5Z9
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N1 | C5 | trip | 1.14Å | 1.16Å | |
| C5 | C3 | sing | 1.47Å | 1.49Å | |
| C4 | C3 | sing | 1.53Å | 1.52Å | |
| C3 | C2 | sing | 1.53Å | 1.53Å | |
| C3 | O1 | sing | 1.43Å | 1.45Å | |
| C2 | C1 | sing | 1.53Å | 1.51Å | |
| C1 | H1 | sing | 1.09Å | 1.10Å | |
| C1 | H2 | sing | 1.09Å | 1.10Å | |
| C1 | H3 | sing | 1.09Å | 1.10Å | |
| C2 | H4 | sing | 1.09Å | 1.10Å | |
| C2 | H5 | sing | 1.09Å | 1.10Å | |
| C4 | H6 | sing | 1.09Å | 1.10Å | |
| C4 | H7 | sing | 1.09Å | 1.10Å | |
| C4 | H8 | sing | 1.09Å | 1.10Å | |
| O1 | H9 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| N1 | C5 | C3 | 177.2° | 179.9° |
| C5 | C3 | C4 | 109.9° | 109.5° |
| C5 | C3 | C2 | 109.9° | 109.5° |
| C5 | C3 | O1 | 112.1° | 109.5° |
| C4 | C3 | C2 | 108.6° | 109.4° |
| C4 | C3 | O1 | 113.0° | 109.5° |
| C3 | C4 | H6 | 109.5° | 109.5° |
| C3 | C4 | H7 | 109.5° | 109.4° |
| C3 | C4 | H8 | 109.4° | 109.5° |
| C2 | C3 | O1 | 103.1° | 109.4° |
| C3 | C2 | C1 | 113.4° | 109.5° |
| C3 | C2 | H4 | 108.5° | 109.4° |
| C3 | C2 | H5 | 108.5° | 109.5° |
| C3 | O1 | H9 | 109.5° | 114.0° |
| C2 | C1 | H1 | 109.5° | 109.4° |
| C2 | C1 | H2 | 109.5° | 109.4° |
| C2 | C1 | H3 | 109.5° | 109.5° |
| C1 | C2 | H4 | 108.5° | 109.5° |
| C1 | C2 | H5 | 108.5° | 109.4° |
| H1 | C1 | H2 | 109.5° | 109.5° |
| H1 | C1 | H3 | 109.4° | 109.5° |
| H2 | C1 | H3 | 109.5° | 109.5° |
| H4 | C2 | H5 | 109.5° | 109.5° |
| H6 | C4 | H7 | 109.5° | 109.4° |
| H6 | C4 | H8 | 109.5° | 109.5° |
| H7 | C4 | H8 | 109.5° | 109.4° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| N1 | C5 | C3 | C4 | 15.0° | 120.1° |
| N1 | C5 | C3 | C2 | 104.5° | 0.2° |
| N1 | C5 | C3 | O1 | 141.5° | 119.8° |
| C5 | C3 | C4 | C2 | 120.2° | 120.0° |
| C5 | C3 | C4 | O1 | 126.0° | 120.0° |
| C5 | C3 | C2 | O1 | 119.7° | 120.0° |
| C5 | C3 | C2 | C1 | 63.8° | 175.0° |
| C5 | C3 | C2 | H4 | 175.6° | 65.0° |
| C5 | C3 | C2 | H5 | 56.8° | 55.0° |
| C5 | C3 | C4 | H6 | 180.0° | 179.9° |
| C5 | C3 | C4 | H7 | 60.0° | 60.0° |
| C5 | C3 | C4 | H8 | 60.0° | 60.0° |
| C5 | C3 | O1 | H9 | 180.0° | 60.0° |
| C4 | C3 | C2 | O1 | 120.1° | 120.0° |
| C4 | C3 | C2 | C1 | 176.0° | 55.0° |
| C4 | C3 | C2 | H4 | 55.4° | 175.0° |
| C4 | C3 | C2 | H5 | 63.4° | 65.0° |
| C3 | C4 | H6 | H7 | 120.0° | 120.0° |
| C3 | C4 | H6 | H8 | 120.0° | 120.1° |
| C3 | C4 | H7 | H8 | 120.0° | 120.0° |
| C4 | C3 | O1 | H9 | 55.2° | 180.0° |
| C3 | C2 | C1 | H4 | 120.6° | 120.0° |
| C3 | C2 | C1 | H5 | 120.6° | 120.0° |
| C3 | C2 | C1 | H1 | 180.0° | 60.0° |
| C3 | C2 | C1 | H2 | 60.0° | 60.0° |
| C3 | C2 | C1 | H3 | 60.0° | 180.0° |
| C3 | C2 | H4 | H5 | 118.2° | 120.0° |
| C2 | C3 | C4 | H6 | 59.8° | 60.0° |
| C2 | C3 | C4 | H7 | 179.8° | 180.0° |
| C2 | C3 | C4 | H8 | 60.2° | 60.0° |
| C2 | C3 | O1 | H9 | 61.9° | 60.0° |
| O1 | C3 | C2 | C1 | 55.8° | 65.0° |
| O1 | C3 | C2 | H4 | 64.7° | 55.0° |
| O1 | C3 | C2 | H5 | 176.4° | 175.0° |
| O1 | C3 | C4 | H6 | 54.0° | 59.9° |
| O1 | C3 | C4 | H7 | 66.1° | 60.0° |
| O1 | C3 | C4 | H8 | 174.0° | 180.0° |
| C2 | C1 | H1 | H2 | 120.0° | 119.9° |
| C2 | C1 | H1 | H3 | 120.0° | 120.0° |
| C2 | C1 | H2 | H3 | 120.0° | 120.0° |
| C1 | C2 | H4 | H5 | 118.2° | 120.0° |
| H1 | C1 | H2 | H3 | 120.0° | 120.0° |
| H1 | C1 | C2 | H4 | 59.4° | 60.0° |
| H1 | C1 | C2 | H5 | 59.4° | 180.0° |
| H2 | C1 | C2 | H4 | 179.4° | 180.0° |
| H2 | C1 | C2 | H5 | 60.6° | 60.0° |
| H3 | C1 | C2 | H4 | 60.6° | 60.0° |
| H3 | C1 | C2 | H5 | 179.4° | 60.0° |
| H6 | C4 | H7 | H8 | 120.0° | 120.0° |
