64T
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| P | OP1 | doub | 1.50Å | 1.48Å | |
| P | OP2 | sing | 1.62Å | 1.48Å | |
| P | O5' | sing | 1.62Å | 1.59Å | |
| P | OP3 | sing | 1.62Å | 71.84Å | |
| OP2 | HOP2 | sing | 0.98Å | 0.95Å | |
| O5' | C5' | sing | 1.42Å | 1.42Å | |
| C5' | C4' | sing | 1.52Å | 1.51Å | |
| C5' | H5' | sing | 1.09Å | 1.12Å | |
| C5' | H5'' | sing | 1.09Å | 1.12Å | |
| C4' | O4' | sing | 1.44Å | 1.45Å | |
| C4' | C3' | sing | 1.52Å | 1.53Å | |
| C4' | H4' | sing | 1.09Å | 1.11Å | |
| O4' | C1' | sing | 1.43Å | 1.41Å | |
| C3' | O3' | sing | 1.43Å | 1.42Å | |
| C3' | C2' | sing | 1.51Å | 1.51Å | |
| C3' | H3' | sing | 1.09Å | 1.12Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C2' | C1' | sing | 1.52Å | 1.51Å | |
| C2' | H2' | sing | 1.10Å | 1.12Å | |
| C2' | H2'' | sing | 1.09Å | 1.11Å | |
| C1' | N1 | sing | 1.43Å | 1.52Å | |
| C1' | H1' | sing | 1.10Å | 1.11Å | |
| N1 | C2 | sing | 1.40Å | 1.29Å | |
| N1 | C6 | sing | 1.46Å | 1.49Å | |
| C2 | O2 | doub | 1.23Å | 1.24Å | |
| C2 | N3 | sing | 1.40Å | 1.39Å | |
| N3 | C4 | sing | 1.39Å | 1.40Å | |
| N3 | H3 | sing | 1.02Å | 1.02Å | |
| C4 | O4 | doub | 1.23Å | 1.20Å | |
| C4 | C5 | sing | 1.52Å | 1.50Å | |
| C5 | C5M | sing | 1.53Å | 1.53Å | |
| C5 | O5 | sing | 1.43Å | 1.43Å | |
| C5 | C6 | sing | 1.52Å | 1.56Å | |
| C5M | H71 | sing | 1.09Å | 1.11Å | |
| C5M | H72 | sing | 1.09Å | 1.12Å | |
| C5M | H73 | sing | 1.09Å | 1.11Å | |
| O5 | HO5 | sing | 0.97Å | 0.95Å | |
| C6 | H61 | sing | 1.10Å | 1.11Å | |
| C6 | H62 | sing | 1.10Å | 1.12Å | |
| OP3 | HOP3 | sing | 0.98Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| OP1 | P | OP2 | 119.5° | 115.3° |
| OP1 | P | O5' | 107.6° | 115.0° |
| OP1 | P | OP3 | 114.0° | 115.0° |
| OP2 | P | O5' | 108.9° | 103.7° |
| OP2 | P | OP3 | 20.1° | 103.3° |
| P | OP2 | HOP2 | 119.6° | 118.9° |
| O5' | P | OP3 | 94.3° | 102.9° |
| P | O5' | C5' | 120.0° | 118.5° |
| P | OP3 | HOP3 | 114.0° | 118.9° |
| O5' | C5' | C4' | 110.4° | 108.9° |
| O5' | C5' | H5' | 111.8° | 109.0° |
| O5' | C5' | H5'' | 111.8° | 108.9° |
| C4' | C5' | H5' | 111.9° | 110.3° |
| C4' | C5' | H5'' | 111.9° | 110.3° |
| C5' | C4' | O4' | 106.4° | 107.9° |
| C5' | C4' | C3' | 112.9° | 112.9° |
| C5' | C4' | H4' | 108.3° | 109.5° |
| H5' | C5' | H5'' | 98.6° | 109.3° |
| O4' | C4' | C3' | 106.4° | 106.2° |
| O4' | C4' | H4' | 114.6° | 107.9° |
| C4' | O4' | C1' | 111.2° | 109.3° |
| C3' | C4' | H4' | 108.3° | 112.2° |
| C4' | C3' | O3' | 117.0° | 109.9° |
| C4' | C3' | C2' | 105.1° | 103.1° |
| C4' | C3' | H3' | 107.1° | 113.5° |
| O4' | C1' | C2' | 107.2° | 107.4° |
| O4' | C1' | N1 | 110.9° | 109.3° |
| O4' | C1' | H1' | 110.3° | 108.0° |
| O3' | C3' | C2' | 108.3° | 109.7° |
| O3' | C3' | H3' | 103.8° | 107.4° |
| C3' | O3' | HO3' | 116.9° | 107.3° |
| C2' | C3' | H3' | 115.9° | 113.2° |
| C3' | C2' | C1' | 107.2° | 102.5° |
| C3' | C2' | H2' | 113.0° | 109.7° |
| C3' | C2' | H2'' | 113.1° | 114.1° |
| C1' | C2' | H2' | 113.1° | 110.6° |
| C1' | C2' | H2'' | 113.1° | 111.7° |
| C2' | C1' | N1 | 110.0° | 112.8° |
| C2' | C1' | H1' | 111.1° | 111.5° |
| H2' | C2' | H2'' | 97.4° | 108.3° |
| N1 | C1' | H1' | 107.4° | 107.8° |
| C1' | N1 | C2 | 120.9° | 120.7° |
| C1' | N1 | C6 | 112.9° | 117.2° |
| C2 | N1 | C6 | 125.6° | 121.1° |
| N1 | C2 | O2 | 123.4° | 124.4° |
| N1 | C2 | N3 | 118.5° | 114.8° |
| N1 | C6 | C5 | 111.5° | 111.9° |
| N1 | C6 | H61 | 111.5° | 107.7° |
| N1 | C6 | H62 | 111.5° | 106.9° |
| O2 | C2 | N3 | 118.2° | 120.9° |
| C2 | N3 | C4 | 124.4° | 128.1° |
| C2 | N3 | H3 | 117.3° | 115.9° |
| C4 | N3 | H3 | 118.3° | 116.0° |
| N3 | C4 | O4 | 119.8° | 122.6° |
| N3 | C4 | C5 | 117.4° | 114.3° |
| O4 | C4 | C5 | 122.8° | 123.0° |
| C4 | C5 | C5M | 108.6° | 111.6° |
| C4 | C5 | O5 | 109.3° | 106.5° |
| C4 | C5 | C6 | 111.7° | 110.6° |
| C5M | C5 | O5 | 110.0° | 108.6° |
| C5M | C5 | C6 | 109.4° | 110.7° |
| C5 | C5M | H71 | 108.6° | 110.6° |
| C5 | C5M | H72 | 112.5° | 110.6° |
| C5 | C5M | H73 | 112.5° | 110.6° |
| O5 | C5 | C6 | 107.7° | 108.7° |
| C5 | O5 | HO5 | 109.3° | 106.7° |
| C5 | C6 | H61 | 111.4° | 110.1° |
| C5 | C6 | H62 | 111.4° | 111.3° |
| H71 | C5M | H72 | 112.5° | 108.3° |
| H71 | C5M | H73 | 112.6° | 108.3° |
| H72 | C5M | H73 | 97.9° | 108.4° |
| H61 | C6 | H62 | 98.9° | 108.9° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| OP1 | P | OP2 | O5' | 124.3° | 126.6° |
| OP1 | P | OP2 | OP3 | 79.1° | 126.3° |
| OP1 | P | O5' | OP3 | 116.9° | 125.8° |
| OP1 | P | OP2 | HOP2 | 180.0° | 48.8° |
| OP1 | P | O5' | C5' | 68.2° | 179.9° |
| OP1 | P | OP3 | HOP3 | 180.0° | 48.0° |
| OP2 | P | O5' | OP3 | 14.2° | 107.4° |
| OP2 | P | O5' | C5' | 160.8° | 53.2° |
| OP2 | P | OP3 | HOP3 | 69.3° | 78.5° |
| O5' | P | OP2 | HOP2 | 55.8° | 175.4° |
| P | O5' | C5' | C4' | 167.7° | 180.0° |
| P | O5' | C5' | H5' | 42.4° | 59.6° |
| P | O5' | C5' | H5'' | 67.0° | 59.6° |
| O5' | P | OP3 | HOP3 | 68.5° | 173.8° |
| OP3 | P | OP2 | HOP2 | 100.9° | 77.5° |
| OP3 | P | O5' | C5' | 175.0° | 54.2° |
| O5' | C5' | C4' | H5' | 125.2° | 119.6° |
| O5' | C5' | C4' | H5'' | 125.2° | 119.5° |
| O5' | C5' | H5' | H5'' | 117.7° | 119.0° |
| O5' | C5' | C4' | O4' | 76.5° | 62.4° |
| O5' | C5' | C4' | C3' | 39.7° | 179.5° |
| O5' | C5' | C4' | H4' | 159.7° | 54.7° |
| C4' | C5' | H5' | H5'' | 117.8° | 121.5° |
| C5' | C4' | O4' | C3' | 120.6° | 121.4° |
| C5' | C4' | O4' | H4' | 119.7° | 118.2° |
| C5' | C4' | C3' | H4' | 120.0° | 124.3° |
| C5' | C4' | O4' | C1' | 138.6° | 108.6° |
| C5' | C4' | C3' | O3' | 109.6° | 154.2° |
| C5' | C4' | C3' | C2' | 130.2° | 88.8° |
| C5' | C4' | C3' | H3' | 6.4° | 34.0° |
| H5' | C5' | C4' | O4' | 158.2° | 57.1° |
| H5' | C5' | C4' | C3' | 85.5° | 60.0° |
| H5' | C5' | C4' | H4' | 34.5° | 174.3° |
| H5'' | C5' | C4' | O4' | 48.7° | 178.1° |
| H5'' | C5' | C4' | C3' | 165.0° | 61.0° |
| H5'' | C5' | C4' | H4' | 75.0° | 64.8° |
| O4' | C4' | C3' | H4' | 123.7° | 117.6° |
| O4' | C4' | C3' | O3' | 134.1° | 87.7° |
| O4' | C4' | C3' | C2' | 13.9° | 29.2° |
| O4' | C4' | C3' | H3' | 109.9° | 152.1° |
| C4' | O4' | C1' | C2' | 14.4° | 9.0° |
| C4' | O4' | C1' | N1 | 134.5° | 131.7° |
| C4' | O4' | C1' | H1' | 106.7° | 111.3° |
| C3' | C4' | O4' | C1' | 18.0° | 12.7° |
| C4' | C3' | O3' | C2' | 118.5° | 112.7° |
| C4' | C3' | O3' | H3' | 117.8° | 123.9° |
| C4' | C3' | C2' | H3' | 118.1° | 123.0° |
| C4' | C3' | O3' | HO3' | 180.0° | 163.7° |
| C4' | C3' | C2' | C1' | 5.7° | 33.4° |
| C4' | C3' | C2' | H2' | 130.9° | 84.1° |
| C4' | C3' | C2' | H2'' | 119.6° | 154.3° |
| H4' | C4' | O4' | C1' | 101.7° | 133.2° |
| H4' | C4' | C3' | O3' | 10.4° | 29.9° |
| H4' | C4' | C3' | C2' | 109.8° | 146.9° |
| H4' | C4' | C3' | H3' | 126.4° | 90.3° |
| O4' | C1' | C2' | C3' | 4.9° | 26.9° |
| O4' | C1' | C2' | N1 | 120.6° | 120.5° |
| O4' | C1' | C2' | H1' | 120.6° | 118.1° |
| O4' | C1' | C2' | H2' | 120.4° | 90.0° |
| O4' | C1' | C2' | H2'' | 130.1° | 149.4° |
| O4' | C1' | N1 | H1' | 120.5° | 117.1° |
| O4' | C1' | N1 | C2 | 108.8° | 147.1° |
| O4' | C1' | N1 | C6 | 79.5° | 22.0° |
| O3' | C3' | C2' | H3' | 116.2° | 119.9° |
| O3' | C3' | C2' | C1' | 131.4° | 83.6° |
| O3' | C3' | C2' | H2' | 103.3° | 158.9° |
| O3' | C3' | C2' | H2'' | 6.1° | 37.2° |
| C2' | C3' | O3' | HO3' | 61.5° | 83.6° |
| C3' | C2' | C1' | H2' | 125.2° | 116.9° |
| C3' | C2' | C1' | H2'' | 125.3° | 122.5° |
| C3' | C2' | H2' | H2'' | 119.0° | 125.1° |
| C3' | C2' | C1' | N1 | 125.5° | 147.4° |
| C3' | C2' | C1' | H1' | 115.7° | 91.2° |
| H3' | C3' | O3' | HO3' | 62.2° | 39.9° |
| H3' | C3' | C2' | C1' | 112.4° | 156.4° |
| H3' | C3' | C2' | H2' | 12.8° | 38.9° |
| H3' | C3' | C2' | H2'' | 122.3° | 82.7° |
| C1' | C2' | H2' | H2'' | 119.0° | 122.7° |
| C2' | C1' | N1 | H1' | 121.1° | 123.5° |
| C2' | C1' | N1 | C2 | 132.8° | 93.5° |
| C2' | C1' | N1 | C6 | 38.9° | 97.4° |
| H2' | C2' | C1' | N1 | 0.3° | 30.6° |
| H2' | C2' | C1' | H1' | 119.1° | 151.9° |
| H2'' | C2' | C1' | N1 | 109.2° | 90.1° |
| H2'' | C2' | C1' | H1' | 9.6° | 31.3° |
| C1' | N1 | C2 | C6 | 170.6° | 168.6° |
| C1' | N1 | C2 | O2 | 0.3° | 2.1° |
| C1' | N1 | C2 | N3 | 179.0° | 178.3° |
| C1' | N1 | C6 | C5 | 161.5° | 151.2° |
| C1' | N1 | C6 | H61 | 36.2° | 30.1° |
| C1' | N1 | C6 | H62 | 73.3° | 86.7° |
| H1' | C1' | N1 | C2 | 11.7° | 30.0° |
| H1' | C1' | N1 | C6 | 160.0° | 139.1° |
| N1 | C2 | O2 | N3 | 179.2° | 179.6° |
| N1 | C2 | N3 | C4 | 0.3° | 9.5° |
| N1 | C2 | N3 | H3 | 179.7° | 172.8° |
| C2 | N1 | C6 | C5 | 27.3° | 39.8° |
| C2 | N1 | C6 | H61 | 152.6° | 160.9° |
| C2 | N1 | C6 | H62 | 98.0° | 82.3° |
| C6 | N1 | C2 | O2 | 170.8° | 170.7° |
| C6 | N1 | C2 | N3 | 8.4° | 9.7° |
| N1 | C6 | C5 | C4 | 36.4° | 50.2° |
| N1 | C6 | C5 | C5M | 83.9° | 174.5° |
| N1 | C6 | C5 | O5 | 156.5° | 66.3° |
| N1 | C6 | C5 | H61 | 125.3° | 119.7° |
| N1 | C6 | C5 | H62 | 125.3° | 119.5° |
| N1 | C6 | H61 | H62 | 117.4° | 115.6° |
| O2 | C2 | N3 | C4 | 179.0° | 170.1° |
| O2 | C2 | N3 | H3 | 1.0° | 7.6° |
| C2 | N3 | C4 | H3 | 180.0° | 177.7° |
| C2 | N3 | C4 | O4 | 166.2° | 178.6° |
| C2 | N3 | C4 | C5 | 13.7° | 4.4° |
| N3 | C4 | O4 | C5 | 179.9° | 176.7° |
| N3 | C4 | C5 | C5M | 89.2° | 157.6° |
| N3 | C4 | C5 | O5 | 150.8° | 84.0° |
| N3 | C4 | C5 | C6 | 31.6° | 33.9° |
| H3 | N3 | C4 | O4 | 13.8° | 3.6° |
| H3 | N3 | C4 | C5 | 166.3° | 173.4° |
| O4 | C4 | C5 | C5M | 90.9° | 25.4° |
| O4 | C4 | C5 | O5 | 29.1° | 93.0° |
| O4 | C4 | C5 | C6 | 148.3° | 149.1° |
| C4 | C5 | C5M | O5 | 119.6° | 117.0° |
| C4 | C5 | C5M | C6 | 122.2° | 123.7° |
| C4 | C5 | O5 | C6 | 121.6° | 119.2° |
| C4 | C5 | C5M | H71 | 179.9° | 161.9° |
| C4 | C5 | C5M | H72 | 54.8° | 41.9° |
| C4 | C5 | C5M | H73 | 54.7° | 78.2° |
| C4 | C5 | O5 | HO5 | 180.0° | 92.1° |
| C4 | C5 | C6 | H61 | 161.7° | 169.9° |
| C4 | C5 | C6 | H62 | 88.9° | 69.3° |
| C5M | C5 | O5 | C6 | 119.2° | 120.5° |
| C5 | C5M | H71 | H72 | 125.2° | 121.4° |
| C5 | C5M | H71 | H73 | 125.3° | 121.3° |
| C5 | C5M | H72 | H73 | 118.4° | 121.4° |
| C5M | C5 | O5 | HO5 | 60.8° | 147.6° |
| C5M | C5 | C6 | H61 | 41.3° | 65.9° |
| C5M | C5 | C6 | H62 | 150.8° | 54.9° |
| O5 | C5 | C5M | H71 | 60.4° | 44.8° |
| O5 | C5 | C5M | H72 | 64.8° | 75.2° |
| O5 | C5 | C5M | H73 | 174.3° | 164.8° |
| O5 | C5 | C6 | H61 | 78.2° | 53.4° |
| O5 | C5 | C6 | H62 | 31.2° | 174.2° |
| C6 | C5 | C5M | H71 | 57.8° | 74.5° |
| C6 | C5 | C5M | H72 | 177.0° | 165.5° |
| C6 | C5 | C5M | H73 | 67.5° | 45.5° |
| C6 | C5 | O5 | HO5 | 58.4° | 27.1° |
| C5 | C6 | H61 | H62 | 117.3° | 122.2° |
| H71 | C5M | H72 | H73 | 118.5° | 117.3° |
