Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
SummaryGeometryRelated PDB entries

669

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
O01C02sing1.34Å1.36Å
O01H01sing0.97Å0.95Å
C02O03doub1.21Å1.25Å
C02C04sing1.51Å1.52Å
C04C05sing1.53Å1.55Å
C04H041sing1.09Å1.11Å
C04H042sing1.09Å1.11Å
C05C06sing1.53Å1.53Å
C05H051sing1.09Å1.12Å
C05H052sing1.09Å1.11Å
C06C07sing1.53Å1.51Å
C06H061sing1.09Å1.12Å
C06H062sing1.09Å1.11Å
C07C08sing1.53Å1.54Å
C07H071sing1.09Å1.12Å
C07H072sing1.09Å1.12Å
C08N09sing1.46Å1.49Å
C08H081sing1.09Å1.11Å
C08H082sing1.09Å1.11Å
N09C10sing1.38Å1.44ÅAromatic
N09C27sing1.38Å1.39ÅAromatic
C10C11doub1.36Å1.41ÅAromatic
C10C28sing1.47Å1.46Å
C11C12sing1.42Å1.38ÅAromatic
C11H11sing1.08Å1.10Å
C12C13sing1.40Å1.42ÅAromatic
C12C27doub1.41Å1.40ÅAromatic
C13C14doub1.38Å1.43ÅAromatic
C13H13sing1.08Å1.10Å
C14O15sing1.36Å1.36Å
C14C25sing1.39Å1.41ÅAromatic
O15C16sing1.43Å1.44Å
C16C17sing1.51Å1.51Å
C16H161sing1.09Å1.12Å
C16H162sing1.09Å1.12Å
C17C18sing1.38Å1.45ÅAromatic
C17C23doub1.38Å1.45ÅAromatic
C18CL9sing1.74Å1.74Å
C18C20doub1.38Å1.42ÅAromatic
C20C21sing1.38Å1.42ÅAromatic
C20H20sing1.08Å1.10Å
C21C22doub1.38Å1.42ÅAromatic
C21H21sing1.08Å1.10Å
C22C23sing1.38Å1.42ÅAromatic
C22H22sing1.08Å1.10Å
C23CL4sing1.74Å1.74Å
C25C26doub1.38Å1.40ÅAromatic
C25H25sing1.08Å1.10Å
C26C27sing1.39Å1.44ÅAromatic
C26H26sing1.08Å1.10Å
C28O29sing1.35Å1.22Å
C28O30doub1.22Å1.35Å
O29H29sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C02O01H01121.7°120.1°
O01C02O03121.7°120.0°
O01C02C04110.4°120.0°
O03C02C04127.9°120.0°
C02C04C05113.3°109.5°
C02C04H041110.8°109.5°
C02C04H042110.8°109.5°
C05C04H041110.8°109.5°
C05C04H042110.8°109.4°
C04C05C06112.3°109.5°
C04C05H051111.2°109.4°
C04C05H052111.1°109.5°
H041C04H04299.5°109.5°
C06C05H051111.1°109.5°
C06C05H052111.2°109.5°
C05C06C07113.3°109.5°
C05C06H061110.8°109.4°
C05C06H062110.8°109.5°
H051C05H05299.2°109.5°
C07C06H061110.8°109.5°
C07C06H062110.8°109.5°
C06C07C08113.0°109.5°
C06C07H071110.9°109.4°
C06C07H072110.9°109.4°
H061C06H06299.6°109.4°
C08C07H071110.9°109.5°
C08C07H072110.9°109.5°
C07C08N09113.3°109.5°
C07C08H081110.8°109.5°
C07C08H082110.8°109.5°
H071C07H07299.4°109.6°
N09C08H081110.8°109.5°
N09C08H082110.8°109.5°
C08N09C10126.0°125.6°
C08N09C27124.1°125.6°
H081C08H08299.5°109.4°
C10N09C27109.9°108.7°
N09C10C11106.8°109.1°
N09C10C28125.6°125.4°
N09C27C12104.4°107.4°
N09C27C26134.4°133.0°
C11C10C28127.6°125.4°
C10C11C12106.0°107.8°
C10C11H11127.9°126.1°
C10C28O29126.9°120.0°
C10C28O30112.7°120.0°
C12C11H11126.0°126.1°
C11C12C13127.8°133.3°
C11C12C27112.9°107.0°
C13C12C27119.3°119.7°
C12C13C14118.5°119.7°
C12C13H13120.5°120.2°
C12C27C26121.2°119.6°
C14C13H13121.0°120.2°
C13C14O15120.4°119.8°
C13C14C25122.7°120.4°
O15C14C25116.9°119.8°
C14O15C16120.2°106.8°
C14C25C26118.4°120.6°
C14C25H25121.1°119.8°
O15C16C17105.3°109.4°
O15C16H161113.8°109.5°
O15C16H162113.8°109.5°
C17C16H161113.8°109.5°
C17C16H162113.8°109.4°
C16C17C18120.1°120.0°
C16C17C23120.5°120.0°
H161C16H16296.7°109.5°
C18C17C23119.4°120.0°
C17C18CL9123.8°120.0°
C17C18C20119.5°120.0°
C17C23C22119.5°120.0°
C17C23CL4124.0°120.0°
CL9C18C20116.7°120.0°
C18C20C21120.8°120.0°
C18C20H20119.6°120.0°
C21C20H20119.6°120.0°
C20C21C22120.3°120.1°
C20C21H21119.8°120.0°
C22C21H21119.9°119.9°
C21C22C23120.6°120.0°
C21C22H22119.7°120.0°
C23C22H22119.7°120.0°
C22C23CL4116.5°120.0°
C26C25H25120.5°119.7°
C25C26C27120.0°120.0°
C25C26H26118.5°120.0°
C27C26H26121.5°120.0°
O29C28O30120.4°120.0°
C28O29H29126.9°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
O01C02O03C04179.4°180.0°
O01C02C04C0554.3°180.0°
O01C02C04H041179.5°60.0°
O01C02C04H04271.0°60.0°
H01O01C02O03180.0°0.0°
H01O01C02C040.5°180.0°
O03C02C04C05125.2°0.0°
O03C02C04H0410.1°120.0°
O03C02C04H042109.5°120.0°
C02C04C05H041125.3°120.0°
C02C04C05H042125.3°120.0°
C02C04H041H042116.7°120.0°
C02C04C05C0645.5°180.0°
C02C04C05H051170.8°60.0°
C02C04C05H05279.8°60.0°
C05C04H041H042116.7°120.0°
C04C05C06H051125.3°120.0°
C04C05C06H052125.3°120.1°
C04C05H051H052117.0°120.0°
C04C05C06C07165.3°180.0°
C04C05C06H06169.4°60.0°
C04C05C06H06240.1°59.9°
H041C04C05C0679.7°60.0°
H041C04C05H05145.5°180.0°
H041C04C05H052155.0°60.0°
H042C04C05C06170.8°60.0°
H042C04C05H05163.9°60.0°
H042C04C05H05245.5°180.0°
C06C05H051H052117.0°120.0°
C05C06C07H061125.2°120.0°
C05C06C07H062125.3°120.1°
C05C06H061H062116.7°120.0°
C05C06C07C0872.4°180.0°
C05C06C07H071162.3°60.1°
C05C06C07H07252.8°60.0°
H051C05C06C0740.0°60.0°
H051C05C06H061165.3°180.0°
H051C05C06H06285.2°60.0°
H052C05C06C0769.4°59.9°
H052C05C06H06155.8°60.0°
H052C05C06H062165.3°NaN°
C07C06H061H062116.7°120.0°
C06C07C08H071125.3°120.0°
C06C07C08H072125.2°119.9°
C06C07H071H072116.8°120.0°
C06C07C08N0984.8°180.0°
C06C07C08H08140.5°60.0°
C06C07C08H082150.0°60.0°
H061C06C07C0852.8°60.0°
H061C06C07H07172.5°180.0°
H061C06C07H072178.1°60.0°
H062C06C07C08162.3°60.0°
H062C06C07H07137.1°60.0°
H062C06C07H07272.4°180.0°
C08C07H071H072116.8°120.1°
C07C08N09H081125.3°120.0°
C07C08N09H082125.3°120.0°
C07C08H081H082116.7°120.0°
C07C08N09C10126.6°90.0°
C07C08N09C2751.7°90.2°
H071C07C08N09150.0°60.1°
H071C07C08H08184.8°180.0°
H071C07C08H08224.7°60.0°
H072C07C08N0940.5°60.0°
H072C07C08H081165.7°59.9°
H072C07C08H08284.8°179.9°
N09C08H081H082116.7°120.0°
C08N09C10C27178.5°179.8°
C08N09C10C11176.8°179.9°
C08N09C10C286.0°0.0°
C08N09C27C12177.3°179.8°
C08N09C27C264.3°0.7°
H081C08N09C101.3°30.0°
H081C08N09C27176.9°149.7°
H082C08N09C10108.1°150.0°
H082C08N09C2773.6°29.8°
N09C10C11C28177.2°180.0°
N09C10C11C121.4°0.0°
N09C10C11H11178.5°180.0°
C10N09C27C121.2°0.4°
C10N09C27C26177.2°179.5°
N09C10C28O2933.0°0.0°
N09C10C28O30147.6°180.0°
C27N09C10C111.7°0.2°
C27N09C10C28175.6°179.8°
N09C27C12C110.3°0.3°
N09C27C12C13179.3°179.8°
N09C27C12C26178.7°179.3°
N09C27C26C25178.3°179.6°
N09C27C26H261.7°0.7°
C10C11C12H11180.0°180.0°
C10C11C12C13178.2°180.0°
C10C11C12C270.7°0.2°
C11C10C28O29143.7°179.9°
C11C10C28O3035.8°0.0°
C28C10C11C12175.7°180.0°
C28C10C11H114.3°0.0°
C10C28O29O30179.5°180.0°
C10C28O29H29180.0°180.0°
C11C12C13C27178.9°179.8°
C11C12C13C14178.3°180.0°
C11C12C13H131.7°0.1°
C11C12C27C26178.4°179.6°
H11C11C12C131.8°0.1°
H11C11C12C27179.2°179.8°
C12C13C14H13180.0°180.0°
C12C13C14O15179.2°180.0°
C12C13C14C250.1°0.0°
C13C12C27C260.7°0.5°
C27C12C13C140.6°0.2°
C27C12C13H13179.4°179.7°
C12C27C26C250.1°0.6°
C12C27C26H26179.9°179.8°
C13C14O15C25179.2°180.0°
C13C14O15C1616.4°180.0°
C13C14C25C260.6°0.1°
C13C14C25H25179.4°180.0°
H13C13C14O150.8°0.0°
H13C13C14C25179.9°180.0°
C14O15C16C17165.5°180.0°
C14O15C16H16169.3°60.0°
C14O15C16H16240.2°60.0°
O15C14C25C26179.8°180.0°
O15C14C25H250.2°0.0°
C25C14O15C16164.4°0.0°
C14C25C26H25180.0°179.9°
C14C25C26C270.5°0.4°
C14C25C26H26179.5°180.0°
O15C16C17H161125.3°120.0°
O15C16C17H162125.3°120.0°
O15C16H161H162119.7°120.0°
O15C16C17C1889.3°90.3°
O15C16C17C2388.5°90.0°
C17C16H161H162119.7°120.0°
C16C17C18C23177.8°179.7°
C16C17C18CL90.6°0.3°
C16C17C18C20178.4°179.8°
C16C17C23C22178.1°179.9°
C16C17C23CL41.9°0.0°
H161C16C17C1836.0°149.7°
H161C16C17C23146.3°30.0°
H162C16C17C18145.4°29.7°
H162C16C17C2336.8°150.0°
C17C18CL9C20177.8°179.5°
C17C18C20C210.6°0.5°
C17C18C20H20179.4°179.7°
C18C17C23C220.3°0.2°
C18C17C23CL4179.7°179.7°
C23C17C18CL9177.1°180.0°
C23C17C18C200.6°0.5°
C17C23C22C210.1°0.0°
C17C23C22CL4180.0°179.9°
C17C23C22H22179.9°180.0°
CL9C18C20C21177.3°180.0°
CL9C18C20H202.7°0.2°
C18C20C21H20180.0°179.8°
C18C20C21C220.3°0.3°
C18C20C21H21179.7°179.7°
C20C21C22H21180.0°180.0°
C20C21C22C230.1°0.0°
C20C21C22H22179.9°180.0°
H20C20C21C22179.7°180.0°
H20C20C21H210.3°0.1°
C21C22C23H22180.0°179.9°
C21C22C23CL4179.9°180.0°
H21C21C22C23180.0°180.0°
H21C21C22H220.0°0.1°
H22C22C23CL40.1°0.1°
C25C26C27H26180.0°179.6°
H25C25C26C27179.5°179.7°
H25C25C26H260.5°0.1°
O30C28O29H290.6°0.0°

246704

PDB entries from 2025-12-24

PDB statisticsPDBj update infoContact PDBjnumon