6CF

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C2	N1	sing	1.35Å	1.41Å
C1'	N1	sing	1.47Å	1.48Å
N1	C6	sing	1.36Å	1.37Å
O5'	P1	sing	1.61Å	1.60Å
C3A	P1	sing	1.82Å	1.80Å
P1	O2A	doub	1.48Å	1.49Å
P1	O1A	sing	1.61Å	1.49Å
O2	C2	doub	1.22Å	1.24Å
C2	N3	sing	1.33Å	1.36Å
O1B	P2	doub	1.48Å	1.48Å
P2	O2B	sing	1.61Å	1.49Å
P2	C3A	sing	1.82Å	1.78Å
P2	O3B	sing	1.61Å	1.52Å
N3	C4	doub	1.33Å	1.34Å
O3B	P3	sing	1.61Å	1.52Å
P3	O3G	doub	1.48Å	1.48Å
P3	O1G	sing	1.61Å	1.49Å
P3	O2G	sing	1.61Å	1.49Å
C4	N4	sing	1.38Å	1.33Å
C4	C5	sing	1.41Å	1.42Å
N4	HN4	sing	0.97Å	1.00Å
N4	HN4A	sing	0.97Å	1.00Å
C6	C5	doub	1.35Å	1.34Å
C5	H5	sing	1.08Å	1.08Å
C6	H6	sing	1.08Å	1.08Å
C2'	C1'	sing	1.55Å	1.53Å
C1'	O4'	sing	1.44Å	1.42Å
C1'	H1'	sing	1.09Å	1.10Å
F1A	C3A	sing	1.40Å	1.33Å
O1A	HO1A	sing	0.97Å	0.95Å
O1G	HO1G	sing	0.97Å	0.95Å
C2'	C3'	sing	1.54Å	1.52Å
C2'	H2'	sing	1.09Å	1.10Å
C2'	H2'A	sing	1.09Å	1.10Å
C3A	F2A	sing	1.40Å	1.34Å
O2B	HO2B	sing	0.97Å	0.95Å
O2G	HO2G	sing	0.97Å	0.95Å
O3'	C3'	sing	1.43Å	1.42Å
C3'	C4'	sing	1.55Å	1.52Å
C3'	H3'	sing	1.09Å	1.10Å
O3'	HO3'	sing	0.97Å	0.95Å
O4'	C4'	sing	1.44Å	1.45Å
C4'	C5'	sing	1.53Å	1.51Å
C4'	H4'	sing	1.09Å	1.10Å
C5'	O5'	sing	1.43Å	1.43Å
C5'	H5'	sing	1.09Å	1.10Å
C5'	H5'A	sing	1.09Å	1.10Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C2	N1	C1'	118.9°	119.8°
C2	N1	C6	120.0°	120.3°
N1	C2	O2	119.2°	119.5°
N1	C2	N3	119.2°	121.1°
C1'	N1	C6	121.1°	119.8°
N1	C1'	C2'	112.0°	110.3°
N1	C1'	O4'	109.3°	110.4°
N1	C1'	H1'	107.0°	110.3°
N1	C6	C5	121.2°	119.3°
N1	C6	H6	119.4°	120.3°
O5'	P1	C3A	111.0°	109.4°
O5'	P1	O2A	105.2°	109.5°
O5'	P1	O1A	102.5°	109.5°
P1	O5'	C5'	121.3°	123.0°
C3A	P1	O2A	109.6°	109.4°
C3A	P1	O1A	110.0°	109.5°
P1	C3A	P2	118.5°	109.5°
P1	C3A	F1A	108.2°	109.4°
P1	C3A	F2A	107.6°	109.5°
O2A	P1	O1A	118.2°	109.5°
P1	O1A	HO1A	109.5°	114.0°
O2	C2	N3	121.6°	119.4°
C2	N3	C4	120.0°	120.7°
O1B	P2	O2B	118.9°	109.5°
O1B	P2	C3A	109.4°	109.5°
O1B	P2	O3B	103.8°	109.4°
O2B	P2	C3A	110.8°	109.5°
O2B	P2	O3B	107.3°	109.5°
P2	O2B	HO2B	109.5°	114.0°
C3A	P2	O3B	105.5°	109.5°
P2	C3A	F1A	107.7°	109.4°
P2	C3A	F2A	106.3°	109.5°
P2	O3B	P3	124.9°	134.0°
N3	C4	N4	117.9°	120.2°
N3	C4	C5	122.0°	119.7°
O3B	P3	O3G	108.4°	109.4°
O3B	P3	O1G	107.1°	109.5°
O3B	P3	O2G	109.7°	109.4°
O3G	P3	O1G	106.2°	109.5°
O3G	P3	O2G	106.1°	109.5°
O1G	P3	O2G	119.0°	109.5°
P3	O1G	HO1G	109.5°	114.0°
P3	O2G	HO2G	109.5°	114.0°
N4	C4	C5	120.1°	120.1°
C4	N4	HN4	120.0°	119.9°
C4	N4	HN4A	120.0°	120.0°
C4	C5	C6	117.6°	118.9°
C4	C5	H5	121.2°	120.5°
HN4	N4	HN4A	120.0°	120.1°
C6	C5	H5	121.2°	120.5°
C5	C6	H6	119.4°	120.4°
C2'	C1'	O4'	106.5°	104.8°
C2'	C1'	H1'	109.7°	110.4°
C1'	C2'	C3'	101.0°	104.0°
C1'	C2'	H2'	112.4°	110.5°
C1'	C2'	H2'A	112.4°	110.5°
O4'	C1'	H1'	112.4°	110.4°
C1'	O4'	C4'	109.4°	105.3°
F1A	C3A	F2A	108.2°	109.5°
C3'	C2'	H2'	112.4°	110.6°
C3'	C2'	H2'A	112.4°	110.5°
C2'	C3'	O3'	112.6°	110.5°
C2'	C3'	C4'	101.1°	104.1°
C2'	C3'	H3'	113.0°	110.6°
H2'	C2'	H2'A	106.4°	110.6°
O3'	C3'	C4'	109.7°	110.5°
O3'	C3'	H3'	104.9°	110.6°
C3'	O3'	HO3'	109.5°	114.0°
C4'	C3'	H3'	115.7°	110.5°
C3'	C4'	O4'	103.6°	104.8°
C3'	C4'	C5'	115.0°	110.3°
C3'	C4'	H4'	110.7°	110.4°
O4'	C4'	C5'	112.0°	110.4°
O4'	C4'	H4'	113.8°	110.5°
C5'	C4'	H4'	102.0°	110.3°
C4'	C5'	O5'	111.3°	109.5°
C4'	C5'	H5'	108.9°	109.5°
C4'	C5'	H5'A	108.8°	109.5°
O5'	C5'	H5'	108.8°	109.5°
O5'	C5'	H5'A	108.9°	109.4°
H5'	C5'	H5'A	110.1°	109.4°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C2	N1	C1'	C6	178.7°	179.7°
N1	C2	O2	N3	179.7°	180.0°
N1	C2	N3	C4	0.3°	0.0°
C2	N1	C6	C5	1.8°	0.0°
C2	N1	C6	H6	178.2°	180.0°
C2	N1	C1'	C2'	87.8°	61.5°
C2	N1	C1'	O4'	154.4°	53.8°
C2	N1	C1'	H1'	32.4°	176.1°
C1'	N1	C2	O2	3.4°	0.3°
C1'	N1	C2	N3	176.9°	179.7°
C1'	N1	C6	C5	176.9°	179.7°
C1'	N1	C6	H6	3.1°	0.2°
N1	C1'	C2'	O4'	119.4°	118.8°
N1	C1'	C2'	H1'	118.6°	122.3°
N1	C1'	O4'	H1'	118.6°	122.3°
N1	C1'	C2'	C3'	92.5°	142.8°
N1	C1'	C2'	H2'	147.5°	98.5°
N1	C1'	C2'	H2'A	27.5°	24.2°
N1	C1'	O4'	C4'	119.2°	159.4°
C6	N1	C2	O2	178.0°	180.0°
C6	N1	C2	N3	1.7°	0.0°
N1	C6	C5	C4	0.4°	0.0°
N1	C6	C5	H6	180.0°	179.9°
N1	C6	C5	H5	179.6°	180.0°
C6	N1	C1'	C2'	90.9°	118.2°
C6	N1	C1'	O4'	27.0°	126.5°
C6	N1	C1'	H1'	148.9°	4.2°
O5'	P1	C3A	O2A	115.8°	119.9°
O5'	P1	C3A	O1A	112.7°	120.0°
O5'	P1	O2A	O1A	113.6°	120.0°
O5'	P1	C3A	P2	74.3°	180.0°
O5'	P1	C3A	F1A	48.5°	60.0°
O5'	P1	O1A	HO1A	115.1°	60.0°
O5'	P1	C3A	F2A	165.2°	60.0°
P1	O5'	C5'	C4'	141.0°	180.0°
P1	O5'	C5'	H5'	99.0°	60.0°
P1	O5'	C5'	H5'A	21.1°	60.0°
C3A	P1	O2A	O1A	127.0°	120.0°
P1	C3A	P2	O1B	122.4°	60.0°
P1	C3A	P2	O2B	10.6°	60.0°
P1	C3A	P2	F1A	123.1°	119.9°
P1	C3A	P2	F2A	121.1°	120.1°
P1	C3A	P2	O3B	126.4°	180.0°
P1	C3A	F1A	F2A	116.3°	120.1°
C3A	P1	O1A	HO1A	126.9°	60.0°
C3A	P1	O5'	C5'	64.1°	174.9°
O2A	P1	C3A	P2	169.9°	60.1°
O2A	P1	C3A	F1A	67.3°	180.0°
O2A	P1	O1A	HO1A	0.0°	180.0°
O2A	P1	C3A	F2A	49.4°	59.9°
O2A	P1	O5'	C5'	177.4°	55.0°
O1A	P1	C3A	P2	38.4°	59.9°
O1A	P1	C3A	F1A	161.2°	60.0°
O1A	P1	C3A	F2A	82.1°	180.0°
O1A	P1	O5'	C5'	53.2°	65.0°
O2	C2	N3	C4	179.4°	180.0°
C2	N3	C4	N4	178.7°	180.0°
C2	N3	C4	C5	1.0°	0.0°
O1B	P2	O2B	C3A	128.0°	120.0°
O1B	P2	O2B	O3B	117.2°	119.9°
O1B	P2	C3A	O3B	111.1°	120.0°
O1B	P2	O3B	P3	170.8°	60.0°
O1B	P2	C3A	F1A	0.6°	60.0°
O1B	P2	C3A	F2A	116.4°	180.0°
O1B	P2	O2B	HO2B	0.0°	179.9°
O2B	P2	C3A	O3B	115.9°	120.0°
O2B	P2	O3B	P3	44.1°	60.0°
O2B	P2	C3A	F1A	133.6°	180.0°
O2B	P2	C3A	F2A	110.5°	60.0°
C3A	P2	O3B	P3	74.2°	180.0°
P2	C3A	F1A	F2A	114.6°	120.0°
C3A	P2	O2B	HO2B	128.0°	60.1°
P2	O3B	P3	O3G	108.5°	45.0°
P2	O3B	P3	O1G	5.6°	165.0°
P2	O3B	P3	O2G	136.0°	75.0°
O3B	P2	C3A	F1A	110.5°	60.0°
O3B	P2	C3A	F2A	5.3°	60.0°
O3B	P2	O2B	HO2B	117.3°	60.0°
N3	C4	N4	C5	179.7°	180.0°
N3	C4	N4	HN4	0.0°	0.0°
N3	C4	N4	HN4A	180.0°	180.0°
N3	C4	C5	C6	1.0°	0.0°
N3	C4	C5	H5	179.0°	179.9°
O3B	P3	O3G	O1G	114.7°	120.0°
O3B	P3	O3G	O2G	117.7°	119.9°
O3B	P3	O1G	O2G	125.0°	120.0°
O3B	P3	O1G	HO1G	115.6°	180.0°
O3B	P3	O2G	HO2G	116.9°	60.1°
O3G	P3	O1G	O2G	119.4°	120.0°
O3G	P3	O1G	HO1G	0.0°	60.0°
O3G	P3	O2G	HO2G	0.0°	180.0°
O1G	P3	O2G	HO2G	119.4°	60.0°
O2G	P3	O1G	HO1G	119.4°	60.0°
C4	N4	HN4	HN4A	180.0°	180.0°
N4	C4	C5	C6	178.7°	180.0°
N4	C4	C5	H5	1.3°	0.1°
C5	C4	N4	HN4	179.7°	180.0°
C5	C4	N4	HN4A	0.3°	0.0°
C4	C5	C6	H5	180.0°	180.0°
C4	C5	C6	H6	179.6°	180.0°
H5	C5	C6	H6	0.4°	0.1°
C2'	C1'	O4'	H1'	120.2°	118.9°
C1'	C2'	C3'	H2'	120.0°	118.6°
C1'	C2'	C3'	H2'A	120.0°	118.6°
C1'	C2'	H2'	H2'A	123.5°	122.7°
C1'	C2'	C3'	O3'	157.3°	118.6°
C1'	C2'	C3'	C4'	40.3°	0.0°
C1'	C2'	C3'	H3'	84.0°	118.6°
C2'	C1'	O4'	C4'	2.0°	40.6°
O4'	C1'	C2'	C3'	26.9°	24.0°
O4'	C1'	C2'	H2'	93.0°	142.7°
O4'	C1'	C2'	H2'A	146.9°	94.6°
C1'	O4'	C4'	C3'	24.1°	40.6°
C1'	O4'	C4'	C5'	148.7°	159.4°
C1'	O4'	C4'	H4'	96.2°	78.3°
H1'	C1'	C2'	C3'	148.9°	94.9°
H1'	C1'	C2'	H2'	28.9°	23.7°
H1'	C1'	C2'	H2'A	91.2°	146.4°
H1'	C1'	O4'	C4'	122.2°	78.4°
C3'	C2'	H2'	H2'A	123.4°	122.7°
C2'	C3'	O3'	C4'	111.8°	114.6°
C2'	C3'	O3'	H3'	123.3°	122.7°
C2'	C3'	C4'	H3'	122.4°	118.7°
C2'	C3'	O3'	HO3'	147.6°	61.5°
C2'	C3'	C4'	O4'	40.2°	24.0°
C2'	C3'	C4'	C5'	162.9°	142.8°
C2'	C3'	C4'	H4'	82.2°	95.0°
H2'	C2'	C3'	O3'	37.4°	0.0°
H2'	C2'	C3'	C4'	79.7°	118.6°
H2'	C2'	C3'	H3'	156.0°	122.7°
H2'A	C2'	C3'	O3'	82.7°	122.7°
H2'A	C2'	C3'	C4'	160.3°	118.7°
H2'A	C2'	C3'	H3'	36.0°	0.0°
O3'	C3'	C4'	H3'	118.4°	122.7°
O3'	C3'	C4'	O4'	159.3°	142.6°
O3'	C3'	C4'	C5'	78.0°	98.6°
O3'	C3'	C4'	H4'	37.0°	23.6°
C4'	C3'	O3'	HO3'	100.6°	176.1°
C3'	C4'	O4'	C5'	124.6°	118.8°
C3'	C4'	O4'	H4'	120.3°	118.9°
C3'	C4'	C5'	H4'	119.9°	122.3°
C3'	C4'	C5'	O5'	76.4°	175.0°
C3'	C4'	C5'	H5'	163.6°	55.0°
C3'	C4'	C5'	H5'A	43.6°	65.0°
H3'	C3'	O3'	HO3'	24.3°	61.2°
H3'	C3'	C4'	O4'	82.2°	94.7°
H3'	C3'	C4'	C5'	40.4°	24.1°
H3'	C3'	C4'	H4'	155.4°	146.3°
O4'	C4'	C5'	H4'	122.1°	122.4°
O4'	C4'	C5'	O5'	41.6°	69.6°
O4'	C4'	C5'	H5'	78.4°	170.4°
O4'	C4'	C5'	H5'A	161.6°	50.3°
C4'	C5'	O5'	H5'	120.0°	120.1°
C4'	C5'	O5'	H5'A	120.0°	120.0°
C4'	C5'	H5'	H5'A	119.2°	120.0°
H4'	C4'	C5'	O5'	163.7°	52.8°
H4'	C4'	C5'	H5'	43.7°	67.2°
H4'	C4'	C5'	H5'A	76.3°	172.7°
O5'	C5'	H5'	H5'A	119.3°	119.9°

Definition date:	2011-04-19
Last modified:	2012-01-13
Release status:	REL
Processing site:	RCSB
Derived from:	3RJH