5T3
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N | CA | sing | 1.47Å | 1.47Å | |
| CA | CB | sing | 1.53Å | 1.52Å | |
| CA | C | sing | 1.51Å | 1.52Å | |
| CG | CB | sing | 1.53Å | 1.50Å | |
| CG | CD | sing | 1.53Å | 1.52Å | |
| CH2 | NZ | sing | 1.47Å | 1.47Å | |
| CH2 | CT2 | sing | 1.53Å | 1.50Å | |
| CD | CE | sing | 1.53Å | 1.51Å | |
| C | O | doub | 1.21Å | 1.21Å | |
| CE | NZ | sing | 1.47Å | 1.47Å | |
| NZ | CH1 | sing | 1.47Å | 1.48Å | |
| CH1 | CT3 | sing | 1.53Å | 1.52Å | |
| CH1 | CT1 | sing | 1.53Å | 1.52Å | |
| N | H2 | sing | 1.01Å | 1.00Å | |
| N | H | sing | 1.01Å | 1.00Å | |
| CA | HA | sing | 1.09Å | 1.10Å | |
| CB | HB2 | sing | 1.09Å | 1.10Å | |
| CB | HB3 | sing | 1.09Å | 1.10Å | |
| CG | HG2 | sing | 1.09Å | 1.10Å | |
| CG | HG3 | sing | 1.09Å | 1.10Å | |
| CD | HD2 | sing | 1.09Å | 1.10Å | |
| CD | HD3 | sing | 1.09Å | 1.10Å | |
| CE | HE2 | sing | 1.09Å | 1.10Å | |
| CE | HE3 | sing | 1.09Å | 1.10Å | |
| CH1 | H15 | sing | 1.09Å | 1.10Å | |
| CH2 | H16 | sing | 1.09Å | 1.10Å | |
| CH2 | H17 | sing | 1.09Å | 1.10Å | |
| CT1 | H18 | sing | 1.09Å | 1.10Å | |
| CT1 | H19 | sing | 1.09Å | 1.10Å | |
| CT1 | H20 | sing | 1.09Å | 1.10Å | |
| CT2 | H21 | sing | 1.09Å | 1.10Å | |
| CT2 | H22 | sing | 1.09Å | 1.10Å | |
| CT2 | H23 | sing | 1.09Å | 1.10Å | |
| CT3 | H24 | sing | 1.09Å | 1.10Å | |
| CT3 | H25 | sing | 1.09Å | 1.10Å | |
| CT3 | H26 | sing | 1.09Å | 1.10Å | |
| C | OXT | sing | 1.34Å | 1.32Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| N | CA | CB | 116.2° | 109.5° |
| N | CA | C | 101.3° | 109.5° |
| CA | N | H2 | 109.5° | 111.0° |
| CA | N | H | 109.5° | 111.0° |
| N | CA | HA | 110.0° | 109.5° |
| CB | CA | C | 110.2° | 109.5° |
| CA | CB | CG | 105.3° | 109.5° |
| CB | CA | HA | 109.4° | 109.4° |
| CA | CB | HB2 | 110.5° | 109.4° |
| CA | CB | HB3 | 110.5° | 109.5° |
| CA | C | O | 122.2° | 120.0° |
| C | CA | HA | 109.4° | 109.5° |
| CA | C | OXT | 116.1° | 120.0° |
| CB | CG | CD | 114.3° | 109.5° |
| CG | CB | HB2 | 110.5° | 109.5° |
| CG | CB | HB3 | 110.5° | 109.5° |
| CB | CG | HG2 | 108.2° | 109.5° |
| CB | CG | HG3 | 108.2° | 109.5° |
| CG | CD | CE | 115.1° | 109.5° |
| CD | CG | HG2 | 108.2° | 109.5° |
| CD | CG | HG3 | 108.2° | 109.4° |
| CG | CD | HD2 | 108.0° | 109.5° |
| CG | CD | HD3 | 108.1° | 109.4° |
| NZ | CH2 | CT2 | 117.7° | 109.5° |
| CH2 | NZ | CE | 116.3° | 111.0° |
| CH2 | NZ | CH1 | 114.3° | 111.0° |
| NZ | CH2 | H16 | 107.4° | 109.5° |
| NZ | CH2 | H17 | 107.4° | 109.4° |
| CT2 | CH2 | H16 | 107.3° | 109.5° |
| CT2 | CH2 | H17 | 107.4° | 109.5° |
| CH2 | CT2 | H21 | 109.5° | 109.4° |
| CH2 | CT2 | H22 | 109.5° | 109.5° |
| CH2 | CT2 | H23 | 109.5° | 109.5° |
| CD | CE | NZ | 111.1° | 109.5° |
| CE | CD | HD2 | 108.0° | 109.5° |
| CE | CD | HD3 | 108.1° | 109.5° |
| CD | CE | HE2 | 109.1° | 109.5° |
| CD | CE | HE3 | 109.0° | 109.5° |
| O | C | OXT | 121.7° | 120.0° |
| CE | NZ | CH1 | 115.6° | 111.0° |
| NZ | CE | HE2 | 109.1° | 109.5° |
| NZ | CE | HE3 | 109.0° | 109.4° |
| NZ | CH1 | CT3 | 111.1° | 109.5° |
| NZ | CH1 | CT1 | 111.7° | 109.5° |
| NZ | CH1 | H15 | 107.6° | 109.5° |
| CT3 | CH1 | CT1 | 112.0° | 109.5° |
| CT3 | CH1 | H15 | 107.0° | 109.4° |
| CH1 | CT3 | H24 | 109.5° | 109.5° |
| CH1 | CT3 | H25 | 109.5° | 109.5° |
| CH1 | CT3 | H26 | 109.4° | 109.5° |
| CT1 | CH1 | H15 | 107.1° | 109.4° |
| CH1 | CT1 | H18 | 109.5° | 109.5° |
| CH1 | CT1 | H19 | 109.5° | 109.5° |
| CH1 | CT1 | H20 | 109.5° | 109.5° |
| H2 | N | H | 109.4° | 111.0° |
| HB2 | CB | HB3 | 109.4° | 109.4° |
| HG2 | CG | HG3 | 109.5° | 109.5° |
| HD2 | CD | HD3 | 109.5° | 109.5° |
| HE2 | CE | HE3 | 109.5° | 109.4° |
| H16 | CH2 | H17 | 109.5° | 109.4° |
| H18 | CT1 | H19 | 109.4° | 109.5° |
| H18 | CT1 | H20 | 109.4° | 109.5° |
| H19 | CT1 | H20 | 109.5° | 109.4° |
| H21 | CT2 | H22 | 109.5° | 109.5° |
| H21 | CT2 | H23 | 109.5° | 109.4° |
| H22 | CT2 | H23 | 109.5° | 109.5° |
| H24 | CT3 | H25 | 109.5° | 109.4° |
| H24 | CT3 | H26 | 109.5° | 109.5° |
| H25 | CT3 | H26 | 109.4° | 109.4° |
| C | OXT | HXT | 109.5° | 117.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| N | CA | CB | C | 114.4° | 120.0° |
| N | CA | CB | HA | 125.3° | 120.0° |
| N | CA | C | HA | 116.1° | 120.0° |
| N | CA | CB | CG | 165.8° | 65.0° |
| N | CA | C | O | 88.8° | 20.0° |
| CA | N | H2 | H | 120.0° | 124.0° |
| N | CA | CB | HB2 | 46.4° | 55.0° |
| N | CA | CB | HB3 | 74.8° | 175.0° |
| N | CA | C | OXT | 89.3° | 160.0° |
| CB | CA | C | HA | 120.3° | 120.0° |
| CA | CB | CG | HB2 | 119.4° | 120.0° |
| CA | CB | CG | HB3 | 119.4° | 120.0° |
| CA | CB | CG | CD | 165.9° | 180.0° |
| CB | CA | C | O | 34.7° | 100.0° |
| CB | CA | N | H2 | 180.0° | 60.0° |
| CB | CA | N | H | 60.0° | 64.0° |
| CA | CB | HB2 | HB3 | 121.9° | 120.0° |
| CA | CB | CG | HG2 | 73.4° | 60.0° |
| CA | CB | CG | HG3 | 45.2° | 60.0° |
| CB | CA | C | OXT | 147.2° | 80.0° |
| C | CA | CB | CG | 79.8° | 175.0° |
| CA | C | O | OXT | 178.0° | 180.0° |
| C | CA | N | H2 | 60.6° | 60.0° |
| C | CA | N | H | 59.3° | 176.0° |
| C | CA | CB | HB2 | 160.8° | 65.0° |
| C | CA | CB | HB3 | 39.5° | 55.0° |
| CA | C | OXT | HXT | 178.1° | 180.0° |
| CB | CG | CD | HG2 | 120.7° | 120.0° |
| CB | CG | CD | HG3 | 120.7° | 120.0° |
| CB | CG | CD | CE | 0.3° | NaN° |
| CG | CB | CA | HA | 40.5° | 55.0° |
| CG | CB | HB2 | HB3 | 121.9° | 120.0° |
| CB | CG | HG2 | HG3 | 117.8° | 120.0° |
| CB | CG | CD | HD2 | 121.1° | 60.0° |
| CB | CG | CD | HD3 | 120.5° | 60.0° |
| CG | CD | CE | HD2 | 120.8° | 120.0° |
| CG | CD | CE | HD3 | 120.8° | 119.9° |
| CG | CD | CE | NZ | 172.4° | 180.0° |
| CD | CG | CB | HB2 | 46.5° | 60.0° |
| CD | CG | CB | HB3 | 74.7° | 60.0° |
| CD | CG | HG2 | HG3 | 117.8° | 120.0° |
| CG | CD | HD2 | HD3 | 117.5° | 120.0° |
| CG | CD | CE | HE2 | 52.2° | 60.0° |
| CG | CD | CE | HE3 | 67.3° | 60.0° |
| NZ | CH2 | CT2 | H16 | 121.2° | 120.0° |
| NZ | CH2 | CT2 | H17 | 121.2° | 120.0° |
| CH2 | NZ | CE | CD | 127.4° | 66.0° |
| CH2 | NZ | CE | CH1 | 138.3° | 124.0° |
| CH2 | NZ | CH1 | CT3 | 129.3° | 166.5° |
| CH2 | NZ | CH1 | CT1 | 104.7° | 73.5° |
| CH2 | NZ | CE | HE2 | 7.1° | 54.0° |
| CH2 | NZ | CE | HE3 | 112.4° | 173.9° |
| CH2 | NZ | CH1 | H15 | 12.5° | 46.5° |
| NZ | CH2 | H16 | H17 | 116.3° | 119.9° |
| NZ | CH2 | CT2 | H21 | 180.0° | 65.9° |
| NZ | CH2 | CT2 | H22 | 60.0° | 54.1° |
| NZ | CH2 | CT2 | H23 | 60.0° | 174.1° |
| CT2 | CH2 | NZ | CE | 96.8° | 164.8° |
| CT2 | CH2 | NZ | CH1 | 42.0° | 71.2° |
| CT2 | CH2 | H16 | H17 | 116.3° | 120.1° |
| CH2 | CT2 | H21 | H22 | 120.0° | 120.0° |
| CH2 | CT2 | H21 | H23 | 120.0° | 120.0° |
| CH2 | CT2 | H22 | H23 | 120.0° | 120.0° |
| CD | CE | NZ | HE2 | 120.2° | 120.0° |
| CD | CE | NZ | HE3 | 120.2° | 120.0° |
| CD | CE | NZ | CH1 | 94.3° | 170.0° |
| CE | CD | CG | HG2 | 120.4° | 60.0° |
| CE | CD | CG | HG3 | 121.0° | 60.0° |
| CE | CD | HD2 | HD3 | 117.5° | 120.0° |
| CD | CE | HE2 | HE3 | 119.3° | 120.0° |
| O | C | CA | HA | 155.1° | 140.0° |
| O | C | OXT | HXT | 0.0° | 0.0° |
| CE | NZ | CH1 | CT3 | 91.5° | 69.6° |
| CE | NZ | CH1 | CT1 | 34.4° | 50.4° |
| NZ | CE | CD | HD2 | 66.8° | 60.0° |
| NZ | CE | CD | HD3 | 51.6° | 60.1° |
| NZ | CE | HE2 | HE3 | 119.2° | 119.9° |
| CE | NZ | CH1 | H15 | 151.6° | 170.4° |
| CE | NZ | CH2 | H16 | 142.0° | 44.8° |
| CE | NZ | CH2 | H17 | 24.4° | 75.1° |
| NZ | CH1 | CT3 | CT1 | 125.8° | 120.0° |
| NZ | CH1 | CT3 | H15 | 117.2° | 120.0° |
| NZ | CH1 | CT1 | H15 | 117.5° | 120.0° |
| CH1 | NZ | CE | HE2 | 145.4° | 70.0° |
| CH1 | NZ | CE | HE3 | 25.9° | 50.0° |
| CH1 | NZ | CH2 | H16 | 79.2° | 168.8° |
| CH1 | NZ | CH2 | H17 | 163.2° | 48.9° |
| NZ | CH1 | CT1 | H18 | 180.0° | 60.0° |
| NZ | CH1 | CT1 | H19 | 60.0° | 180.0° |
| NZ | CH1 | CT1 | H20 | 60.0° | 60.0° |
| NZ | CH1 | CT3 | H24 | 180.0° | 62.5° |
| NZ | CH1 | CT3 | H25 | 60.0° | 177.5° |
| NZ | CH1 | CT3 | H26 | 60.0° | 57.6° |
| CT3 | CH1 | CT1 | H15 | 117.1° | 119.9° |
| CT3 | CH1 | CT1 | H18 | 54.6° | 60.0° |
| CT3 | CH1 | CT1 | H19 | 174.6° | 60.0° |
| CT3 | CH1 | CT1 | H20 | 65.4° | 179.9° |
| CH1 | CT3 | H24 | H25 | 120.0° | 120.0° |
| CH1 | CT3 | H24 | H26 | 120.0° | 120.0° |
| CH1 | CT3 | H25 | H26 | 120.0° | 120.0° |
| CH1 | CT1 | H18 | H19 | 120.0° | 120.0° |
| CH1 | CT1 | H18 | H20 | 120.0° | 120.1° |
| CH1 | CT1 | H19 | H20 | 120.0° | 120.0° |
| CT1 | CH1 | CT3 | H24 | 54.3° | 177.5° |
| CT1 | CH1 | CT3 | H25 | 65.8° | 57.5° |
| CT1 | CH1 | CT3 | H26 | 174.3° | 62.4° |
| H2 | N | CA | HA | 55.0° | 180.0° |
| H | N | CA | HA | 175.0° | 56.0° |
| HA | CA | CB | HB2 | 78.9° | 175.0° |
| HA | CA | CB | HB3 | 159.8° | 65.1° |
| HA | CA | C | OXT | 26.8° | 40.0° |
| HB2 | CB | CG | HG2 | 167.2° | 180.0° |
| HB2 | CB | CG | HG3 | 74.2° | 59.9° |
| HB3 | CB | CG | HG2 | 45.9° | 60.0° |
| HB3 | CB | CG | HG3 | 164.6° | 180.0° |
| HG2 | CG | CD | HD2 | 0.4° | 180.0° |
| HG2 | CG | CD | HD3 | 118.8° | 60.0° |
| HG3 | CG | CD | HD2 | 118.2° | 60.0° |
| HG3 | CG | CD | HD3 | 0.1° | 180.0° |
| HD2 | CD | CE | HE2 | 173.0° | 180.0° |
| HD2 | CD | CE | HE3 | 53.5° | 60.0° |
| HD3 | CD | CE | HE2 | 68.6° | 59.9° |
| HD3 | CD | CE | HE3 | 171.8° | 180.0° |
| H15 | CH1 | CT1 | H18 | 62.5° | 179.9° |
| H15 | CH1 | CT1 | H19 | 57.5° | 59.9° |
| H15 | CH1 | CT1 | H20 | 177.6° | 60.0° |
| H15 | CH1 | CT3 | H24 | 62.8° | 57.6° |
| H15 | CH1 | CT3 | H25 | 177.1° | 62.4° |
| H15 | CH1 | CT3 | H26 | 57.2° | 177.6° |
| H16 | CH2 | CT2 | H21 | 58.9° | 174.1° |
| H16 | CH2 | CT2 | H22 | 178.8° | 65.9° |
| H16 | CH2 | CT2 | H23 | 61.1° | 54.1° |
| H17 | CH2 | CT2 | H21 | 58.8° | 54.1° |
| H17 | CH2 | CT2 | H22 | 61.2° | 174.1° |
| H17 | CH2 | CT2 | H23 | 178.8° | 65.8° |
| H18 | CT1 | H19 | H20 | 120.0° | 120.0° |
| H21 | CT2 | H22 | H23 | 120.0° | 120.0° |
| H24 | CT3 | H25 | H26 | 120.0° | 120.0° |
