61H
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O3' | C3' | sing | 1.43Å | 1.22Å | |
| C2' | C3' | sing | 1.55Å | 1.52Å | |
| C2' | C1' | sing | 1.55Å | 1.51Å | |
| C3' | C4' | sing | 1.54Å | 1.53Å | |
| C14 | C13 | doub | 1.37Å | 1.39Å | Aromatic |
| C14 | C1 | sing | 1.39Å | 1.39Å | Aromatic |
| C13 | C12 | sing | 1.40Å | 1.39Å | Aromatic |
| C10 | C9 | doub | 1.37Å | 1.40Å | Aromatic |
| C10 | C11 | sing | 1.40Å | 1.40Å | Aromatic |
| C9 | C8 | sing | 1.39Å | 1.39Å | Aromatic |
| C1' | C1 | sing | 1.51Å | 1.51Å | |
| C1' | O4' | sing | 1.44Å | 1.40Å | |
| C1 | C2 | doub | 1.36Å | 1.38Å | Aromatic |
| C12 | C11 | doub | 1.47Å | 1.39Å | Aromatic |
| C12 | C3 | sing | 1.41Å | 1.39Å | Aromatic |
| C11 | C6 | sing | 1.41Å | 1.39Å | Aromatic |
| C8 | C7 | doub | 1.36Å | 1.37Å | Aromatic |
| C2 | C3 | sing | 1.40Å | 1.38Å | Aromatic |
| C4' | O4' | sing | 1.44Å | 1.42Å | |
| C4' | C5' | sing | 1.53Å | 1.53Å | |
| C3 | C4 | doub | 1.41Å | 1.38Å | Aromatic |
| C6 | C7 | sing | 1.40Å | 1.38Å | Aromatic |
| C6 | C5 | doub | 1.41Å | 1.38Å | Aromatic |
| C4 | C5 | sing | 1.35Å | 1.38Å | Aromatic |
| C5' | O5' | sing | 1.43Å | 1.41Å | |
| O2P | P | sing | 1.61Å | 1.48Å | |
| O5' | P | sing | 1.61Å | 1.58Å | |
| P | O1P | doub | 1.48Å | 1.48Å | |
| O2P | H2 | sing | 0.97Å | 0.95Å | |
| C5' | H3 | sing | 1.09Å | 1.10Å | |
| C5' | H4 | sing | 1.09Å | 1.10Å | |
| C4' | H5 | sing | 1.09Å | 1.10Å | |
| C1' | H6 | sing | 1.09Å | 1.10Å | |
| C2 | H7 | sing | 1.08Å | 1.08Å | |
| C4 | H8 | sing | 1.08Å | 1.08Å | |
| C5 | H9 | sing | 1.08Å | 1.08Å | |
| C7 | H10 | sing | 1.08Å | 1.08Å | |
| C8 | H11 | sing | 1.08Å | 1.08Å | |
| C9 | H12 | sing | 1.08Å | 1.08Å | |
| C10 | H13 | sing | 1.08Å | 1.08Å | |
| C13 | H14 | sing | 1.08Å | 1.08Å | |
| C14 | H15 | sing | 1.08Å | 1.08Å | |
| C3' | H16 | sing | 1.09Å | 1.10Å | |
| C2' | H17 | sing | 1.09Å | 1.10Å | |
| C2' | H18 | sing | 1.09Å | 1.10Å | |
| O3' | H19 | sing | 0.97Å | 0.95Å | |
| P | O1 | sing | 1.61Å | 101.82Å | |
| O1 | H1 | sing | 0.97Å | 0.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O3' | C3' | C2' | 108.2° | 110.6° |
| O3' | C3' | C4' | 114.0° | 110.5° |
| O3' | C3' | H16 | 112.1° | 110.4° |
| C3' | O3' | H19 | 109.5° | 114.0° |
| C3' | C2' | C1' | 98.5° | 102.1° |
| C2' | C3' | C4' | 107.2° | 104.2° |
| C2' | C3' | H16 | 107.6° | 110.5° |
| C3' | C2' | H17 | 112.2° | 110.9° |
| C3' | C2' | H18 | 112.1° | 110.9° |
| C2' | C1' | C1 | 110.8° | 110.6° |
| C2' | C1' | O4' | 105.7° | 103.5° |
| C2' | C1' | H6 | 109.4° | 110.8° |
| C1' | C2' | H17 | 112.1° | 110.9° |
| C1' | C2' | H18 | 112.1° | 110.9° |
| C3' | C4' | O4' | 102.4° | 107.3° |
| C3' | C4' | C5' | 115.8° | 109.9° |
| C3' | C4' | H5 | 107.6° | 110.0° |
| C4' | C3' | H16 | 107.5° | 110.5° |
| C13 | C14 | C1 | 120.6° | 120.8° |
| C14 | C13 | C12 | 120.2° | 119.7° |
| C14 | C13 | H14 | 119.9° | 120.2° |
| C13 | C14 | H15 | 119.7° | 119.6° |
| C14 | C1 | C1' | 119.8° | 119.6° |
| C14 | C1 | C2 | 119.4° | 120.9° |
| C1 | C14 | H15 | 119.7° | 119.6° |
| C13 | C12 | C11 | 121.5° | 121.6° |
| C13 | C12 | C3 | 118.6° | 119.7° |
| C12 | C13 | H14 | 119.9° | 120.1° |
| C9 | C10 | C11 | 119.9° | 119.7° |
| C10 | C9 | C8 | 120.3° | 120.7° |
| C10 | C9 | H12 | 119.8° | 119.7° |
| C9 | C10 | H13 | 120.0° | 120.2° |
| C10 | C11 | C12 | 122.6° | 121.6° |
| C10 | C11 | C6 | 118.5° | 119.7° |
| C11 | C10 | H13 | 120.0° | 120.1° |
| C9 | C8 | C7 | 119.7° | 120.9° |
| C9 | C8 | H11 | 120.2° | 119.5° |
| C8 | C9 | H12 | 119.9° | 119.6° |
| C1 | C1' | O4' | 110.4° | 110.6° |
| C1' | C1 | C2 | 120.7° | 119.5° |
| C1 | C1' | H6 | 109.5° | 110.5° |
| C1' | O4' | C4' | 103.0° | 106.9° |
| O4' | C1' | H6 | 111.0° | 110.6° |
| C1 | C2 | C3 | 119.9° | 119.7° |
| C1 | C2 | H7 | 120.1° | 120.1° |
| C11 | C12 | C3 | 119.9° | 118.7° |
| C12 | C11 | C6 | 118.9° | 118.7° |
| C12 | C3 | C2 | 121.3° | 119.2° |
| C12 | C3 | C4 | 120.5° | 119.8° |
| C11 | C6 | C7 | 121.2° | 119.2° |
| C11 | C6 | C5 | 120.9° | 119.9° |
| C8 | C7 | C6 | 120.5° | 119.7° |
| C8 | C7 | H10 | 119.8° | 120.1° |
| C7 | C8 | H11 | 120.1° | 119.5° |
| C2 | C3 | C4 | 118.2° | 121.0° |
| C3 | C2 | H7 | 120.1° | 120.1° |
| O4' | C4' | C5' | 114.2° | 109.9° |
| O4' | C4' | H5 | 109.0° | 109.9° |
| C4' | C5' | O5' | 108.6° | 109.5° |
| C4' | C5' | H3 | 109.7° | 109.5° |
| C4' | C5' | H4 | 109.7° | 109.5° |
| C5' | C4' | H5 | 107.5° | 109.8° |
| C3 | C4 | C5 | 120.0° | 121.4° |
| C3 | C4 | H8 | 120.0° | 119.2° |
| C7 | C6 | C5 | 118.0° | 121.0° |
| C6 | C7 | H10 | 119.8° | 120.1° |
| C6 | C5 | C4 | 119.8° | 121.4° |
| C6 | C5 | H9 | 120.1° | 119.3° |
| C5 | C4 | H8 | 120.0° | 119.3° |
| C4 | C5 | H9 | 120.1° | 119.3° |
| C5' | O5' | P | 118.8° | 123.0° |
| O5' | C5' | H3 | 109.7° | 109.5° |
| O5' | C5' | H4 | 109.7° | 109.5° |
| O2P | P | O5' | 122.3° | 109.4° |
| O2P | P | O1P | 113.2° | 109.5° |
| P | O2P | H2 | 109.5° | 113.9° |
| O2P | P | O1 | 101.8° | 109.5° |
| O5' | P | O1P | 122.6° | 109.5° |
| O5' | P | O1 | 56.2° | 109.5° |
| O1P | P | O1 | 100.7° | 109.4° |
| H3 | C5' | H4 | 109.5° | 109.4° |
| H17 | C2' | H18 | 109.5° | 110.8° |
| P | O1 | H1 | 90.0° | 114.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O3' | C3' | C2' | C4' | 123.4° | 118.7° |
| O3' | C3' | C2' | H16 | 121.3° | 122.6° |
| O3' | C3' | C2' | C1' | 113.2° | 97.9° |
| O3' | C3' | C4' | H16 | 124.8° | 122.5° |
| O3' | C3' | C4' | O4' | 137.7° | 120.8° |
| O3' | C3' | C4' | C5' | 97.4° | 119.7° |
| O3' | C3' | C4' | H5 | 22.9° | 1.3° |
| O3' | C3' | C2' | H17 | 128.6° | 20.3° |
| O3' | C3' | C2' | H18 | 5.0° | 143.9° |
| C3' | C2' | C1' | H17 | 118.2° | 118.2° |
| C3' | C2' | C1' | H18 | 118.2° | 118.2° |
| C2' | C3' | C4' | H16 | 115.4° | 118.7° |
| C3' | C2' | C1' | C1 | 155.8° | 155.5° |
| C3' | C2' | C1' | O4' | 36.2° | 37.0° |
| C2' | C3' | C4' | O4' | 18.0° | 2.0° |
| C2' | C3' | C4' | C5' | 142.9° | 121.4° |
| C2' | C3' | C4' | H5 | 96.8° | 117.5° |
| C3' | C2' | C1' | H6 | 83.4° | 81.5° |
| C3' | C2' | H17 | H18 | 125.2° | 123.7° |
| C2' | C3' | O3' | H19 | 180.0° | 65.1° |
| C1' | C2' | C3' | C4' | 10.2° | 20.9° |
| C2' | C1' | C1 | C14 | 79.0° | 75.8° |
| C2' | C1' | C1 | O4' | 116.7° | 114.1° |
| C2' | C1' | C1 | H6 | 120.8° | 123.1° |
| C2' | C1' | O4' | H6 | 118.6° | 118.7° |
| C2' | C1' | C1 | C2 | 101.4° | 104.5° |
| C2' | C1' | O4' | C4' | 50.6° | 40.0° |
| C1' | C2' | C3' | H16 | 125.5° | 139.6° |
| C1' | C2' | H17 | H18 | 125.1° | 123.6° |
| C3' | C4' | O4' | C1' | 41.1° | 26.5° |
| C3' | C4' | O4' | C5' | 125.9° | 119.4° |
| C3' | C4' | O4' | H5 | 113.8° | 119.6° |
| C3' | C4' | C5' | H5 | 120.3° | 121.1° |
| C3' | C4' | C5' | O5' | 156.6° | 175.7° |
| C3' | C4' | C5' | H3 | 83.5° | 64.3° |
| C3' | C4' | C5' | H4 | 36.8° | 55.7° |
| C4' | C3' | C2' | H17 | 108.0° | 139.1° |
| C4' | C3' | C2' | H18 | 128.3° | 97.3° |
| C4' | C3' | O3' | H19 | 60.8° | 180.0° |
| C13 | C14 | C1 | H15 | 180.0° | 179.3° |
| C14 | C13 | C12 | H14 | 180.0° | 179.6° |
| C13 | C14 | C1 | C1' | 179.8° | 179.6° |
| C13 | C14 | C1 | C2 | 0.2° | 0.7° |
| C14 | C13 | C12 | C11 | 180.0° | 179.6° |
| C14 | C13 | C12 | C3 | 0.0° | 0.4° |
| C1 | C14 | C13 | C12 | 0.1° | 0.7° |
| C14 | C1 | C1' | C2 | 179.6° | 179.7° |
| C14 | C1 | C1' | O4' | 164.4° | 38.3° |
| C14 | C1 | C2 | C3 | 0.3° | 0.3° |
| C14 | C1 | C1' | H6 | 41.8° | 161.1° |
| C14 | C1 | C2 | H7 | 179.7° | 179.7° |
| C1 | C14 | C13 | H14 | 180.0° | 179.7° |
| C13 | C12 | C11 | C10 | 0.0° | 0.0° |
| C13 | C12 | C11 | C3 | 180.0° | 179.9° |
| C13 | C12 | C11 | C6 | 180.0° | 180.0° |
| C13 | C12 | C3 | C2 | 0.0° | 0.1° |
| C13 | C12 | C3 | C4 | 180.0° | 180.0° |
| C12 | C13 | C14 | H15 | 179.9° | 180.0° |
| C9 | C10 | C11 | H13 | 180.0° | 179.9° |
| C10 | C9 | C8 | H12 | 180.0° | 180.0° |
| C9 | C10 | C11 | C12 | 180.0° | 180.0° |
| C9 | C10 | C11 | C6 | 0.0° | 0.1° |
| C10 | C9 | C8 | C7 | 0.1° | 0.1° |
| C10 | C9 | C8 | H11 | 180.0° | 180.0° |
| C11 | C10 | C9 | C8 | 0.1° | 0.0° |
| C10 | C11 | C12 | C6 | 180.0° | 179.9° |
| C10 | C11 | C12 | C3 | 180.0° | 179.9° |
| C10 | C11 | C6 | C7 | 0.0° | 0.0° |
| C10 | C11 | C6 | C5 | 180.0° | 179.9° |
| C11 | C10 | C9 | H12 | 179.9° | 180.0° |
| C9 | C8 | C7 | H11 | 180.0° | 179.9° |
| C9 | C8 | C7 | C6 | 0.0° | 0.1° |
| C9 | C8 | C7 | H10 | 180.0° | 179.9° |
| C8 | C9 | C10 | H13 | 179.9° | 179.9° |
| C1 | C1' | O4' | H6 | 121.6° | 122.8° |
| C1' | C1 | C2 | C3 | 179.9° | 179.9° |
| C1 | C1' | O4' | C4' | 170.4° | 158.6° |
| C1' | C1 | C2 | H7 | 0.1° | 0.0° |
| C1' | C1 | C14 | H15 | 0.1° | 0.3° |
| C1 | C1' | C2' | H17 | 37.6° | 86.3° |
| C1 | C1' | C2' | H18 | 86.1° | 37.3° |
| O4' | C1' | C1 | C2 | 15.2° | 141.4° |
| C1' | O4' | C4' | C5' | 167.0° | 145.9° |
| C1' | O4' | C4' | H5 | 72.7° | 93.1° |
| O4' | C1' | C2' | H17 | 82.0° | 155.2° |
| O4' | C1' | C2' | H18 | 154.4° | 81.2° |
| C1 | C2 | C3 | C12 | 0.2° | 0.1° |
| C1 | C2 | C3 | H7 | 180.0° | 179.9° |
| C1 | C2 | C3 | C4 | 179.9° | 180.0° |
| C2 | C1 | C1' | H6 | 137.8° | 18.6° |
| C2 | C1 | C14 | H15 | 179.8° | 180.0° |
| C11 | C12 | C3 | C2 | 180.0° | 180.0° |
| C11 | C12 | C3 | C4 | 0.1° | 0.1° |
| C12 | C11 | C6 | C7 | 179.9° | 180.0° |
| C12 | C11 | C6 | C5 | 0.0° | 0.0° |
| C12 | C11 | C10 | H13 | 0.0° | 0.1° |
| C11 | C12 | C13 | H14 | 0.1° | 0.1° |
| C3 | C12 | C11 | C6 | 0.0° | 0.0° |
| C12 | C3 | C2 | C4 | 179.9° | 179.9° |
| C12 | C3 | C4 | C5 | 0.0° | 0.0° |
| C12 | C3 | C2 | H7 | 179.8° | 180.0° |
| C12 | C3 | C4 | H8 | 180.0° | 180.0° |
| C3 | C12 | C13 | H14 | 180.0° | 180.0° |
| C11 | C6 | C7 | C8 | 0.0° | 0.1° |
| C11 | C6 | C7 | C5 | 180.0° | 180.0° |
| C11 | C6 | C5 | C4 | 0.0° | 0.0° |
| C11 | C6 | C5 | H9 | 180.0° | 179.9° |
| C11 | C6 | C7 | H10 | 180.0° | 180.0° |
| C6 | C11 | C10 | H13 | 180.0° | 180.0° |
| C8 | C7 | C6 | H10 | 180.0° | 180.0° |
| C8 | C7 | C6 | C5 | 180.0° | 180.0° |
| C7 | C8 | C9 | H12 | 179.9° | 179.9° |
| C2 | C3 | C4 | C5 | 180.0° | 179.9° |
| C2 | C3 | C4 | H8 | 0.0° | 0.1° |
| O4' | C4' | C5' | H5 | 121.1° | 121.0° |
| O4' | C4' | C5' | O5' | 38.1° | 66.4° |
| O4' | C4' | C5' | H3 | 158.0° | 53.6° |
| O4' | C4' | C5' | H4 | 81.8° | 173.6° |
| C4' | O4' | C1' | H6 | 68.0° | 78.7° |
| O4' | C4' | C3' | H16 | 97.5° | 116.6° |
| C4' | C5' | O5' | H3 | 119.8° | 120.0° |
| C4' | C5' | O5' | H4 | 119.9° | 120.0° |
| C4' | C5' | O5' | P | 134.2° | 180.0° |
| C4' | C5' | H3 | H4 | 120.4° | 120.0° |
| C5' | C4' | C3' | H16 | 27.4° | 2.8° |
| C3 | C4 | C5 | C6 | 0.0° | 0.0° |
| C3 | C4 | C5 | H8 | 180.0° | 180.0° |
| C4 | C3 | C2 | H7 | 0.1° | 0.1° |
| C3 | C4 | C5 | H9 | 180.0° | 179.9° |
| C7 | C6 | C5 | C4 | 179.9° | 179.9° |
| C7 | C6 | C5 | H9 | 0.1° | 0.0° |
| C6 | C7 | C8 | H11 | 180.0° | 180.0° |
| C6 | C5 | C4 | H9 | 180.0° | 179.9° |
| C6 | C5 | C4 | H8 | 180.0° | 180.0° |
| C5 | C6 | C7 | H10 | 0.0° | 0.0° |
| C5' | O5' | P | O2P | 56.7° | 175.0° |
| C5' | O5' | P | O1P | 106.4° | 55.0° |
| O5' | C5' | H3 | H4 | 120.4° | 120.0° |
| O5' | C5' | C4' | H5 | 83.0° | 54.5° |
| C5' | O5' | P | O1 | 25.7° | 65.0° |
| O2P | P | O5' | O1P | 163.0° | 120.0° |
| O2P | P | O5' | O1 | 82.4° | 120.0° |
| O2P | P | O1P | O1 | 107.9° | 120.0° |
| O2P | P | O1 | H1 | 90.0° | 60.0° |
| O5' | P | O1P | O1 | 56.5° | 120.0° |
| O5' | P | O2P | H2 | 164.5° | 180.0° |
| P | O5' | C5' | H3 | 106.0° | 60.0° |
| P | O5' | C5' | H4 | 14.3° | 60.0° |
| O5' | P | O1 | H1 | 90.0° | 60.0° |
| O1P | P | O2P | H2 | 0.0° | 60.0° |
| O1P | P | O1 | H1 | 90.0° | 180.0° |
| H2 | O2P | P | O1 | 107.2° | 60.0° |
| H3 | C5' | C4' | H5 | 36.8° | 174.6° |
| H4 | C5' | C4' | H5 | 157.1° | 65.5° |
| H5 | C4' | C3' | H16 | 147.7° | 123.8° |
| H6 | C1' | C2' | H17 | 158.4° | 36.7° |
| H6 | C1' | C2' | H18 | 34.8° | 160.3° |
| H8 | C4 | C5 | H9 | 0.0° | 0.1° |
| H10 | C7 | C8 | H11 | 0.0° | 0.1° |
| H11 | C8 | C9 | H12 | 0.1° | 0.0° |
| H12 | C9 | C10 | H13 | 0.1° | 0.1° |
| H14 | C13 | C14 | H15 | 0.1° | 0.4° |
| H16 | C3' | C2' | H17 | 7.3° | 102.3° |
| H16 | C3' | C2' | H18 | 116.4° | 21.3° |
| H16 | C3' | O3' | H19 | 61.5° | 57.5° |
