5X
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
S19 | O20 | doub | 1.42Å | 1.44Å | |
S19 | O21 | doub | 1.42Å | 1.43Å | |
S19 | N22 | sing | 1.66Å | 1.76Å | |
S19 | C24 | sing | 1.76Å | 1.79Å | |
N22 | N1 | sing | 1.40Å | 1.50Å | |
N22 | H22 | sing | 0.97Å | 1.00Å | |
C24 | C25 | sing | 1.38Å | 1.42Å | Aromatic |
C24 | C30 | doub | 1.38Å | 1.41Å | Aromatic |
C25 | C26 | doub | 1.38Å | 1.41Å | Aromatic |
C25 | H25 | sing | 1.08Å | 1.08Å | |
C26 | C27 | sing | 1.38Å | 1.41Å | Aromatic |
C26 | H26 | sing | 1.08Å | 1.08Å | |
C27 | C29 | doub | 1.38Å | 1.41Å | Aromatic |
C27 | H27 | sing | 1.08Å | 1.08Å | |
C29 | C30 | sing | 1.38Å | 1.40Å | Aromatic |
C29 | H29 | sing | 1.08Å | 1.08Å | |
C30 | H30 | sing | 1.08Å | 1.08Å | |
C1 | C2 | sing | 1.51Å | 1.53Å | |
C1 | C14 | sing | 1.53Å | 1.58Å | |
C1 | H11A | sing | 1.09Å | 1.10Å | |
C1 | H12 | sing | 1.09Å | 1.10Å | |
C2 | C3 | doub | 1.33Å | 1.36Å | |
C2 | C4 | sing | 1.51Å | 1.52Å | |
N1 | C9 | sing | 1.33Å | 1.33Å | |
N1 | C7 | sing | 1.32Å | 1.33Å | |
C9 | S1 | sing | 1.77Å | 1.76Å | |
C9 | S2 | doub | 1.71Å | 1.68Å | |
C14 | C7 | sing | 1.51Å | 1.53Å | |
C14 | S1 | sing | 1.82Å | 1.76Å | |
C14 | H14 | sing | 1.09Å | 1.10Å | |
C7 | O1 | doub | 1.21Å | 1.25Å | |
C3 | C5 | sing | 1.48Å | 1.51Å | |
C3 | H3 | sing | 1.08Å | 1.08Å | |
C4 | H41 | sing | 1.09Å | 1.10Å | |
C4 | H42 | sing | 1.09Å | 1.10Å | |
C4 | H43 | sing | 1.09Å | 1.10Å | |
C5 | C6 | sing | 1.40Å | 1.41Å | Aromatic |
C5 | C8 | doub | 1.40Å | 1.41Å | Aromatic |
C6 | C11 | doub | 1.38Å | 1.40Å | Aromatic |
C6 | H6 | sing | 1.08Å | 1.08Å | |
C8 | C10 | sing | 1.38Å | 1.40Å | Aromatic |
C8 | H8 | sing | 1.08Å | 1.08Å | |
C10 | C13 | doub | 1.38Å | 1.40Å | Aromatic |
C10 | H10 | sing | 1.08Å | 1.08Å | |
C11 | C13 | sing | 1.38Å | 1.41Å | Aromatic |
C11 | H11 | sing | 1.08Å | 1.08Å | |
C13 | H13 | sing | 1.08Å | 1.08Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O20 | S19 | O21 | 120.3° | 123.1° |
O20 | S19 | N22 | 105.7° | 106.4° |
O20 | S19 | C24 | 109.6° | 106.4° |
O21 | S19 | N22 | 103.4° | 106.4° |
O21 | S19 | C24 | 110.5° | 106.4° |
N22 | S19 | C24 | 106.3° | 107.2° |
S19 | N22 | N1 | 116.1° | 120.0° |
S19 | N22 | H22 | 107.3° | 120.0° |
S19 | C24 | C25 | 120.3° | 120.0° |
S19 | C24 | C30 | 119.8° | 120.0° |
N1 | N22 | H22 | 107.3° | 120.0° |
N22 | N1 | C9 | 123.7° | 119.4° |
N22 | N1 | C7 | 124.8° | 119.4° |
C25 | C24 | C30 | 119.9° | 120.0° |
C24 | C25 | C26 | 119.7° | 120.0° |
C24 | C25 | H25 | 120.1° | 120.0° |
C24 | C30 | C29 | 120.2° | 120.0° |
C24 | C30 | H30 | 119.9° | 120.0° |
C26 | C25 | H25 | 120.1° | 120.0° |
C25 | C26 | C27 | 120.0° | 120.0° |
C25 | C26 | H26 | 120.0° | 120.0° |
C27 | C26 | H26 | 120.0° | 120.0° |
C26 | C27 | C29 | 120.3° | 120.0° |
C26 | C27 | H27 | 119.9° | 120.1° |
C29 | C27 | H27 | 119.8° | 120.0° |
C27 | C29 | C30 | 119.9° | 120.0° |
C27 | C29 | H29 | 120.1° | 120.0° |
C30 | C29 | H29 | 120.1° | 120.0° |
C29 | C30 | H30 | 119.9° | 120.0° |
C2 | C1 | C14 | 119.2° | 109.5° |
C2 | C1 | H11A | 104.1° | 109.4° |
C2 | C1 | H12 | 106.4° | 109.5° |
C1 | C2 | C3 | 117.5° | 120.0° |
C1 | C2 | C4 | 116.7° | 120.1° |
C14 | C1 | H11A | 104.1° | 109.5° |
C14 | C1 | H12 | 106.3° | 109.5° |
C1 | C14 | C7 | 108.7° | 110.7° |
C1 | C14 | S1 | 116.2° | 110.8° |
C1 | C14 | H14 | 103.4° | 110.6° |
H11A | C1 | H12 | 117.4° | 109.5° |
C3 | C2 | C4 | 125.7° | 120.0° |
C2 | C3 | C5 | 131.5° | 120.0° |
C2 | C3 | H3 | 114.2° | 120.0° |
C2 | C4 | H41 | 109.4° | 109.5° |
C2 | C4 | H42 | 109.5° | 109.4° |
C2 | C4 | H43 | 109.5° | 109.4° |
C9 | N1 | C7 | 111.4° | 121.3° |
N1 | C9 | S1 | 113.1° | 107.7° |
N1 | C9 | S2 | 126.8° | 126.2° |
N1 | C7 | C14 | 117.7° | 113.8° |
N1 | C7 | O1 | 119.3° | 123.1° |
S1 | C9 | S2 | 119.9° | 126.2° |
C9 | S1 | C14 | 91.7° | 94.3° |
C7 | C14 | S1 | 102.4° | 103.0° |
C7 | C14 | H14 | 117.1° | 110.7° |
C14 | C7 | O1 | 123.0° | 123.1° |
S1 | C14 | H14 | 109.6° | 110.8° |
C5 | C3 | H3 | 114.2° | 120.0° |
C3 | C5 | C6 | 114.0° | 120.1° |
C3 | C5 | C8 | 126.3° | 120.1° |
H41 | C4 | H42 | 109.5° | 109.6° |
H41 | C4 | H43 | 109.5° | 109.5° |
H42 | C4 | H43 | 109.4° | 109.5° |
C6 | C5 | C8 | 119.7° | 119.7° |
C5 | C6 | C11 | 120.0° | 119.8° |
C5 | C6 | H6 | 120.0° | 120.1° |
C5 | C8 | C10 | 119.9° | 119.9° |
C5 | C8 | H8 | 120.1° | 120.1° |
C11 | C6 | H6 | 120.0° | 120.1° |
C6 | C11 | C13 | 120.1° | 120.1° |
C6 | C11 | H11 | 119.9° | 119.9° |
C10 | C8 | H8 | 120.1° | 120.1° |
C8 | C10 | C13 | 120.1° | 120.1° |
C8 | C10 | H10 | 119.9° | 120.0° |
C13 | C10 | H10 | 120.0° | 119.9° |
C10 | C13 | C11 | 120.3° | 120.3° |
C10 | C13 | H13 | 119.9° | 119.9° |
C13 | C11 | H11 | 120.0° | 120.0° |
C11 | C13 | H13 | 119.9° | 119.8° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O20 | S19 | O21 | N22 | 117.5° | 123.0° |
O20 | S19 | O21 | C24 | 129.2° | 122.9° |
O20 | S19 | N22 | C24 | 116.4° | 113.6° |
O20 | S19 | N22 | N1 | 144.4° | 173.6° |
O20 | S19 | N22 | H22 | 24.5° | 6.4° |
O20 | S19 | C24 | C25 | 157.5° | 23.6° |
O20 | S19 | C24 | C30 | 22.5° | 156.1° |
O21 | S19 | N22 | C24 | 116.3° | 113.5° |
O21 | S19 | N22 | N1 | 17.2° | 53.5° |
O21 | S19 | N22 | H22 | 102.8° | 126.5° |
O21 | S19 | C24 | C25 | 22.8° | 156.5° |
O21 | S19 | C24 | C30 | 157.2° | 23.3° |
S19 | N22 | N1 | H22 | 120.0° | 180.0° |
N22 | S19 | C24 | C25 | 88.7° | 90.0° |
N22 | S19 | C24 | C30 | 91.4° | 90.3° |
S19 | N22 | N1 | C9 | 99.4° | 90.0° |
S19 | N22 | N1 | C7 | 84.0° | 90.2° |
C24 | S19 | N22 | N1 | 99.1° | 60.0° |
C24 | S19 | N22 | H22 | 140.9° | 120.0° |
S19 | C24 | C25 | C30 | 180.0° | 179.7° |
S19 | C24 | C25 | C26 | 179.9° | 180.0° |
S19 | C24 | C25 | H25 | 0.1° | 0.0° |
S19 | C24 | C30 | C29 | 179.9° | 179.7° |
S19 | C24 | C30 | H30 | 0.1° | 0.0° |
N22 | N1 | C9 | C7 | 177.0° | 179.8° |
N22 | N1 | C9 | S1 | 166.6° | 180.0° |
N22 | N1 | C9 | S2 | 8.9° | 0.0° |
N22 | N1 | C7 | C14 | 178.9° | 180.0° |
N22 | N1 | C7 | O1 | 3.0° | 0.0° |
H22 | N22 | N1 | C9 | 20.5° | 90.0° |
H22 | N22 | N1 | C7 | 156.0° | 89.8° |
C24 | C25 | C26 | H25 | 180.0° | 180.0° |
C24 | C25 | C26 | C27 | 0.2° | 0.1° |
C24 | C25 | C26 | H26 | 179.8° | 180.0° |
C25 | C24 | C30 | C29 | 0.1° | 0.5° |
C25 | C24 | C30 | H30 | 179.9° | 179.7° |
C30 | C24 | C25 | C26 | 0.1° | 0.2° |
C30 | C24 | C25 | H25 | 179.8° | 179.7° |
C24 | C30 | C29 | C27 | 0.1° | 0.5° |
C24 | C30 | C29 | H30 | 180.0° | 179.7° |
C24 | C30 | C29 | H29 | 179.9° | 179.7° |
C25 | C26 | C27 | H26 | 180.0° | 179.9° |
C25 | C26 | C27 | C29 | 0.2° | 0.1° |
C25 | C26 | C27 | H27 | 179.8° | 180.0° |
H25 | C25 | C26 | C27 | 179.8° | 180.0° |
H25 | C25 | C26 | H26 | 0.2° | 0.1° |
C26 | C27 | C29 | H27 | 180.0° | 180.0° |
C26 | C27 | C29 | C30 | 0.2° | 0.2° |
C26 | C27 | C29 | H29 | 179.9° | 180.0° |
H26 | C26 | C27 | C29 | 179.8° | 180.0° |
H26 | C26 | C27 | H27 | 0.2° | 0.0° |
C27 | C29 | C30 | H29 | 180.0° | 179.8° |
C27 | C29 | C30 | H30 | 179.9° | 179.8° |
H27 | C27 | C29 | C30 | 179.8° | 179.8° |
H27 | C27 | C29 | H29 | 0.1° | 0.0° |
H29 | C29 | C30 | H30 | 0.1° | 0.0° |
C2 | C1 | C14 | H11A | 115.4° | 120.0° |
C2 | C1 | C14 | H12 | 120.0° | 120.0° |
C2 | C1 | H11A | H12 | 117.3° | 120.0° |
C1 | C2 | C3 | C4 | 177.7° | 180.0° |
C2 | C1 | C14 | C7 | 54.6° | 175.0° |
C2 | C1 | C14 | S1 | 60.2° | 71.3° |
C2 | C1 | C14 | H14 | 179.6° | 51.9° |
C1 | C2 | C3 | C5 | 177.1° | 172.7° |
C1 | C2 | C3 | H3 | 2.9° | 7.2° |
C1 | C2 | C4 | H41 | 109.3° | 92.7° |
C1 | C2 | C4 | H42 | 130.6° | 147.2° |
C1 | C2 | C4 | H43 | 10.7° | 27.3° |
C14 | C1 | H11A | H12 | 117.2° | 120.0° |
C14 | C1 | C2 | C3 | 118.7° | 95.0° |
C14 | C1 | C2 | C4 | 63.5° | 85.0° |
C1 | C14 | C7 | N1 | 132.9° | 118.4° |
C1 | C14 | S1 | C9 | 132.9° | 118.4° |
C1 | C14 | C7 | S1 | 123.5° | 118.5° |
C1 | C14 | C7 | H14 | 116.6° | 123.1° |
C1 | C14 | S1 | H14 | 116.8° | 123.2° |
C1 | C14 | C7 | O1 | 49.0° | 61.6° |
H11A | C1 | C2 | C3 | 126.0° | 145.0° |
H11A | C1 | C2 | C4 | 51.9° | 35.0° |
H11A | C1 | C14 | C7 | 169.9° | 65.0° |
H11A | C1 | C14 | S1 | 55.2° | 48.6° |
H11A | C1 | C14 | H14 | 65.0° | 171.9° |
H12 | C1 | C2 | C3 | 1.3° | 25.0° |
H12 | C1 | C2 | C4 | 176.5° | 155.0° |
H12 | C1 | C14 | C7 | 65.4° | 55.0° |
H12 | C1 | C14 | S1 | 179.8° | 168.6° |
H12 | C1 | C14 | H14 | 59.6° | 68.1° |
C2 | C3 | C5 | H3 | 180.0° | 179.9° |
C3 | C2 | C4 | H41 | 73.0° | 87.3° |
C3 | C2 | C4 | H42 | 47.0° | 32.8° |
C3 | C2 | C4 | H43 | 167.0° | 152.7° |
C2 | C3 | C5 | C6 | 179.5° | 41.2° |
C2 | C3 | C5 | C8 | 1.7° | 139.2° |
C4 | C2 | C3 | C5 | 0.6° | 7.3° |
C4 | C2 | C3 | H3 | 179.4° | 172.8° |
C2 | C4 | H41 | H42 | 120.0° | 120.0° |
C2 | C4 | H41 | H43 | 120.0° | 119.9° |
C2 | C4 | H42 | H43 | 120.0° | 119.9° |
N1 | C9 | S1 | S2 | 175.9° | 180.0° |
C9 | N1 | C7 | C14 | 4.1° | 0.2° |
N1 | C9 | S1 | C14 | 19.3° | 0.1° |
C9 | N1 | C7 | O1 | 174.0° | 179.7° |
C7 | N1 | C9 | S1 | 16.4° | 0.2° |
C7 | N1 | C9 | S2 | 168.0° | 179.8° |
N1 | C7 | C14 | O1 | 178.0° | 180.0° |
N1 | C7 | C14 | S1 | 9.4° | 0.1° |
N1 | C7 | C14 | H14 | 110.5° | 118.6° |
C9 | S1 | C14 | C7 | 14.6° | 0.0° |
C9 | S1 | C14 | H14 | 110.4° | 118.4° |
S2 | C9 | S1 | C14 | 164.8° | 179.9° |
C7 | C14 | S1 | H14 | 125.0° | 118.4° |
S1 | C14 | C7 | O1 | 172.5° | 179.9° |
H14 | C14 | C7 | O1 | 67.5° | 61.4° |
C3 | C5 | C6 | C8 | 178.9° | 179.7° |
C3 | C5 | C6 | C11 | 179.3° | 180.0° |
C3 | C5 | C6 | H6 | 0.7° | 0.1° |
C3 | C5 | C8 | C10 | 179.0° | 180.0° |
C3 | C5 | C8 | H8 | 1.0° | 0.0° |
H3 | C3 | C5 | C6 | 0.5° | 138.8° |
H3 | C3 | C5 | C8 | 178.3° | 40.9° |
H41 | C4 | H42 | H43 | 120.0° | 120.1° |
C5 | C6 | C11 | H6 | 180.0° | 179.9° |
C6 | C5 | C8 | C10 | 0.3° | 0.3° |
C6 | C5 | C8 | H8 | 179.7° | 179.7° |
C5 | C6 | C11 | C13 | 0.5° | 0.0° |
C5 | C6 | C11 | H11 | 179.5° | 179.9° |
C8 | C5 | C6 | C11 | 0.4° | 0.3° |
C8 | C5 | C6 | H6 | 179.6° | 179.8° |
C5 | C8 | C10 | H8 | 180.0° | 180.0° |
C5 | C8 | C10 | C13 | 0.2° | 0.1° |
C5 | C8 | C10 | H10 | 179.8° | 179.9° |
C6 | C11 | C13 | C10 | 0.4° | 0.2° |
C6 | C11 | C13 | H11 | 180.0° | 180.0° |
C6 | C11 | C13 | H13 | 179.6° | 180.0° |
H6 | C6 | C11 | C13 | 179.5° | 180.0° |
H6 | C6 | C11 | H11 | 0.4° | 0.0° |
C8 | C10 | C13 | H10 | 180.0° | 179.9° |
C8 | C10 | C13 | C11 | 0.2° | 0.2° |
C8 | C10 | C13 | H13 | 179.8° | 180.0° |
H8 | C8 | C10 | C13 | 179.8° | 179.9° |
H8 | C8 | C10 | H10 | 0.2° | 0.1° |
C10 | C13 | C11 | H13 | 180.0° | 179.8° |
C10 | C13 | C11 | H11 | 179.6° | 179.8° |
H10 | C10 | C13 | C11 | 179.8° | 179.7° |
H10 | C10 | C13 | H13 | 0.2° | 0.1° |
H11 | C11 | C13 | H13 | 0.4° | 0.0° |