Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5S6

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C31C7sing1.51Å1.47Å
C7O6sing1.34Å1.36ÅAromatic
C7C4doub1.35Å1.37ÅAromatic
O6N2sing1.21Å1.39ÅAromatic
O29C27sing1.43Å1.41Å
C4C1sing1.42Å1.42ÅAromatic
N2C1doub1.31Å1.34ÅAromatic
C27C9sing1.47Å1.45Å
C1C3sing1.48Å1.43Å
C24C20doub1.38Å1.37ÅAromatic
C24C19sing1.40Å1.37ÅAromatic
C9C8trip1.17Å1.20Å
C20C18sing1.38Å1.38ÅAromatic
C8C19sing1.43Å1.41Å
C3N5sing1.35Å1.37Å
C3O17doub1.22Å1.22Å
C19C23doub1.39Å1.38ÅAromatic
N5C16sing1.46Å1.45Å
C18C16sing1.51Å1.50Å
C18C21doub1.38Å1.38ÅAromatic
C16C28sing1.53Å1.52Å
C23C21sing1.38Å1.38ÅAromatic
C28N22sing1.47Å1.48Å
C30C15sing1.51Å1.49Å
C26N22sing1.47Å1.48Å
C26C12sing1.51Å1.49Å
C15C12doub1.38Å1.39ÅAromatic
C15C11sing1.38Å1.38ÅAromatic
C12C13sing1.38Å1.38ÅAromatic
C11C10doub1.39Å1.39ÅAromatic
C13C14doub1.38Å1.38ÅAromatic
C10C14sing1.39Å1.39ÅAromatic
C10O25sing1.36Å1.39Å
C14C32sing1.51Å1.49Å
C33O25sing1.43Å1.42Å
C23H1sing1.08Å1.08Å
C24H2sing1.08Å1.08Å
C21H3sing1.08Å1.08Å
C20H4sing1.08Å1.08Å
C13H5sing1.08Å1.08Å
C11H6sing1.08Å1.08Å
C4H7sing1.08Å1.08Å
C32H8sing1.09Å1.10Å
C32H9sing1.09Å1.10Å
C32H10sing1.09Å1.10Å
C30H11sing1.09Å1.10Å
C30H12sing1.09Å1.10Å
C30H13sing1.09Å1.10Å
C31H14sing1.09Å1.10Å
C31H15sing1.09Å1.10Å
C31H16sing1.09Å1.10Å
C33H17sing1.09Å1.10Å
C33H18sing1.09Å1.10Å
C33H19sing1.09Å1.10Å
C27H20sing1.09Å1.10Å
C27H21sing1.09Å1.10Å
C26H22sing1.09Å1.10Å
C26H23sing1.09Å1.10Å
C28H24sing1.09Å1.10Å
C28H25sing1.09Å1.10Å
C16H26sing1.09Å1.10Å
N5H27sing0.97Å1.00Å
N22H28sing1.01Å1.00Å
O29H30sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C31C7O6117.2°126.7°
C31C7C4134.0°126.7°
C7C31H14109.5°109.5°
C7C31H15109.5°109.5°
C7C31H16109.5°109.5°
O6C7C4108.8°106.6°
C7O6N2109.9°111.9°
C7C4C1104.5°103.9°
C7C4H7127.8°128.0°
O6N2C1105.5°111.4°
O29C27C9106.8°109.5°
O29C27H20110.1°109.5°
O29C27H21110.1°109.5°
C27O29H30109.5°114.0°
C4C1N2111.4°106.1°
C4C1C3128.0°126.9°
C1C4H7127.8°128.1°
N2C1C3120.6°127.0°
C27C9C8177.4°180.0°
C9C27H20110.1°109.5°
C9C27H21110.2°109.5°
C1C3N5111.5°120.0°
C1C3O17122.0°120.1°
C20C24C19118.9°119.8°
C24C20C18121.1°120.1°
C20C24H2120.6°120.1°
C24C20H4119.5°119.9°
C24C19C8116.9°120.1°
C24C19C23121.4°119.7°
C19C24H2120.5°120.0°
C9C8C19176.4°180.0°
C20C18C16119.4°119.8°
C20C18C21119.3°120.3°
C18C20H4119.5°120.0°
C8C19C23121.7°120.2°
N5C3O17126.5°119.9°
C3N5C16122.8°120.0°
C3N5H27118.6°120.0°
C19C23C21119.0°119.9°
C19C23H1120.5°120.1°
N5C16C18113.3°109.5°
N5C16C28110.1°109.5°
N5C16H26106.5°109.5°
C16N5H27118.6°120.0°
C16C18C21121.3°119.9°
C18C16C28114.5°109.5°
C18C16H26105.9°109.4°
C18C21C23120.4°120.1°
C18C21H3119.8°119.9°
C16C28N22105.2°109.5°
C16C28H24110.5°109.5°
C16C28H25110.5°109.5°
C28C16H26105.7°109.4°
C21C23H1120.5°120.1°
C23C21H3119.8°120.0°
C28N22C26113.2°111.0°
N22C28H24110.5°109.5°
N22C28H25110.5°109.5°
C28N22H28108.5°111.0°
C30C15C12123.8°120.0°
C30C15C11117.1°120.0°
C15C30H11109.5°109.4°
C15C30H12109.5°109.5°
C15C30H13109.5°109.5°
N22C26C12108.6°109.5°
N22C26H22109.7°109.5°
N22C26H23109.6°109.5°
C26N22H28108.6°111.0°
C26C12C15122.3°119.9°
C26C12C13117.3°120.0°
C12C26H22109.7°109.4°
C12C26H23109.7°109.5°
C12C15C11119.1°120.1°
C15C12C13120.4°120.1°
C15C11C10120.5°119.9°
C15C11H6119.8°120.0°
C12C13C14120.7°120.1°
C12C13H5119.7°119.9°
C11C10C14120.5°119.9°
C11C10O25118.0°120.0°
C10C11H6119.8°120.1°
C13C14C10118.8°119.9°
C13C14C32118.1°120.1°
C14C13H5119.7°120.0°
C14C10O25121.5°120.1°
C10C14C32123.1°120.0°
C10O25C33105.3°117.0°
C14C32H8109.5°109.5°
C14C32H9109.5°109.5°
C14C32H10109.5°109.5°
O25C33H17109.5°109.6°
O25C33H18109.5°109.5°
O25C33H19109.5°109.5°
H8C32H9109.5°109.5°
H8C32H10109.4°109.5°
H9C32H10109.5°109.5°
H11C30H12109.5°109.5°
H11C30H13109.5°109.5°
H12C30H13109.4°109.5°
H14C31H15109.4°109.5°
H14C31H16109.5°109.5°
H15C31H16109.5°109.4°
H17C33H18109.5°109.4°
H17C33H19109.4°109.5°
H18C33H19109.5°109.4°
H20C27H21109.5°109.5°
H22C26H23109.5°109.5°
H24C28H25109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C31C7O6C4179.6°179.8°
C31C7O6N2179.2°180.0°
C31C7C4C1179.4°179.8°
C31C7C4H70.6°0.1°
C7C31H14H15120.0°120.0°
C7C31H14H16120.0°120.0°
C7C31H15H16120.0°120.0°
O6C7C4C10.1°0.0°
C7O6N2C10.5°0.4°
O6C7C4H7179.9°179.7°
O6C7C31H140.0°0.1°
O6C7C31H15120.0°120.1°
O6C7C31H16120.0°120.0°
C4C7O6N20.4°0.2°
C7C4C1H7180.0°179.7°
C7C4C1N20.2°0.2°
C7C4C1C3179.3°179.7°
C4C7C31H14179.5°179.7°
C4C7C31H1559.5°59.7°
C4C7C31H1660.5°60.3°
O6N2C1C40.4°0.4°
O6N2C1C3179.6°179.6°
O29C27C9H20119.6°120.0°
O29C27C9H21119.6°120.0°
O29C27C9C826.4°139.2°
O29C27H20H21121.2°120.0°
C4C1N2C3179.2°179.9°
C4C1C3N5144.9°180.0°
C4C1C3O1734.5°0.0°
N2C1C3N534.2°0.1°
N2C1C3O17146.4°180.0°
N2C1C4H7179.8°180.0°
C27C9C8C1918.9°169.4°
C9C27H20H21121.3°120.0°
C9C27O29H30180.0°180.0°
C1C3N5O17179.4°180.0°
C1C3N5C16179.5°175.0°
C3C1C4H70.7°0.0°
C1C3N5H270.5°5.0°
C20C24C19H2180.0°179.2°
C24C20C18H4180.0°179.2°
C20C24C19C8179.2°179.5°
C20C24C19C230.0°0.5°
C24C20C18C16178.4°180.0°
C24C20C18C210.5°0.4°
C24C19C8C932.3°29.8°
C19C24C20C180.6°0.8°
C24C19C8C23179.2°180.0°
C24C19C23C210.5°0.0°
C24C19C23H1179.5°179.7°
C19C24C20H4179.4°180.0°
C9C8C19C23146.9°150.2°
C8C9C27H20146.0°19.2°
C8C9C27H2193.2°100.8°
C20C18C16N513.0°41.4°
C20C18C16C21178.9°179.6°
C20C18C16C28114.4°78.7°
C20C18C21C230.1°0.1°
C18C20C24H2179.4°179.9°
C20C18C21H3179.9°180.0°
C20C18C16H26129.5°161.4°
C8C19C23C21178.6°180.0°
C8C19C23H11.4°0.3°
C8C19C24H20.8°0.3°
C3N5C16H27180.0°180.0°
C3N5C16C1891.7°85.2°
C3N5C16C28138.6°154.7°
C3N5C16H2624.4°34.7°
O17C3N5C161.1°5.0°
O17C3N5H27179.0°175.0°
C19C23C21C180.6°0.3°
C19C23C21H1180.0°179.7°
C23C19C24H2179.9°179.7°
C19C23C21H3179.4°179.8°
N5C16C18C28127.5°120.1°
N5C16C18H26116.4°120.0°
N5C16C18C21165.8°138.2°
N5C16C28H26114.7°120.0°
N5C16C28N2291.5°55.0°
N5C16C28H24149.1°175.0°
N5C16C28H2527.8°65.0°
C18C16C28H26116.2°120.0°
C16C18C21C23179.0°179.5°
C18C16C28N22139.4°175.0°
C16C18C21H31.1°0.4°
C16C18C20H41.7°0.7°
C18C16C28H2420.0°65.0°
C18C16C28H25101.3°55.0°
C18C16N5H2788.3°94.7°
C21C18C16C2866.7°101.7°
C18C21C23H3180.0°179.9°
C18C21C23H1179.4°180.0°
C21C18C20H4179.5°179.7°
C21C18C16H2649.4°18.2°
C16C28N22H24119.3°120.0°
C16C28N22H25119.3°120.0°
C16C28N22C26106.2°180.0°
C16C28H24H25121.9°120.0°
C28C16N5H2741.4°25.3°
C16C28N22H2814.3°56.1°
C28N22C26H28120.6°123.9°
C28N22C26C12171.2°180.0°
C28N22C26H2268.9°60.0°
C28N22C26H2351.3°60.0°
N22C28H24H25122.0°120.0°
N22C28C16H2623.2°65.0°
C30C15C12C260.0°0.1°
C30C15C12C11179.5°180.0°
C30C15C12C13179.8°180.0°
C30C15C11C10179.5°179.8°
C30C15C11H60.5°0.2°
C15C30H11H12120.0°120.0°
C15C30H11H13120.0°120.0°
C15C30H12H13120.0°120.0°
N22C26C12H22119.8°120.0°
N22C26C12H23119.9°120.0°
N22C26C12C1591.8°80.0°
N22C26C12C1388.4°100.0°
N22C26H22H23120.3°120.0°
C26N22C28H24134.4°60.0°
C26N22C28H2513.1°60.0°
C26C12C15C13179.8°179.9°
C26C12C15C11179.4°179.9°
C26C12C13C14179.8°180.0°
C26C12C13H50.2°0.4°
C12C26H22H23120.4°120.0°
C12C26N22H2850.7°56.0°
C12C15C11C101.0°0.2°
C15C12C13C140.1°0.1°
C15C12C13H5180.0°179.7°
C12C15C11H6179.0°179.8°
C12C15C30H1189.7°90.0°
C12C15C30H12150.3°150.0°
C12C15C30H1330.3°30.0°
C15C12C26H22148.4°160.0°
C15C12C26H2328.1°40.1°
C11C15C12C130.7°0.0°
C15C11C10H6180.0°179.5°
C15C11C10C140.5°0.5°
C15C11C10O25179.7°180.0°
C11C15C30H1189.8°90.0°
C11C15C30H1230.3°30.0°
C11C15C30H13150.2°150.0°
C12C13C14H5180.0°179.7°
C12C13C14C100.5°0.3°
C12C13C14C32179.8°179.7°
C13C12C26H2231.5°20.0°
C13C12C26H23151.7°140.0°
C11C10C14C130.2°0.5°
C11C10C14O25179.1°179.5°
C11C10C14C32179.9°179.5°
C11C10O25C3372.7°0.1°
C13C14C10C32179.7°180.0°
C13C14C10O25178.9°179.9°
C13C14C32H890.1°90.0°
C13C14C32H9149.9°150.0°
C13C14C32H1029.9°30.0°
C14C10O25C33108.2°179.5°
C10C14C13H5179.5°180.0°
C14C10C11H6179.5°180.0°
C10C14C32H890.2°90.0°
C10C14C32H929.8°30.0°
C10C14C32H10149.8°150.0°
O25C10C14C320.8°0.1°
O25C10C11H60.3°0.4°
C10O25C33H17180.0°60.0°
C10O25C33H1860.0°180.0°
C10O25C33H1960.0°60.1°
C32C14C13H50.2°0.0°
C14C32H8H9120.0°120.0°
C14C32H8H10120.0°120.0°
C14C32H9H10120.0°120.0°
O25C33H17H18120.0°120.0°
O25C33H17H19120.0°120.1°
O25C33H18H19120.0°120.0°
H1C23C21H30.6°0.0°
H2C24C20H40.6°0.8°
H8C32H9H10120.0°120.0°
H11C30H12H13120.0°120.0°
H14C31H15H16120.0°120.0°
H17C33H18H19120.0°120.0°
H20C27O29H3060.5°60.0°
H21C27O29H3060.4°60.0°
H22C26N22H28170.5°63.9°
H23C26N22H2869.2°176.0°
H24C28C16H2696.1°55.0°
H24C28N22H28105.0°176.1°
H25C28C16H26142.5°175.0°
H25C28N22H28133.6°64.0°
H26C16N5H27155.6°145.3°

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon