CG	CD	HD2	108.4°	90.0°
CG	CD	HD3	108.4°	90.0°
CG	CB	CA	116.9°	90.0°
CG	CB	HB2	107.6°	90.0°
CG	CB	HB3	107.6°	90.0°
CB	CG	HG2	108.7°	90.0°
CB	CG	HG3	108.7°	90.0°
CB	CA	C	110.0°	90.0°
CB	CA	N	111.9°	90.0°
CA	CB	HB2	107.6°	90.0°
CA	CB	HB3	107.6°	90.0°
CB	CA	HA	110.5°	90.0°
C	CA	N	101.8°	90.0°
CA	C	O	119.3°	90.0°
CA	C	OXT	116.4°	90.0°
C	CA	HA	110.9°	90.0°
N	CA	HA	111.5°	90.0°
CA	N	H	109.5°	90.0°
CA	N	H2	109.5°	90.0°
O	C	OXT	124.1°	90.0°
C	OXT	HXT	109.5°	90.0°
HB2	CB	HB3	109.4°	90.0°
H	N	H2	109.5°	90.0°
HG2	CG	HG3	109.5°	90.0°
HD2	CD	HD3	109.5°	90.0°
HE2	CE	HE3	109.5°	90.0°
H16	CX1	H17	109.5°	90.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O2	CX2	CX1	NZ	48.7°	90.0°
O2	CX2	O1	CX1	179.5°	90.0°
O2	CX2	O1	H1	0.0°	90.0°
O2	CX2	CX1	H16	72.5°	90.0°
O2	CX2	CX1	H17	169.8°	90.0°
CE	NZ	CX1	HZ1	121.9°	90.0°
CE	NZ	CX1	CX2	158.8°	90.0°
NZ	CE	CD	HE2	121.2°	90.0°
NZ	CE	CD	HE3	121.2°	90.0°
NZ	CE	CD	CG	152.8°	90.0°
NZ	CE	CD	HD2	86.5°	90.0°
NZ	CE	CD	HD3	32.2°	90.0°
NZ	CE	HE2	HE3	116.1°	90.0°
CE	NZ	CX1	H16	37.7°	90.0°
CE	NZ	CX1	H17	80.0°	90.0°
NZ	CX1	CX2	O1	131.8°	90.0°
NZ	CX1	CX2	H16	121.1°	90.0°
NZ	CX1	CX2	H17	121.1°	90.0°
CX1	NZ	CE	CD	64.9°	90.0°
CX1	NZ	CE	HE2	56.3°	90.0°
CX1	NZ	CE	HE3	173.9°	90.0°
NZ	CX1	H16	H17	116.4°	90.0°
O1	CX2	CX1	H16	107.1°	90.0°
O1	CX2	CX1	H17	10.7°	90.0°
CX1	CX2	O1	H1	179.5°	90.0°
CX2	CX1	NZ	HZ1	79.2°	90.0°
CX2	CX1	H16	H17	116.4°	90.0°
CE	CD	CG	HD2	120.6°	90.0°
CE	CD	CG	HD3	120.6°	90.0°
CE	CD	CG	CB	151.5°	90.0°
CE	CD	CG	HG2	88.1°	90.0°
CE	CD	CG	HG3	31.0°	90.0°
CE	CD	HD2	HD3	118.1°	90.0°
CD	CE	HE2	HE3	116.2°	90.0°
CD	CE	NZ	HZ1	57.0°	90.0°
CD	CG	CB	HG2	120.5°	90.0°
CD	CG	CB	HG3	120.4°	90.0°
CD	CG	CB	CA	180.0°	90.0°
CD	CG	CB	HB2	58.9°	90.0°
CD	CG	CB	HB3	58.9°	90.0°
CD	CG	HG2	HG3	118.6°	90.0°
CG	CD	HD2	HD3	118.0°	90.0°
CG	CD	CE	HE2	31.6°	90.0°
CG	CD	CE	HE3	86.0°	90.0°
CG	CB	CA	HB2	121.1°	90.0°
CG	CB	CA	HB3	121.1°	90.0°
CG	CB	CA	C	170.0°	90.0°
CG	CB	CA	N	77.7°	90.0°
CG	CB	HB2	HB3	116.6°	90.0°
CG	CB	CA	HA	47.3°	90.0°
CB	CG	HG2	HG3	118.7°	90.0°
CB	CG	CD	HD2	30.9°	90.0°
CB	CG	CD	HD3	87.9°	90.0°
CB	CA	C	N	118.7°	90.0°
CB	CA	C	HA	122.5°	90.0°
CB	CA	N	HA	124.3°	90.0°
CB	CA	C	O	88.6°	90.0°
CB	CA	C	OXT	95.0°	90.0°
CA	CB	HB2	HB3	116.6°	90.0°
CB	CA	N	H	180.0°	90.0°
CB	CA	N	H2	60.0°	90.0°
CA	CB	CG	HG2	59.6°	90.0°
CA	CB	CG	HG3	59.5°	90.0°
C	CA	N	HA	118.3°	90.0°
CA	C	O	OXT	176.1°	90.0°
C	CA	CB	HB2	48.9°	90.0°
C	CA	CB	HB3	68.9°	90.0°
C	CA	N	H	62.6°	90.0°
C	CA	N	H2	57.4°	90.0°
CA	C	OXT	HXT	176.2°	90.0°
N	CA	C	O	30.1°	90.0°
N	CA	C	OXT	146.2°	90.0°
N	CA	CB	HB2	161.3°	90.0°
N	CA	CB	HB3	43.4°	90.0°
CA	N	H	H2	120.0°	90.0°
O	C	CA	HA	148.9°	90.0°
O	C	OXT	HXT	0.0°	90.0°
OXT	C	CA	HA	27.5°	90.0°
HB2	CB	CA	HA	73.8°	90.0°
HB2	CB	CG	HG2	179.3°	90.0°
HB2	CB	CG	HG3	61.5°	90.0°
HB3	CB	CA	HA	168.4°	90.0°
HB3	CB	CG	HG2	61.5°	90.0°
HB3	CB	CG	HG3	179.4°	90.0°
HA	CA	N	H	55.6°	90.0°
HA	CA	N	H2	175.6°	90.0°
HG2	CG	CD	HD2	151.3°	90.0°
HG2	CG	CD	HD3	32.6°	90.0°
HG3	CG	CD	HD2	89.6°	90.0°
HG3	CG	CD	HD3	151.7°	90.0°
HD2	CD	CE	HE2	152.2°	90.0°
HD2	CD	CE	HE3	34.7°	90.0°
HD3	CD	CE	HE2	89.0°	90.0°
HD3	CD	CE	HE3	153.4°	90.0°
HE2	CE	NZ	HZ1	178.3°	90.0°
HE3	CE	NZ	HZ1	64.2°	90.0°
HZ1	NZ	CX1	H16	159.6°	90.0°
HZ1	NZ	CX1	H17	41.9°	90.0°

Release date:	2017-10-11
Definition date:	2016-03-30
Last modified:	2023-11-03
Release status:	REL
Processing site:	EBI
Derived from:	5J2S