Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5SS

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C11N29doub1.32Å1.36ÅAromatic
C11C8sing1.38Å1.39ÅAromatic
N29C17sing1.32Å1.36ÅAromatic
C23C21sing1.53Å1.54Å
C23C25sing1.53Å1.54Å
N32C27sing1.47Å1.43Å
C21C24sing1.53Å1.54Å
C5C2doub1.38Å1.40ÅAromatic
C5C15sing1.38Å1.40ÅAromatic
C8C14doub1.40Å1.40ÅAromatic
C26C15sing1.51Å1.52Å
C26C28sing1.53Å1.56Å
C27C25sing1.53Å1.53Å
N33C28sing1.46Å1.46Å
N33C19sing1.35Å1.39Å
C24C19sing1.51Å1.51Å
C24C20sing1.53Å1.54Å
C2C1sing1.38Å1.40ÅAromatic
C25C22sing1.53Å1.54Å
C17C28sing1.51Å1.52Å
C17C10doub1.38Å1.39ÅAromatic
C15C6doub1.38Å1.40ÅAromatic
C19O34doub1.21Å1.22Å
C22C20sing1.53Å1.53Å
C14C10sing1.40Å1.40ÅAromatic
C14C13sing1.48Å1.45Å
C1C3doub1.38Å1.39ÅAromatic
C6C3sing1.38Å1.40ÅAromatic
C9C13doub1.39Å1.41ÅAromatic
C9C12sing1.40Å1.41ÅAromatic
C13C4sing1.40Å1.41ÅAromatic
O35C18sing1.36Å1.35Å
C12C18sing1.46Å1.41ÅAromatic
C12C16doub1.41Å1.41ÅAromatic
C4C7doub1.36Å1.41ÅAromatic
C18N30doub1.30Å1.34ÅAromatic
C16C7sing1.39Å1.41ÅAromatic
C16N31sing1.37Å1.38ÅAromatic
N30N31sing1.40Å1.35ÅAromatic
C20H1sing1.09Å1.10Å
C20H2sing1.09Å1.10Å
C21H3sing1.09Å1.10Å
C21H4sing1.09Å1.10Å
C22H5sing1.09Å1.10Å
C22H6sing1.09Å1.10Å
C23H7sing1.09Å1.10Å
C23H8sing1.09Å1.10Å
C24H9sing1.09Å1.10Å
C11H10sing1.08Å1.08Å
C27H11sing1.09Å1.10Å
C27H12sing1.09Å1.10Å
C1H13sing1.08Å1.08Å
C2H14sing1.08Å1.08Å
C3H15sing1.08Å1.08Å
C4H16sing1.08Å1.08Å
C5H17sing1.08Å1.08Å
C6H18sing1.08Å1.08Å
C7H19sing1.08Å1.08Å
C8H20sing1.08Å1.08Å
C9H21sing1.08Å1.08Å
C10H22sing1.08Å1.08Å
C25H23sing1.09Å1.10Å
C26H24sing1.09Å1.10Å
C26H25sing1.09Å1.10Å
C28H26sing1.09Å1.10Å
N32H27sing1.01Å1.00Å
N32H28sing1.01Å1.00Å
N33H30sing0.97Å1.00Å
N31H31sing0.97Å1.00Å
O35H29sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N29C11C8122.8°120.9°
C11N29C17117.8°122.0°
N29C11H10118.6°119.6°
C11C8C14118.0°119.0°
C8C11H10118.6°119.6°
C11C8H20121.0°120.5°
N29C17C28117.6°119.5°
N29C17C10123.3°120.9°
C21C23C25111.3°109.5°
C23C21C24111.5°109.5°
C23C21H3108.9°109.5°
C23C21H4108.9°109.5°
C21C23H7109.0°109.5°
C21C23H8109.0°109.4°
C23C25C27113.4°109.5°
C23C25C22110.1°109.5°
C25C23H7109.0°109.5°
C25C23H8109.0°109.4°
C23C25H23107.3°109.5°
N32C27C25109.7°109.5°
N32C27H11109.4°109.5°
N32C27H12109.4°109.5°
C27N32H27109.5°111.0°
C27N32H28109.5°111.0°
C21C24C19114.0°109.5°
C21C24C20112.9°109.5°
C24C21H3109.0°109.5°
C24C21H4109.0°109.4°
C21C24H9106.6°109.5°
C2C5C15119.3°120.0°
C5C2C1120.5°120.0°
C5C2H14119.7°120.0°
C2C5H17120.3°120.0°
C5C15C26120.2°120.0°
C5C15C6119.9°120.0°
C15C5H17120.4°120.0°
C8C14C10120.2°118.2°
C8C14C13119.3°120.9°
C14C8H20121.0°120.5°
C15C26C28110.3°109.4°
C26C15C6119.7°120.0°
C15C26H24109.2°109.5°
C15C26H25109.2°109.5°
C26C28N33111.1°109.5°
C26C28C17110.9°109.5°
C28C26H24109.3°109.5°
C28C26H25109.3°109.4°
C26C28H26105.7°109.5°
C27C25C22110.8°109.4°
C25C27H11109.4°109.4°
C25C27H12109.4°109.5°
C27C25H23107.5°109.5°
C28N33C19122.9°120.0°
N33C28C17115.6°109.5°
N33C28H26106.8°109.5°
C28N33H30118.5°120.0°
N33C19C24115.7°120.0°
N33C19O34124.5°120.0°
C19N33H30118.5°120.0°
C19C24C20109.4°109.5°
C24C19O34119.7°120.0°
C19C24H9106.9°109.5°
C24C20C22113.2°109.5°
C24C20H1108.6°109.5°
C24C20H2108.6°109.5°
C20C24H9106.6°109.4°
C2C1C3120.1°120.0°
C2C1H13119.9°120.0°
C1C2H14119.7°120.0°
C25C22C20110.8°109.4°
C25C22H5109.1°109.5°
C25C22H6109.1°109.5°
C22C25H23107.4°109.4°
C28C17C10118.8°119.6°
C17C28H26106.0°109.5°
C17C10C14117.7°119.0°
C17C10H22121.1°120.5°
C15C6C3120.8°120.0°
C15C6H18119.6°120.0°
C22C20H1108.5°109.5°
C22C20H2108.5°109.5°
C20C22H5109.1°109.5°
C20C22H6109.1°109.5°
C10C14C13120.2°120.9°
C14C10H22121.2°120.5°
C14C13C9119.0°119.9°
C14C13C4119.6°119.9°
C1C3C6119.3°120.0°
C3C1H13120.0°120.0°
C1C3H15120.3°120.0°
C6C3H15120.3°120.0°
C3C6H18119.6°120.0°
C13C9C12118.6°119.5°
C9C13C4120.9°120.2°
C13C9H21120.7°120.2°
C9C12C18135.7°133.9°
C9C12C16119.6°119.8°
C12C9H21120.7°120.3°
C13C4C7121.2°120.7°
C13C4H16119.4°119.6°
O35C18C12128.3°126.2°
O35C18N30119.8°126.2°
C18O35H29109.5°114.0°
C18C12C16104.8°106.3°
C12C18N30111.9°107.6°
C12C16C7122.6°119.7°
C12C16N31105.2°106.8°
C4C7C16117.0°120.2°
C7C4H16119.4°119.7°
C4C7H19121.5°119.9°
C18N30N31104.7°110.1°
C7C16N31132.1°133.6°
C16C7H19121.5°119.9°
C16N31N30113.4°109.2°
C16N31H31123.3°125.4°
N30N31H31123.3°125.4°
H1C20H2109.4°109.4°
H3C21H4109.5°109.5°
H5C22H6109.5°109.5°
H7C23H8109.5°109.5°
H11C27H12109.5°109.5°
H24C26H25109.5°109.5°
H27N32H28109.4°111.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N29C11C8H10180.0°179.9°
N29C11C8C141.5°0.2°
C11N29C17C28176.5°180.0°
C11N29C17C103.7°0.3°
N29C11C8H20178.5°180.0°
C8C11N29C171.6°0.1°
C11C8C14H20180.0°179.8°
C11C8C14C103.5°0.1°
C11C8C14C13176.3°179.8°
N29C17C28C2671.4°56.3°
N29C17C28N3356.2°63.7°
N29C17C28C10173.2°179.7°
N29C17C10C145.6°0.3°
C17N29C11H10178.4°180.0°
N29C17C10H22174.5°179.7°
N29C17C28H26174.3°176.3°
C21C23C25H7120.3°120.0°
C21C23C25H8120.3°120.0°
C23C21C24H3120.3°120.0°
C23C21C24H4120.3°120.0°
C21C23C25C27176.5°180.0°
C23C21C24C19175.4°180.0°
C23C21C24C2049.8°60.0°
C21C23C25C2258.7°60.0°
C23C21H3H4119.0°120.0°
C21C23H7H8119.2°120.0°
C23C21C24H966.9°60.0°
C21C23C25H2357.9°60.0°
C23C25C27N3254.5°175.0°
C25C23C21C2454.6°60.0°
C23C25C27C22124.4°120.0°
C23C25C27H23118.5°120.0°
C23C25C22H23116.6°120.0°
C23C25C22C2057.6°60.0°
C25C23C21H3174.9°180.0°
C25C23C21H465.8°60.0°
C23C25C22H5177.8°60.0°
C23C25C22H662.7°180.0°
C25C23H7H8119.2°120.0°
C23C25C27H11174.6°55.0°
C23C25C27H1265.5°64.9°
N32C27C25H11120.0°120.0°
N32C27C25H12120.0°120.1°
N32C27C25C22178.9°65.0°
N32C27H11H12119.9°120.1°
N32C27C25H2363.9°54.9°
C27N32H27H28120.0°123.9°
C21C24C19N33103.6°180.0°
C21C24C19C20127.5°120.0°
C21C24C19H9117.5°120.0°
C21C24C20H9116.7°120.0°
C21C24C19O3478.8°0.0°
C21C24C20C2249.8°60.0°
C21C24C20H1170.3°60.1°
C21C24C20H270.8°180.0°
C24C21H3H4119.1°119.9°
C24C21C23H7174.9°180.0°
C24C21C23H865.7°60.0°
C2C5C15H17180.0°179.9°
C2C5C15C26175.5°179.8°
C5C2C1H14180.0°180.0°
C2C5C15C61.9°0.0°
C5C2C1C30.2°0.0°
C5C2C1H13179.8°180.0°
C5C15C26C6173.7°179.7°
C5C15C26C28106.1°89.8°
C15C5C2C10.7°0.0°
C5C15C6C32.2°0.0°
C15C5C2H14179.3°180.0°
C5C15C6H18177.8°179.9°
C5C15C26H2414.0°30.3°
C5C15C26H25133.7°150.3°
C8C14C10C175.3°0.1°
C8C14C10C13172.8°179.9°
C8C14C13C923.6°0.4°
C8C14C13C4149.0°179.9°
C14C8C11H10178.5°179.8°
C8C14C10H22174.7°179.9°
C15C26C28H24120.1°120.0°
C15C26C28H25120.1°120.0°
C15C26C28N33174.1°65.0°
C15C26C28C1755.8°175.0°
C26C15C6C3175.9°179.7°
C26C15C5H174.5°0.3°
C26C15C6H184.1°0.2°
C15C26H24H25119.6°120.0°
C15C26C28H2658.7°55.0°
C26C28N33C17127.6°120.0°
C26C28N33H26114.8°120.0°
C26C28N33C19154.6°153.4°
C26C28C17H26114.3°120.0°
C26C28C17C10101.8°124.0°
C28C26C15C667.5°90.0°
C28C26H24H25119.6°120.0°
C26C28N33H3025.4°26.6°
C27C25C22H23117.2°120.0°
C27C25C22C20176.2°NaN°
C27C25C22H556.0°60.0°
C27C25C22H663.6°60.0°
C27C25C23H756.2°60.0°
C27C25C23H863.3°60.0°
C25C27H11H12119.9°119.9°
C25C27N32H27180.0°56.1°
C25C27N32H2860.0°180.0°
C28N33C19H30180.0°179.9°
C28N33C19C24177.0°180.0°
N33C28C17H26118.1°120.0°
N33C28C17C10130.6°116.0°
C28N33C19O340.5°0.0°
N33C28C26H2465.7°175.0°
N33C28C26H2554.0°55.0°
N33C19C24O34177.6°180.0°
N33C19C24C20128.9°60.0°
C19N33C28C1777.8°86.6°
N33C19C24H913.9°60.0°
C19N33C28H2639.8°33.3°
C19C24C20H9115.3°120.0°
C19C24C20C22177.8°180.0°
C19C24C20H161.6°60.0°
C19C24C20H257.3°60.0°
C19C24C21H364.3°60.0°
C19C24C21H455.1°60.0°
C24C19N33H303.0°0.1°
C24C20C22C2553.5°60.0°
C20C24C19O3448.7°120.0°
C24C20C22H1120.6°120.0°
C24C20C22H2120.6°120.0°
C24C20H1H2118.3°120.0°
C20C24C21H3170.1°180.0°
C20C24C21H470.5°60.0°
C24C20C22H5173.7°60.0°
C24C20C22H666.7°180.0°
C2C1C3H13180.0°180.0°
C2C1C3C60.1°0.1°
C2C1C3H15179.9°180.0°
C1C2C5H17179.3°180.0°
C25C22C20H5120.2°120.0°
C25C22C20H6120.2°120.0°
C25C22C20H1174.1°60.1°
C25C22C20H267.0°180.0°
C25C22H5H6119.4°120.0°
C22C25C23H7179.0°180.0°
C22C25C23H861.5°60.0°
C22C25C27H1161.0°175.0°
C22C25C27H1258.9°55.1°
C28C17C10C14178.3°180.0°
C28C17C10H221.7°0.0°
C17C28C26H2464.3°55.0°
C17C28C26H25175.9°65.0°
C17C28N33H30102.2°93.4°
C17C10C14H22180.0°180.0°
C17C10C14C13178.1°180.0°
C10C17C28H2612.5°4.0°
C15C6C3C11.3°0.1°
C15C6C3H18180.0°179.9°
C15C6C3H15178.7°180.0°
C6C15C5H17178.1°180.0°
C6C15C26H24172.4°150.0°
C6C15C26H2552.6°29.9°
O34C19C24H9163.7°120.0°
O34C19N33H30179.5°180.0°
C22C20H1H2118.3°120.0°
C20C22H5H6119.4°120.0°
C22C20C24H966.9°60.0°
C20C22C25H2359.0°60.0°
C10C14C13C9163.6°179.7°
C10C14C13C423.9°0.0°
C10C14C8H20176.6°180.0°
C14C13C9C4172.4°179.7°
C14C13C9C12174.2°179.8°
C14C13C4C7174.4°179.7°
C14C13C4H165.5°0.4°
C13C14C8H203.7°0.1°
C14C13C9H215.8°0.3°
C13C14C10H221.9°0.0°
C1C3C6H15180.0°179.9°
C3C1C2H14179.8°180.0°
C1C3C6H18178.7°180.0°
C6C3C1H13179.9°180.0°
C13C9C12H21180.0°179.9°
C13C9C12C18178.9°180.0°
C13C9C12C160.2°0.1°
C9C13C4C72.0°0.0°
C9C13C4H16177.9°180.0°
C12C9C13C41.7°0.1°
C9C12C18O352.2°0.0°
C9C12C18C16178.9°179.9°
C9C12C18N30179.7°179.9°
C9C12C16C71.9°0.1°
C9C12C16N31179.8°179.9°
C13C4C7H16180.0°179.9°
C13C4C7C160.4°0.0°
C13C4C7H19179.6°179.9°
C4C13C9H21178.3°180.0°
O35C18C12N30178.0°180.0°
O35C18C12C16176.6°180.0°
O35C18N30N31177.1°180.0°
C18C12C16C7179.0°180.0°
C18C12C16N311.1°0.0°
C12C18N30N311.1°0.0°
C18C12C9H211.1°0.1°
C12C18O35H29177.9°90.1°
C12C16C7C41.6°0.0°
C16C12C18N301.4°0.0°
C12C16C7N31177.3°180.0°
C12C16N31N300.5°0.0°
C12C16C7H19178.4°179.9°
C16C12C9H21179.8°180.0°
C12C16N31H31179.5°180.0°
C4C7C16H19180.0°179.9°
C4C7C16N31178.9°180.0°
C18N30N31C160.3°0.0°
C18N30N31H31179.7°180.0°
N30C18O35H290.0°89.9°
C7C16N31N30178.1°180.0°
C16C7C4H16179.6°179.9°
C7C16N31H311.9°0.0°
C16N31N30H31180.0°180.0°
N31C16C7H191.1°0.0°
H1C20C22H565.7°180.0°
H1C20C22H653.9°59.9°
H1C20C24H953.7°180.0°
H2C20C22H553.2°60.0°
H2C20C22H6172.7°60.0°
H2C20C24H9172.5°60.0°
H3C21C23H764.8°60.0°
H3C21C23H854.7°60.0°
H3C21C24H953.4°60.0°
H4C21C23H754.5°60.0°
H4C21C23H8174.0°180.0°
H4C21C24H9172.8°180.0°
H5C22C25H2361.2°180.0°
H6C22C25H23179.2°60.0°
H7C23C25H2362.4°60.0°
H8C23C25H23178.2°180.0°
H10C11C8H201.5°0.1°
H11C27C25H2356.1°65.0°
H11C27N32H2760.0°63.9°
H11C27N32H2860.0°60.1°
H12C27C25H23176.0°175.0°
H12C27N32H2760.0°176.1°
H12C27N32H28180.0°60.0°
H13C1C2H140.3°0.0°
H13C1C3H150.0°0.1°
H14C2C5H170.6°0.0°
H15C3C6H181.2°0.1°
H16C4C7H190.4°0.1°
H24C26C28H26178.8°65.0°
H25C26C28H2661.4°175.0°
H26C28N33H30140.2°146.6°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon