656
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C1 | C2 | doub | 1.40Å | 1.41Å | Aromatic |
C1 | C6 | sing | 1.39Å | 1.41Å | Aromatic |
C1 | C7 | sing | 1.48Å | 1.42Å | |
C2 | C3 | sing | 1.36Å | 1.40Å | Aromatic |
C2 | HC2 | sing | 1.08Å | 1.08Å | |
C3 | C4 | doub | 1.39Å | 1.36Å | Aromatic |
C3 | HC3 | sing | 1.08Å | 1.08Å | |
C4 | C5 | sing | 1.41Å | 1.34Å | Aromatic |
C4 | N3 | sing | 1.38Å | 1.28Å | Aromatic |
C5 | C6 | doub | 1.40Å | 1.40Å | Aromatic |
C5 | N4 | sing | 1.36Å | 1.32Å | Aromatic |
C6 | HC6 | sing | 1.08Å | 1.08Å | |
C7 | N1 | sing | 1.33Å | 1.32Å | |
C7 | N2 | doub | 1.33Å | 1.32Å | |
N1 | HH11 | sing | 0.97Å | 1.01Å | |
N1 | HH12 | sing | 0.97Å | 0.99Å | |
N2 | HH21 | sing | 0.97Å | 1.01Å | |
N2 | HH22 | sing | 0.97Å | 1.00Å | |
N3 | C8 | sing | 1.37Å | 1.29Å | Aromatic |
N3 | HN3 | sing | 0.97Å | 0.99Å | |
N4 | C8 | doub | 1.31Å | 1.32Å | Aromatic |
C8 | C1' | sing | 1.48Å | 1.40Å | Aromatic |
C1' | C2' | doub | 1.40Å | 1.39Å | Aromatic |
C1' | C6' | sing | 1.40Å | 1.40Å | Aromatic |
C2' | C3' | sing | 1.38Å | 1.39Å | Aromatic |
C2' | HC2' | sing | 1.08Å | 1.08Å | |
C3' | C4' | doub | 1.38Å | 1.38Å | Aromatic |
C3' | HC3' | sing | 1.08Å | 1.08Å | |
C4' | C5' | sing | 1.39Å | 1.39Å | Aromatic |
C4' | HC4' | sing | 1.08Å | 1.08Å | |
C5' | C6' | doub | 1.39Å | 1.38Å | Aromatic |
C5' | O5' | sing | 1.36Å | 1.38Å | |
C6' | O6' | sing | 1.36Å | 1.39Å | |
O5' | C10 | sing | 1.43Å | 1.41Å | |
C10 | C20 | sing | 1.53Å | 1.55Å | |
C10 | H10A | sing | 1.09Å | 1.08Å | |
C10 | H10B | sing | 1.09Å | 1.08Å | |
C20 | C30 | sing | 1.53Å | 1.51Å | |
C20 | C40 | sing | 1.53Å | 1.55Å | |
C20 | H20 | sing | 1.09Å | 1.08Å | |
C30 | H30A | sing | 1.09Å | 1.08Å | |
C30 | H30B | sing | 1.09Å | 1.08Å | |
C30 | H30C | sing | 1.09Å | 1.08Å | |
C40 | H40A | sing | 1.09Å | 1.08Å | |
C40 | H40B | sing | 1.09Å | 1.08Å | |
C40 | H40C | sing | 1.09Å | 1.08Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C2 | C1 | C6 | 118.0° | 120.2° |
C2 | C1 | C7 | 119.8° | 119.9° |
C1 | C2 | C3 | 121.4° | 120.5° |
C1 | C2 | HC2 | 121.0° | 119.7° |
C6 | C1 | C7 | 122.2° | 119.9° |
C1 | C6 | C5 | 118.9° | 119.5° |
C1 | C6 | HC6 | 121.0° | 120.2° |
C1 | C7 | N1 | 121.0° | 120.0° |
C1 | C7 | N2 | 118.4° | 120.0° |
C3 | C2 | HC2 | 117.6° | 119.8° |
C2 | C3 | C4 | 117.7° | 120.2° |
C2 | C3 | HC3 | 121.7° | 119.9° |
C4 | C3 | HC3 | 120.6° | 119.9° |
C3 | C4 | C5 | 123.3° | 120.1° |
C3 | C4 | N3 | 131.0° | 133.7° |
C5 | C4 | N3 | 105.7° | 106.2° |
C4 | C5 | C6 | 120.8° | 119.5° |
C4 | C5 | N4 | 112.5° | 107.2° |
C4 | N3 | C8 | 107.5° | 107.3° |
C4 | N3 | HN3 | 130.0° | 126.4° |
C6 | C5 | N4 | 126.8° | 133.3° |
C5 | C6 | HC6 | 120.1° | 120.3° |
C5 | N4 | C8 | 100.6° | 109.6° |
N1 | C7 | N2 | 120.6° | 120.0° |
C7 | N1 | HH11 | 118.7° | 120.0° |
C7 | N1 | HH12 | 125.7° | 120.0° |
C7 | N2 | HH21 | 120.2° | 120.0° |
C7 | N2 | HH22 | 123.4° | 120.0° |
HH11 | N1 | HH12 | 115.6° | 120.0° |
HH21 | N2 | HH22 | 116.4° | 120.0° |
C8 | N3 | HN3 | 122.6° | 126.3° |
N3 | C8 | N4 | 113.8° | 109.8° |
N3 | C8 | C1' | 121.6° | 125.1° |
N4 | C8 | C1' | 124.7° | 125.1° |
C8 | C1' | C2' | 120.1° | 120.2° |
C8 | C1' | C6' | 121.1° | 120.1° |
C2' | C1' | C6' | 118.9° | 119.7° |
C1' | C2' | C3' | 120.5° | 120.0° |
C1' | C2' | HC2' | 119.8° | 119.9° |
C1' | C6' | C5' | 120.3° | 119.7° |
C1' | C6' | O6' | 121.5° | 120.2° |
C3' | C2' | HC2' | 119.7° | 120.1° |
C2' | C3' | C4' | 120.0° | 120.3° |
C2' | C3' | HC3' | 120.0° | 119.8° |
C4' | C3' | HC3' | 119.9° | 119.9° |
C3' | C4' | C5' | 120.2° | 120.3° |
C3' | C4' | HC4' | 119.3° | 119.9° |
C5' | C4' | HC4' | 120.5° | 119.8° |
C4' | C5' | C6' | 120.1° | 120.0° |
C4' | C5' | O5' | 122.1° | 120.0° |
C6' | C5' | O5' | 117.8° | 120.0° |
C5' | C6' | O6' | 118.2° | 120.2° |
C5' | O5' | C10 | 126.7° | 106.8° |
O5' | C10 | C20 | 106.9° | 109.5° |
O5' | C10 | H10A | 108.0° | 109.5° |
O5' | C10 | H10B | 108.3° | 109.4° |
C20 | C10 | H10A | 112.5° | 109.5° |
C20 | C10 | H10B | 111.6° | 109.4° |
C10 | C20 | C30 | 107.4° | 109.5° |
C10 | C20 | C40 | 109.1° | 109.4° |
C10 | C20 | H20 | 112.3° | 109.4° |
H10A | C10 | H10B | 109.3° | 109.5° |
C30 | C20 | C40 | 106.3° | 109.5° |
C30 | C20 | H20 | 110.6° | 109.5° |
C20 | C30 | H30A | 110.8° | 109.5° |
C20 | C30 | H30B | 109.8° | 109.5° |
C20 | C30 | H30C | 109.2° | 109.5° |
C40 | C20 | H20 | 111.0° | 109.5° |
C20 | C40 | H40A | 110.1° | 109.5° |
C20 | C40 | H40B | 111.2° | 109.5° |
C20 | C40 | H40C | 110.5° | 109.4° |
H30A | C30 | H30B | 109.7° | 109.5° |
H30A | C30 | H30C | 108.7° | 109.5° |
H30B | C30 | H30C | 108.6° | 109.4° |
H40A | C40 | H40B | 108.9° | 109.5° |
H40A | C40 | H40C | 108.0° | 109.5° |
H40B | C40 | H40C | 108.1° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C2 | C1 | C6 | C7 | 180.0° | 180.0° |
C1 | C2 | C3 | HC2 | 179.9° | 180.0° |
C1 | C2 | C3 | C4 | 0.1° | 0.0° |
C1 | C2 | C3 | HC3 | 179.9° | 179.9° |
C2 | C1 | C6 | C5 | 0.3° | 0.0° |
C2 | C1 | C6 | HC6 | 179.9° | 179.9° |
C2 | C1 | C7 | N1 | 172.8° | 0.1° |
C2 | C1 | C7 | N2 | 7.9° | 180.0° |
C6 | C1 | C2 | C3 | 0.3° | 0.0° |
C6 | C1 | C2 | HC2 | 179.6° | 180.0° |
C1 | C6 | C5 | C4 | 0.2° | 0.1° |
C1 | C6 | C5 | HC6 | 179.8° | 180.0° |
C1 | C6 | C5 | N4 | 180.0° | 179.7° |
C6 | C1 | C7 | N1 | 7.2° | 179.9° |
C6 | C1 | C7 | N2 | 172.1° | 0.0° |
C7 | C1 | C2 | C3 | 179.7° | 180.0° |
C7 | C1 | C2 | HC2 | 0.4° | 0.0° |
C7 | C1 | C6 | C5 | 179.7° | 180.0° |
C7 | C1 | C6 | HC6 | 0.1° | 0.0° |
C1 | C7 | N1 | N2 | 179.2° | 180.0° |
C1 | C7 | N1 | HH11 | 0.5° | 0.1° |
C1 | C7 | N1 | HH12 | 178.4° | 180.0° |
C1 | C7 | N2 | HH21 | 2.3° | 180.0° |
C1 | C7 | N2 | HH22 | 176.5° | 0.0° |
C2 | C3 | C4 | HC3 | 180.0° | 179.9° |
C2 | C3 | C4 | C5 | 0.0° | 0.1° |
C2 | C3 | C4 | N3 | 179.8° | 180.0° |
HC2 | C2 | C3 | C4 | 179.8° | 180.0° |
HC2 | C2 | C3 | HC3 | 0.2° | 0.1° |
C3 | C4 | C5 | N3 | 179.9° | 179.9° |
C3 | C4 | C5 | C6 | 0.1° | 0.1° |
C3 | C4 | C5 | N4 | 179.9° | 179.7° |
C3 | C4 | N3 | C8 | 179.8° | 179.9° |
C3 | C4 | N3 | HN3 | 0.5° | 0.1° |
HC3 | C3 | C4 | C5 | 180.0° | 180.0° |
HC3 | C3 | C4 | N3 | 0.2° | 0.1° |
C4 | C5 | C6 | N4 | 179.8° | 179.8° |
C4 | C5 | C6 | HC6 | 180.0° | 179.9° |
C5 | C4 | N3 | C8 | 0.0° | 0.0° |
C5 | C4 | N3 | HN3 | 179.6° | 180.0° |
C4 | C5 | N4 | C8 | 0.0° | 0.4° |
N3 | C4 | C5 | C6 | 179.8° | 180.0° |
N3 | C4 | C5 | N4 | 0.0° | 0.2° |
C4 | N3 | C8 | HN3 | 179.7° | 180.0° |
C4 | N3 | C8 | N4 | 0.0° | 0.2° |
C4 | N3 | C8 | C1' | 179.0° | 180.0° |
C6 | C5 | N4 | C8 | 179.8° | 179.8° |
N4 | C5 | C6 | HC6 | 0.2° | 0.3° |
C5 | N4 | C8 | N3 | 0.0° | 0.4° |
C5 | N4 | C8 | C1' | 179.0° | 179.8° |
C7 | N1 | HH11 | HH12 | 179.0° | 179.9° |
N1 | C7 | N2 | HH21 | 176.9° | 0.0° |
N1 | C7 | N2 | HH22 | 4.2° | 179.9° |
N2 | C7 | N1 | HH11 | 179.7° | 180.0° |
N2 | C7 | N1 | HH12 | 0.9° | 0.1° |
C7 | N2 | HH21 | HH22 | 178.9° | 179.9° |
N3 | C8 | N4 | C1' | 179.0° | 179.8° |
N3 | C8 | C1' | C2' | 173.9° | 40.0° |
N3 | C8 | C1' | C6' | 5.4° | 139.8° |
HN3 | N3 | C8 | N4 | 179.6° | 179.8° |
HN3 | N3 | C8 | C1' | 1.3° | 0.0° |
N4 | C8 | C1' | C2' | 5.1° | 140.2° |
N4 | C8 | C1' | C6' | 175.7° | 40.0° |
C8 | C1' | C2' | C6' | 179.3° | 179.8° |
C8 | C1' | C2' | C3' | 179.3° | 180.0° |
C8 | C1' | C2' | HC2' | 0.8° | 0.0° |
C8 | C1' | C6' | C5' | 179.1° | 179.7° |
C8 | C1' | C6' | O6' | 1.6° | 0.2° |
C1' | C2' | C3' | HC2' | 179.9° | 180.0° |
C1' | C2' | C3' | C4' | 0.1° | 0.1° |
C1' | C2' | C3' | HC3' | 179.9° | 180.0° |
C2' | C1' | C6' | C5' | 0.2° | 0.5° |
C2' | C1' | C6' | O6' | 179.1° | 180.0° |
C6' | C1' | C2' | C3' | 0.0° | 0.2° |
C6' | C1' | C2' | HC2' | 179.9° | 179.8° |
C1' | C6' | C5' | C4' | 0.3° | 0.5° |
C1' | C6' | C5' | O6' | 179.3° | 179.5° |
C1' | C6' | C5' | O5' | 178.5° | 179.7° |
C2' | C3' | C4' | HC3' | 180.0° | 179.9° |
C2' | C3' | C4' | C5' | 0.0° | 0.0° |
C2' | C3' | C4' | HC4' | 180.0° | 180.0° |
HC2' | C2' | C3' | C4' | 180.0° | 180.0° |
HC2' | C2' | C3' | HC3' | 0.0° | 0.0° |
C3' | C4' | C5' | HC4' | 180.0° | 180.0° |
C3' | C4' | C5' | C6' | 0.2° | 0.3° |
C3' | C4' | C5' | O5' | 178.6° | 180.0° |
HC3' | C3' | C4' | C5' | 180.0° | 180.0° |
HC3' | C3' | C4' | HC4' | 0.1° | 0.1° |
C4' | C5' | C6' | O5' | 178.8° | 179.8° |
C4' | C5' | C6' | O6' | 179.0° | 180.0° |
C4' | C5' | O5' | C10 | 0.5° | 0.0° |
HC4' | C4' | C5' | C6' | 179.8° | 179.7° |
HC4' | C4' | C5' | O5' | 1.4° | 0.0° |
C6' | C5' | O5' | C10 | 179.3° | 179.8° |
O5' | C5' | C6' | O6' | 2.2° | 0.2° |
C5' | O5' | C10 | C20 | 170.9° | 180.0° |
C5' | O5' | C10 | H10A | 67.8° | 60.0° |
C5' | O5' | C10 | H10B | 50.5° | 60.0° |
O5' | C10 | C20 | H10A | 118.4° | 120.0° |
O5' | C10 | C20 | H10B | 118.3° | 119.9° |
O5' | C10 | H10A | H10B | 117.7° | 119.9° |
O5' | C10 | C20 | C30 | 113.1° | 65.0° |
O5' | C10 | C20 | C40 | 132.2° | 175.0° |
O5' | C10 | C20 | H20 | 8.7° | 55.0° |
C20 | C10 | H10A | H10B | 124.6° | 120.0° |
C10 | C20 | C30 | C40 | 116.6° | 120.0° |
C10 | C20 | C30 | H20 | 122.8° | 119.9° |
C10 | C20 | C40 | H20 | 124.2° | 119.9° |
C10 | C20 | C30 | H30A | 179.0° | 60.0° |
C10 | C20 | C30 | H30B | 57.7° | 180.0° |
C10 | C20 | C30 | H30C | 61.3° | 60.0° |
C10 | C20 | C40 | H40A | 75.0° | 60.1° |
C10 | C20 | C40 | H40B | 164.2° | 60.0° |
C10 | C20 | C40 | H40C | 44.2° | 180.0° |
H10A | C10 | C20 | C30 | 5.3° | 175.0° |
H10A | C10 | C20 | C40 | 109.5° | 55.0° |
H10A | C10 | C20 | H20 | 127.1° | 65.0° |
H10B | C10 | C20 | C30 | 128.7° | 54.9° |
H10B | C10 | C20 | C40 | 13.9° | 65.1° |
H10B | C10 | C20 | H20 | 109.6° | 174.9° |
C30 | C20 | C40 | H20 | 120.3° | 120.1° |
C20 | C30 | H30A | H30B | 121.4° | 120.0° |
C20 | C30 | H30A | H30C | 120.0° | 120.0° |
C20 | C30 | H30B | H30C | 119.3° | 120.0° |
C30 | C20 | C40 | H40A | 169.4° | 59.9° |
C30 | C20 | C40 | H40B | 48.7° | 180.0° |
C30 | C20 | C40 | H40C | 71.3° | 60.0° |
C40 | C20 | C30 | H30A | 64.3° | 60.0° |
C40 | C20 | C30 | H30B | 174.3° | 60.0° |
C40 | C20 | C30 | H30C | 55.4° | 180.0° |
C20 | C40 | H40A | H40B | 122.1° | 120.1° |
C20 | C40 | H40A | H40C | 120.8° | 119.9° |
C20 | C40 | H40B | H40C | 121.4° | 120.0° |
H20 | C20 | C30 | H30A | 56.2° | 179.9° |
H20 | C20 | C30 | H30B | 65.2° | 60.0° |
H20 | C20 | C30 | H30C | 175.9° | 59.9° |
H20 | C20 | C40 | H40A | 49.2° | 180.0° |
H20 | C20 | C40 | H40B | 71.6° | 59.9° |
H20 | C20 | C40 | H40C | 168.4° | 60.0° |
H30A | C30 | H30B | H30C | 118.7° | 120.0° |
H40A | C40 | H40B | H40C | 117.1° | 120.0° |