6CN
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O3P | P | doub | 1.48Å | 1.50Å | |
| P | O5' | sing | 1.61Å | 1.61Å | |
| P | O1P | sing | 1.61Å | 1.50Å | |
| O1P | HO1P | sing | 0.97Å | 0.95Å | |
| O2P | P | sing | 1.61Å | 1.51Å | |
| O2P | HO2P | sing | 0.97Å | 0.95Å | |
| C5' | O5' | sing | 1.43Å | 1.45Å | |
| C5' | C4' | sing | 1.53Å | 1.53Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C5' | H5'A | sing | 1.09Å | 1.10Å | |
| C4' | C3' | sing | 1.54Å | 1.52Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| C3' | O3' | sing | 1.43Å | 1.47Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C2' | C3' | sing | 1.55Å | 1.51Å | |
| C2' | O2' | sing | 1.43Å | 1.43Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| O2' | HO2' | sing | 0.97Å | 0.95Å | |
| O4' | C4' | sing | 1.44Å | 1.43Å | |
| O4' | C1' | sing | 1.44Å | 1.45Å | |
| C1' | C2' | sing | 1.54Å | 1.53Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| N1 | C1' | sing | 1.46Å | 1.50Å | |
| C6 | N1 | sing | 1.38Å | 1.32Å | |
| C5 | C6 | doub | 1.36Å | 1.36Å | |
| C5 | H5 | sing | 1.08Å | 1.08Å | |
| C4 | C5 | sing | 1.42Å | 1.36Å | |
| C4 | N3 | sing | 1.35Å | 1.30Å | |
| O4 | C4 | doub | 1.22Å | 1.24Å | |
| N3 | C2 | sing | 1.34Å | 1.34Å | |
| N3 | HN3 | sing | 0.97Å | 1.00Å | |
| C2 | N1 | sing | 1.35Å | 1.39Å | |
| O2 | C2 | doub | 1.22Å | 1.23Å | |
| C7 | C6 | sing | 1.43Å | 1.39Å | |
| N8 | C7 | trip | 1.14Å | 1.13Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O3P | P | O5' | 103.3° | 109.5° |
| O3P | P | O1P | 119.3° | 109.5° |
| O3P | P | O2P | 114.2° | 109.5° |
| O5' | P | O1P | 100.4° | 109.5° |
| O5' | P | O2P | 105.9° | 109.5° |
| P | O5' | C5' | 123.7° | 123.0° |
| P | O1P | HO1P | 109.5° | 114.0° |
| O1P | P | O2P | 111.4° | 109.4° |
| P | O2P | HO2P | 109.5° | 114.0° |
| O5' | C5' | C4' | 106.8° | 109.5° |
| O5' | C5' | H5' | 110.4° | 109.5° |
| O5' | C5' | H5'A | 110.9° | 109.5° |
| C4' | C5' | H5' | 110.4° | 109.4° |
| C4' | C5' | H5'A | 111.0° | 109.5° |
| C5' | C4' | C3' | 111.0° | 110.4° |
| C5' | C4' | H4' | 109.4° | 110.4° |
| C5' | C4' | O4' | 107.4° | 110.4° |
| H5' | C5' | H5'A | 107.4° | 109.4° |
| C3' | C4' | H4' | 108.7° | 110.3° |
| C4' | C3' | O3' | 110.4° | 110.5° |
| C4' | C3' | H3' | 113.9° | 110.5° |
| C4' | C3' | C2' | 103.7° | 104.1° |
| C3' | C4' | O4' | 108.1° | 104.8° |
| H4' | C4' | O4' | 112.2° | 110.5° |
| O3' | C3' | H3' | 104.6° | 110.5° |
| C3' | O3' | HO3' | 109.5° | 114.0° |
| O3' | C3' | C2' | 113.2° | 110.5° |
| H3' | C3' | C2' | 111.2° | 110.6° |
| C3' | C2' | O2' | 110.2° | 110.5° |
| C3' | C2' | H2' | 114.8° | 110.5° |
| C3' | C2' | C1' | 102.3° | 104.1° |
| O2' | C2' | H2' | 104.8° | 110.5° |
| C2' | O2' | HO2' | 109.5° | 114.0° |
| O2' | C2' | C1' | 112.6° | 110.5° |
| H2' | C2' | C1' | 112.4° | 110.6° |
| C4' | O4' | C1' | 107.9° | 105.3° |
| O4' | C1' | C2' | 108.6° | 104.8° |
| O4' | C1' | H1' | 113.5° | 110.3° |
| O4' | C1' | N1 | 109.5° | 110.4° |
| C2' | C1' | H1' | 104.1° | 110.4° |
| C2' | C1' | N1 | 117.9° | 110.4° |
| H1' | C1' | N1 | 103.2° | 110.4° |
| C1' | N1 | C6 | 119.8° | 119.8° |
| C1' | N1 | C2 | 120.3° | 119.7° |
| N1 | C6 | C5 | 116.7° | 119.4° |
| C6 | N1 | C2 | 119.8° | 120.5° |
| N1 | C6 | C7 | 108.9° | 120.3° |
| C6 | C5 | H5 | 120.0° | 120.5° |
| C6 | C5 | C4 | 120.0° | 119.0° |
| C5 | C6 | C7 | 111.4° | 120.3° |
| H5 | C5 | C4 | 120.0° | 120.5° |
| C5 | C4 | N3 | 117.5° | 119.4° |
| C5 | C4 | O4 | 118.6° | 120.3° |
| N3 | C4 | O4 | 122.3° | 120.3° |
| C4 | N3 | C2 | 121.5° | 120.6° |
| C4 | N3 | HN3 | 119.3° | 119.7° |
| C2 | N3 | HN3 | 119.2° | 119.7° |
| N3 | C2 | N1 | 118.8° | 121.1° |
| N3 | C2 | O2 | 119.3° | 119.4° |
| N1 | C2 | O2 | 121.9° | 119.4° |
| C6 | C7 | N8 | 179.9° | 179.9° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O3P | P | O5' | O1P | 123.7° | 120.0° |
| O3P | P | O5' | O2P | 120.4° | 120.1° |
| O3P | P | O1P | O2P | 136.4° | 120.0° |
| O3P | P | O1P | HO1P | 77.9° | 180.0° |
| O3P | P | O2P | HO2P | 168.9° | 59.9° |
| O3P | P | O5' | C5' | 68.7° | 55.0° |
| O5' | P | O1P | O2P | 111.7° | 120.0° |
| O5' | P | O1P | HO1P | 170.2° | 60.0° |
| O5' | P | O2P | HO2P | 55.9° | 180.0° |
| P | O5' | C5' | C4' | 171.6° | 180.0° |
| P | O5' | C5' | H5' | 51.6° | 60.0° |
| P | O5' | C5' | H5'A | 67.4° | 60.0° |
| O1P | P | O2P | HO2P | 52.4° | 60.0° |
| O1P | P | O5' | C5' | 167.6° | 65.0° |
| HO1P | O1P | P | O2P | 58.5° | 60.0° |
| O2P | P | O5' | C5' | 51.7° | 175.0° |
| O5' | C5' | C4' | H5' | 120.0° | 120.0° |
| O5' | C5' | C4' | H5'A | 121.0° | 120.0° |
| O5' | C5' | H5' | H5'A | 121.1° | 120.0° |
| O5' | C5' | C4' | C3' | 71.7° | 175.0° |
| O5' | C5' | C4' | H4' | 48.3° | 52.8° |
| O5' | C5' | C4' | O4' | 170.3° | 69.6° |
| C4' | C5' | H5' | H5'A | 121.1° | 120.0° |
| C5' | C4' | C3' | H4' | 120.4° | 122.2° |
| C5' | C4' | C3' | O4' | 117.6° | 118.8° |
| C5' | C4' | H4' | O4' | 119.1° | 122.3° |
| C5' | C4' | C3' | O3' | 147.7° | 98.6° |
| C5' | C4' | C3' | H3' | 30.3° | 24.1° |
| C5' | C4' | C3' | C2' | 90.8° | 142.8° |
| C5' | C4' | O4' | C1' | 108.3° | 159.4° |
| H5' | C5' | C4' | C3' | 168.3° | 65.0° |
| H5' | C5' | C4' | H4' | 71.8° | 172.8° |
| H5' | C5' | C4' | O4' | 50.3° | 50.4° |
| H5'A | C5' | C4' | C3' | 49.3° | 55.0° |
| H5'A | C5' | C4' | H4' | 169.3° | 67.3° |
| H5'A | C5' | C4' | O4' | 68.7° | 170.3° |
| C3' | C4' | H4' | O4' | 119.5° | 115.4° |
| C4' | C3' | O3' | H3' | 123.0° | 122.6° |
| C4' | C3' | O3' | C2' | 115.8° | 114.7° |
| C4' | C3' | H3' | C2' | 116.8° | 114.7° |
| C4' | C3' | O3' | HO3' | 128.2° | 180.0° |
| C4' | C3' | C2' | O2' | 149.9° | 118.6° |
| C4' | C3' | C2' | H2' | 92.1° | 118.8° |
| C3' | C4' | O4' | C1' | 11.5° | 40.5° |
| C4' | C3' | C2' | C1' | 30.0° | 0.0° |
| H4' | C4' | C3' | O3' | 27.3° | 23.7° |
| H4' | C4' | C3' | H3' | 90.1° | 146.3° |
| H4' | C4' | C3' | C2' | 148.9° | 94.9° |
| H4' | C4' | O4' | C1' | 131.4° | 78.3° |
| O3' | C3' | H3' | C2' | 122.5° | 122.7° |
| O3' | C3' | C2' | O2' | 30.3° | 0.0° |
| O3' | C3' | C2' | H2' | 148.3° | 122.6° |
| O3' | C3' | C4' | O4' | 94.8° | 142.6° |
| O3' | C3' | C2' | C1' | 89.7° | 118.6° |
| H3' | C3' | O3' | HO3' | 5.2° | 57.4° |
| H3' | C3' | C2' | O2' | 87.2° | 122.7° |
| H3' | C3' | C2' | H2' | 30.8° | 0.1° |
| H3' | C3' | C4' | O4' | 147.8° | 94.8° |
| H3' | C3' | C2' | C1' | 152.8° | 118.7° |
| HO3' | O3' | C3' | C2' | 116.0° | 65.4° |
| C3' | C2' | O2' | H2' | 124.0° | 122.6° |
| C3' | C2' | O2' | C1' | 113.5° | 114.6° |
| C3' | C2' | H2' | C1' | 116.3° | 114.7° |
| C3' | C2' | O2' | HO2' | 16.1° | 61.5° |
| C2' | C3' | C4' | O4' | 26.8° | 24.0° |
| C3' | C2' | C1' | O4' | 24.4° | 24.0° |
| C3' | C2' | C1' | H1' | 96.8° | 94.8° |
| C3' | C2' | C1' | N1 | 149.7° | 142.8° |
| O2' | C2' | H2' | C1' | 122.6° | 122.6° |
| O2' | C2' | C1' | O4' | 142.7° | 142.6° |
| O2' | C2' | C1' | H1' | 21.5° | 23.9° |
| O2' | C2' | C1' | N1 | 92.1° | 98.5° |
| H2' | C2' | O2' | HO2' | 140.1° | 61.1° |
| H2' | C2' | C1' | O4' | 99.2° | 94.7° |
| H2' | C2' | C1' | H1' | 139.6° | 146.5° |
| H2' | C2' | C1' | N1 | 26.1° | 24.1° |
| HO2' | O2' | C2' | C1' | 97.4° | 176.1° |
| C4' | O4' | C1' | C2' | 8.3° | 40.5° |
| C4' | O4' | C1' | H1' | 107.0° | 78.3° |
| C4' | O4' | C1' | N1 | 138.3° | 159.4° |
| O4' | C1' | C2' | H1' | 121.2° | 118.8° |
| O4' | C1' | C2' | N1 | 125.3° | 118.8° |
| O4' | C1' | H1' | N1 | 118.4° | 122.3° |
| O4' | C1' | N1 | C6 | 116.5° | 126.5° |
| O4' | C1' | N1 | C2 | 62.0° | 53.3° |
| C2' | C1' | H1' | N1 | 123.7° | 122.4° |
| C2' | C1' | N1 | C6 | 118.7° | 118.2° |
| C2' | C1' | N1 | C2 | 62.9° | 62.1° |
| H1' | C1' | N1 | C6 | 4.6° | 4.2° |
| H1' | C1' | N1 | C2 | 176.9° | 175.5° |
| C1' | N1 | C6 | C2 | 178.5° | 179.7° |
| C1' | N1 | C6 | C5 | 169.7° | 180.0° |
| C1' | N1 | C2 | N3 | 176.8° | 179.7° |
| C1' | N1 | C2 | O2 | 2.6° | 0.3° |
| C1' | N1 | C6 | C7 | 63.2° | 0.0° |
| N1 | C6 | C5 | C7 | 125.9° | 180.0° |
| N1 | C6 | C5 | H5 | 153.1° | 180.0° |
| N1 | C6 | C5 | C4 | 26.9° | 0.0° |
| C6 | N1 | C2 | N3 | 1.7° | 0.6° |
| C6 | N1 | C2 | O2 | 179.0° | 180.0° |
| N1 | C6 | C7 | N8 | 62.2° | 79.9° |
| C6 | C5 | H5 | C4 | 180.0° | 179.9° |
| C6 | C5 | C4 | N3 | 27.9° | 0.1° |
| C6 | C5 | C4 | O4 | 166.3° | 180.0° |
| C5 | C6 | N1 | C2 | 11.8° | 0.3° |
| C5 | C6 | C7 | N8 | 167.8° | 100.1° |
| H5 | C5 | C4 | N3 | 152.1° | 180.0° |
| H5 | C5 | C4 | O4 | 13.7° | 0.1° |
| H5 | C5 | C6 | C7 | 81.0° | 0.0° |
| C5 | C4 | N3 | O4 | 165.3° | 179.9° |
| C5 | C4 | N3 | C2 | 13.5° | 0.2° |
| C5 | C4 | N3 | HN3 | 166.5° | 180.0° |
| C4 | C5 | C6 | C7 | 99.0° | 180.0° |
| C4 | N3 | C2 | HN3 | 180.0° | 179.8° |
| C4 | N3 | C2 | N1 | 0.9° | 0.5° |
| C4 | N3 | C2 | O2 | 179.7° | 180.0° |
| O4 | C4 | N3 | C2 | 178.7° | 179.7° |
| O4 | C4 | N3 | HN3 | 1.2° | 0.1° |
| N3 | C2 | N1 | O2 | 179.3° | 179.5° |
| HN3 | N3 | C2 | N1 | 179.1° | 179.7° |
| HN3 | N3 | C2 | O2 | 0.3° | 0.2° |
| C2 | N1 | C6 | C7 | 115.3° | 179.7° |
