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5S9

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
NAJCAEdoub1.31Å1.34ÅAromatic
NAJNAQsing1.28Å1.24ÅAromatic
CAANAQsing1.46Å1.48Å
CAECAFsing1.40Å1.33ÅAromatic
NAQCAPsing1.37Å1.34ÅAromatic
CAFCAPdoub1.38Å1.33ÅAromatic
CAPCALsing1.47Å1.36Å
OABCALdoub1.22Å1.23Å
CALNAKsing1.35Å1.36Å
NAKCAOsing1.40Å1.37Å
CAHCAOdoub1.39Å1.40ÅAromatic
CAHCAGsing1.38Å1.39ÅAromatic
CAOCANsing1.39Å1.40ÅAromatic
CAGCAMdoub1.38Å1.39ÅAromatic
CANFADsing1.35Å1.34Å
CANCAIdoub1.38Å1.39ÅAromatic
CAMCAIsing1.39Å1.39ÅAromatic
CAMFACsing1.35Å1.40Å
CAIH1sing1.08Å1.08Å
CAGH2sing1.08Å1.08Å
CAHH3sing1.08Å1.08Å
NAKH4sing0.97Å1.00Å
CAFH5sing1.08Å1.08Å
CAEH6sing1.08Å1.08Å
CAAH7sing1.09Å1.10Å
CAAH8sing1.09Å1.10Å
CAAH9sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CAENAJNAQ109.0°110.9°
NAJCAECAF107.9°107.9°
NAJCAEH6126.0°126.0°
NAJNAQCAA119.7°125.2°
NAJNAQCAP109.7°109.6°
CAANAQCAP130.6°125.2°
NAQCAAH7109.5°109.5°
NAQCAAH8109.5°109.5°
NAQCAAH9109.5°109.5°
CAECAFCAP106.0°105.4°
CAECAFH5127.0°127.3°
CAFCAEH6126.0°126.1°
NAQCAPCAF107.4°106.3°
NAQCAPCAL127.4°126.8°
CAFCAPCAL125.2°126.9°
CAPCAFH5127.0°127.4°
CAPCALOAB120.8°120.0°
CAPCALNAK116.0°120.0°
OABCALNAK123.1°120.0°
CALNAKCAO121.6°120.0°
CALNAKH4119.2°120.0°
NAKCAOCAH124.7°120.1°
NAKCAOCAN116.6°120.0°
CAONAKH4119.2°120.0°
CAOCAHCAG120.7°120.0°
CAHCAOCAN118.7°119.9°
CAOCAHH3119.7°120.0°
CAHCAGCAM120.0°120.1°
CAHCAGH2120.0°120.0°
CAGCAHH3119.6°120.0°
CAOCANFAD120.9°120.1°
CAOCANCAI120.5°119.9°
CAGCAMCAI119.6°120.1°
CAGCAMFAC120.6°120.0°
CAMCAGH2120.0°120.0°
FADCANCAI118.6°120.1°
CANCAICAM120.4°120.0°
CANCAIH1119.8°120.0°
CAICAMFAC119.7°119.9°
CAMCAIH1119.8°120.0°
H7CAAH8109.5°109.5°
H7CAAH9109.5°109.4°
H8CAAH9109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CAENAJNAQCAA179.5°180.0°
NAJCAECAFH6180.0°179.9°
CAENAJNAQCAP0.5°0.4°
NAJCAECAFCAP0.3°0.0°
NAJCAECAFH5179.7°180.0°
NAJNAQCAACAP178.8°179.5°
NAQNAJCAECAF0.1°0.3°
NAJNAQCAPCAF0.7°0.4°
NAJNAQCAPCAL179.5°179.9°
NAQNAJCAEH6179.9°179.8°
NAJNAQCAAH70.0°97.0°
NAJNAQCAAH8120.0°143.0°
NAJNAQCAAH9120.0°23.0°
CAANAQCAPCAF179.6°180.0°
CAANAQCAPCAL1.6°0.3°
NAQCAAH7H8120.0°120.0°
NAQCAAH7H9120.0°120.0°
NAQCAAH8H9120.0°120.0°
CAECAFCAPNAQ0.6°0.2°
CAECAFCAPH5180.0°179.9°
CAECAFCAPCAL179.4°179.9°
NAQCAPCAFCAL178.8°179.7°
NAQCAPCALOAB13.1°173.0°
NAQCAPCALNAK168.3°6.9°
NAQCAPCAFH5179.4°179.7°
CAPNAQCAAH7178.8°83.4°
CAPNAQCAAH858.8°36.6°
CAPNAQCAAH961.2°156.6°
CAFCAPCALOAB165.5°7.3°
CAFCAPCALNAK13.1°172.7°
CAPCAFCAEH6179.7°180.0°
CAPCALOABNAK178.5°180.0°
CAPCALNAKCAO178.0°177.4°
CAPCALNAKH42.0°2.7°
CALCAPCAFH50.6°0.0°
OABCALNAKCAO0.6°2.6°
OABCALNAKH4179.4°177.3°
CALNAKCAOH4180.0°179.9°
CALNAKCAOCAH36.0°28.5°
CALNAKCAOCAN145.8°151.0°
NAKCAOCAHCAN178.2°179.5°
NAKCAOCAHCAG179.5°180.0°
NAKCAOCANFAD1.0°0.3°
NAKCAOCANCAI179.4°180.0°
NAKCAOCAHH30.5°0.5°
CAOCAHCAGH3180.0°179.6°
CAOCAHCAGCAM0.8°0.2°
CAHCAOCANFAD179.3°179.8°
CAHCAOCANCAI1.0°0.5°
CAOCAHCAGH2179.1°179.8°
CAHCAONAKH4144.0°151.4°
CAGCAHCAOCAN1.3°0.5°
CAHCAGCAMH2180.0°180.0°
CAHCAGCAMCAI0.2°0.0°
CAHCAGCAMFAC179.6°180.0°
CAOCANFADCAI179.6°179.7°
CAOCANCAICAM0.4°0.3°
CAOCANCAIH1179.6°179.8°
CANCAOCAHH3178.7°179.9°
CANCAONAKH434.2°29.1°
CAGCAMCAICAN0.0°0.0°
CAGCAMCAIFAC179.8°180.0°
CAGCAMCAIH1180.0°180.0°
CAMCAGCAHH3179.1°179.8°
FADCANCAICAM179.9°180.0°
FADCANCAIH10.1°0.1°
CANCAICAMH1180.0°179.9°
CANCAICAMFAC179.9°179.9°
CAICAMCAGH2179.8°180.0°
FACCAMCAIH10.2°0.0°
FACCAMCAGH20.4°0.0°
H2CAGCAHH30.9°0.2°
H5CAFCAEH60.3°0.1°
H7CAAH8H9120.0°120.0°

248636

PDB entries from 2026-02-04

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