5RM
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O19 | C4 | doub | 1.21Å | 1.23Å | |
| C4 | O5 | sing | 1.34Å | 1.43Å | |
| C4 | N3 | sing | 1.34Å | 1.34Å | |
| O5 | C1 | sing | 1.46Å | 1.42Å | |
| N3 | C2 | sing | 1.47Å | 1.45Å | |
| C2 | C1 | sing | 1.54Å | 1.54Å | |
| C2 | H2 | sing | 1.09Å | 1.10Å | |
| C1 | C18 | sing | 1.53Å | 1.53Å | |
| C1 | C6 | sing | 1.51Å | 1.51Å | |
| C18 | H181 | sing | 1.09Å | 1.10Å | |
| C18 | H182 | sing | 1.09Å | 1.10Å | |
| C18 | H183 | sing | 1.09Å | 1.10Å | |
| C6 | C7 | doub | 1.38Å | 1.40Å | Aromatic |
| C6 | C17 | sing | 1.38Å | 1.40Å | Aromatic |
| C7 | C8 | sing | 1.38Å | 1.39Å | Aromatic |
| C7 | H7 | sing | 1.08Å | 1.08Å | |
| C8 | C9 | doub | 1.38Å | 1.40Å | Aromatic |
| C8 | H8 | sing | 1.08Å | 1.08Å | |
| C9 | O10 | sing | 1.36Å | 1.37Å | |
| C9 | C12 | sing | 1.39Å | 1.40Å | Aromatic |
| O10 | C11 | sing | 1.43Å | 1.43Å | |
| C11 | H111 | sing | 1.09Å | 1.10Å | |
| C11 | H112 | sing | 1.09Å | 1.10Å | |
| C11 | H113 | sing | 1.09Å | 1.10Å | |
| C12 | C17 | doub | 1.39Å | 1.40Å | Aromatic |
| C12 | O13 | sing | 1.36Å | 1.39Å | |
| C17 | H17 | sing | 1.08Å | 1.08Å | |
| O13 | C14 | sing | 1.43Å | 1.43Å | |
| C14 | C15 | sing | 1.53Å | 1.53Å | |
| C14 | H141 | sing | 1.09Å | 1.10Å | |
| C14 | H142 | sing | 1.09Å | 1.10Å | |
| C15 | C16 | sing | 1.53Å | 1.51Å | |
| C15 | H151 | sing | 1.09Å | 1.10Å | |
| C15 | H152 | sing | 1.09Å | 1.10Å | |
| C16 | H161 | sing | 1.09Å | 1.10Å | |
| C16 | H162 | sing | 1.09Å | 1.10Å | |
| C16 | H163 | sing | 1.09Å | 1.10Å | |
| N3 | H18 | sing | 0.97Å | 1.00Å | |
| C2 | H19 | sing | 1.09Å | 1.10Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O19 | C4 | O5 | 119.3° | 123.1° |
| O19 | C4 | N3 | 127.9° | 123.1° |
| O5 | C4 | N3 | 107.9° | 113.8° |
| C4 | O5 | C1 | 109.7° | 109.5° |
| C4 | N3 | C2 | 112.6° | 108.9° |
| C4 | N3 | H18 | 123.7° | 125.5° |
| O5 | C1 | C2 | 104.7° | 104.0° |
| O5 | C1 | C18 | 105.8° | 110.5° |
| O5 | C1 | C6 | 111.1° | 110.5° |
| N3 | C2 | C1 | 103.2° | 103.8° |
| N3 | C2 | H2 | 111.6° | 110.5° |
| C2 | N3 | H18 | 123.7° | 125.6° |
| N3 | C2 | H19 | 112.9° | 110.6° |
| C1 | C2 | H2 | 111.6° | 110.4° |
| C2 | C1 | C18 | 113.0° | 110.4° |
| C2 | C1 | C6 | 112.6° | 110.6° |
| C1 | C2 | H19 | 112.9° | 110.8° |
| H2 | C2 | H19 | 104.8° | 110.6° |
| C18 | C1 | C6 | 109.5° | 110.5° |
| C1 | C18 | H181 | 109.5° | 109.4° |
| C1 | C18 | H182 | 109.5° | 109.5° |
| C1 | C18 | H183 | 109.5° | 109.5° |
| C1 | C6 | C7 | 120.4° | 119.9° |
| C1 | C6 | C17 | 120.9° | 119.9° |
| H181 | C18 | H182 | 109.4° | 109.5° |
| H181 | C18 | H183 | 109.5° | 109.5° |
| H182 | C18 | H183 | 109.5° | 109.5° |
| C7 | C6 | C17 | 118.6° | 120.1° |
| C6 | C7 | C8 | 120.8° | 120.2° |
| C6 | C7 | H7 | 119.6° | 119.9° |
| C6 | C17 | C12 | 121.5° | 120.0° |
| C6 | C17 | H17 | 119.2° | 120.0° |
| C8 | C7 | H7 | 119.6° | 119.9° |
| C7 | C8 | C9 | 119.9° | 120.0° |
| C7 | C8 | H8 | 120.0° | 120.0° |
| C9 | C8 | H8 | 120.0° | 120.0° |
| C8 | C9 | O10 | 122.0° | 120.1° |
| C8 | C9 | C12 | 120.1° | 119.9° |
| O10 | C9 | C12 | 118.0° | 120.0° |
| C9 | O10 | C11 | 124.6° | 117.0° |
| C9 | C12 | C17 | 119.1° | 119.8° |
| C9 | C12 | O13 | 118.8° | 120.1° |
| O10 | C11 | H111 | 109.5° | 109.4° |
| O10 | C11 | H112 | 109.5° | 109.5° |
| O10 | C11 | H113 | 109.5° | 109.5° |
| H111 | C11 | H112 | 109.5° | 109.5° |
| H111 | C11 | H113 | 109.5° | 109.6° |
| H112 | C11 | H113 | 109.5° | 109.4° |
| C17 | C12 | O13 | 122.1° | 120.1° |
| C12 | C17 | H17 | 119.3° | 120.0° |
| C12 | O13 | C14 | 123.7° | 117.0° |
| O13 | C14 | C15 | 108.9° | 109.5° |
| O13 | C14 | H141 | 109.7° | 109.5° |
| O13 | C14 | H142 | 109.8° | 109.4° |
| C15 | C14 | H141 | 109.6° | 109.5° |
| C15 | C14 | H142 | 109.8° | 109.5° |
| C14 | C15 | C16 | 108.9° | 109.5° |
| C14 | C15 | H151 | 109.7° | 109.5° |
| C14 | C15 | H152 | 109.8° | 109.5° |
| H141 | C14 | H142 | 109.1° | 109.5° |
| C16 | C15 | H151 | 109.7° | 109.5° |
| C16 | C15 | H152 | 109.8° | 109.5° |
| C15 | C16 | H161 | 109.5° | 109.5° |
| C15 | C16 | H162 | 109.4° | 109.5° |
| C15 | C16 | H163 | 109.5° | 109.5° |
| H151 | C15 | H152 | 109.0° | 109.5° |
| H161 | C16 | H162 | 109.5° | 109.5° |
| H161 | C16 | H163 | 109.5° | 109.5° |
| H162 | C16 | H163 | 109.5° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O19 | C4 | O5 | N3 | 157.1° | 179.7° |
| O19 | C4 | O5 | C1 | 169.0° | 180.0° |
| O19 | C4 | N3 | C2 | 158.6° | 180.0° |
| O19 | C4 | N3 | H18 | 21.3° | 0.0° |
| O5 | C4 | N3 | C2 | 4.1° | 0.3° |
| C4 | O5 | C1 | C2 | 14.1° | 0.1° |
| C4 | O5 | C1 | C18 | 133.7° | 118.7° |
| C4 | O5 | C1 | C6 | 107.6° | 118.7° |
| O5 | C4 | N3 | H18 | 175.9° | 179.7° |
| N3 | C4 | O5 | C1 | 11.9° | 0.2° |
| C4 | N3 | C2 | H18 | 180.0° | 180.0° |
| C4 | N3 | C2 | C1 | 4.4° | 0.2° |
| C4 | N3 | C2 | H2 | 115.5° | 118.6° |
| C4 | N3 | C2 | H19 | 126.7° | 118.6° |
| O5 | C1 | C2 | N3 | 11.1° | 0.0° |
| O5 | C1 | C2 | C18 | 114.6° | 118.6° |
| O5 | C1 | C2 | C6 | 120.7° | 118.7° |
| O5 | C1 | C2 | H2 | 108.9° | 118.5° |
| O5 | C1 | C18 | C6 | 119.7° | 122.7° |
| O5 | C1 | C18 | H181 | 46.1° | 59.3° |
| O5 | C1 | C18 | H182 | 73.9° | 179.3° |
| O5 | C1 | C18 | H183 | 166.1° | 60.7° |
| O5 | C1 | C6 | C7 | 177.4° | 148.6° |
| O5 | C1 | C6 | C17 | 4.6° | 31.2° |
| O5 | C1 | C2 | H19 | 133.4° | 118.6° |
| N3 | C2 | C1 | H2 | 120.0° | 118.5° |
| N3 | C2 | C1 | H19 | 122.3° | 118.7° |
| N3 | C2 | H2 | H19 | 122.5° | 122.8° |
| N3 | C2 | C1 | C18 | 125.7° | 118.6° |
| N3 | C2 | C1 | C6 | 109.6° | 118.7° |
| C1 | C2 | H2 | H19 | 122.5° | 122.9° |
| C2 | C1 | C18 | C6 | 126.3° | 122.8° |
| C2 | C1 | C18 | H181 | 160.0° | 55.2° |
| C2 | C1 | C18 | H182 | 40.1° | 64.7° |
| C2 | C1 | C18 | H183 | 80.0° | 175.2° |
| C2 | C1 | C6 | C7 | 60.4° | 33.9° |
| C2 | C1 | C6 | C17 | 121.6° | 145.8° |
| C1 | C2 | N3 | H18 | 175.6° | 179.8° |
| H2 | C2 | C1 | C18 | 5.7° | 0.1° |
| H2 | C2 | C1 | C6 | 130.4° | 122.8° |
| H2 | C2 | N3 | H18 | 64.4° | 61.4° |
| C1 | C18 | H181 | H182 | 120.0° | 120.0° |
| C1 | C18 | H181 | H183 | 120.0° | 120.0° |
| C1 | C18 | H182 | H183 | 120.0° | 120.0° |
| C18 | C1 | C6 | C7 | 66.1° | 88.7° |
| C18 | C1 | C6 | C17 | 111.9° | 91.5° |
| C18 | C1 | C2 | H19 | 112.0° | 122.7° |
| C6 | C1 | C18 | H181 | 73.6° | 178.0° |
| C6 | C1 | C18 | H182 | 166.4° | 58.0° |
| C6 | C1 | C18 | H183 | 46.4° | 62.0° |
| C1 | C6 | C7 | C17 | 178.1° | 179.7° |
| C1 | C6 | C7 | C8 | 179.3° | 180.0° |
| C1 | C6 | C7 | H7 | 0.7° | 0.0° |
| C1 | C6 | C17 | C12 | 178.7° | 179.7° |
| C1 | C6 | C17 | H17 | 1.3° | 0.0° |
| C6 | C1 | C2 | H19 | 12.6° | 0.0° |
| H181 | C18 | H182 | H183 | 120.0° | 120.0° |
| C6 | C7 | C8 | H7 | 180.0° | 180.0° |
| C6 | C7 | C8 | C9 | 1.9° | 0.0° |
| C6 | C7 | C8 | H8 | 178.1° | 180.0° |
| C7 | C6 | C17 | C12 | 0.7° | 0.5° |
| C7 | C6 | C17 | H17 | 179.3° | 179.8° |
| C17 | C6 | C7 | C8 | 1.3° | 0.3° |
| C17 | C6 | C7 | H7 | 178.7° | 179.8° |
| C6 | C17 | C12 | C9 | 0.7° | 0.5° |
| C6 | C17 | C12 | H17 | 180.0° | 179.7° |
| C6 | C17 | C12 | O13 | 178.9° | 179.7° |
| C7 | C8 | C9 | H8 | 180.0° | 180.0° |
| C7 | C8 | C9 | O10 | 179.7° | 179.9° |
| C7 | C8 | C9 | C12 | 1.9° | 0.0° |
| H7 | C7 | C8 | C9 | 178.1° | 180.0° |
| H7 | C7 | C8 | H8 | 1.9° | 0.0° |
| C8 | C9 | O10 | C12 | 178.5° | 179.9° |
| C8 | C9 | O10 | C11 | 1.9° | 0.0° |
| C8 | C9 | C12 | C17 | 1.3° | 0.3° |
| C8 | C9 | C12 | O13 | 178.3° | 180.0° |
| H8 | C8 | C9 | O10 | 0.3° | 0.1° |
| H8 | C8 | C9 | C12 | 178.1° | 180.0° |
| C9 | O10 | C11 | H111 | 16.7° | 179.9° |
| C9 | O10 | C11 | H112 | 103.3° | 59.9° |
| C9 | O10 | C11 | H113 | 136.7° | 60.0° |
| O10 | C9 | C12 | C17 | 179.7° | 179.7° |
| O10 | C9 | C12 | O13 | 0.2° | 0.1° |
| C12 | C9 | O10 | C11 | 176.5° | 180.0° |
| C9 | C12 | C17 | O13 | 179.6° | 179.7° |
| C9 | C12 | C17 | H17 | 179.3° | 179.8° |
| C9 | C12 | O13 | C14 | 176.6° | 180.0° |
| O10 | C11 | H111 | H112 | 120.0° | 120.0° |
| O10 | C11 | H111 | H113 | 120.0° | 120.0° |
| O10 | C11 | H112 | H113 | 120.0° | 120.0° |
| H111 | C11 | H112 | H113 | 120.0° | 120.1° |
| C17 | C12 | O13 | C14 | 3.8° | 0.3° |
| O13 | C12 | C17 | H17 | 1.1° | 0.0° |
| C12 | O13 | C14 | C15 | 168.7° | 180.0° |
| C12 | O13 | C14 | H141 | 48.7° | 60.0° |
| C12 | O13 | C14 | H142 | 71.1° | 60.0° |
| O13 | C14 | C15 | H141 | 120.0° | 120.0° |
| O13 | C14 | C15 | H142 | 120.2° | 120.0° |
| O13 | C14 | H141 | H142 | 120.2° | 120.0° |
| O13 | C14 | C15 | C16 | 66.2° | 180.0° |
| O13 | C14 | C15 | H151 | 173.8° | 60.0° |
| O13 | C14 | C15 | H152 | 54.0° | 60.0° |
| C15 | C14 | H141 | H142 | 120.2° | 120.0° |
| C14 | C15 | C16 | H151 | 120.0° | 120.0° |
| C14 | C15 | C16 | H152 | 120.3° | 120.0° |
| C14 | C15 | H151 | H152 | 120.3° | 120.0° |
| C14 | C15 | C16 | H161 | 18.7° | 180.0° |
| C14 | C15 | C16 | H162 | 101.3° | 60.0° |
| C14 | C15 | C16 | H163 | 138.7° | 60.0° |
| H141 | C14 | C15 | C16 | 53.8° | 60.0° |
| H141 | C14 | C15 | H151 | 66.2° | 180.0° |
| H141 | C14 | C15 | H152 | 174.0° | 60.0° |
| H142 | C14 | C15 | C16 | 173.6° | 60.0° |
| H142 | C14 | C15 | H151 | 53.6° | 60.0° |
| H142 | C14 | C15 | H152 | 66.2° | 180.0° |
| C16 | C15 | H151 | H152 | 120.2° | 120.0° |
| C15 | C16 | H161 | H162 | 120.0° | 120.0° |
| C15 | C16 | H161 | H163 | 120.0° | 120.0° |
| C15 | C16 | H162 | H163 | 120.0° | 120.0° |
| H151 | C15 | C16 | H161 | 138.7° | 60.0° |
| H151 | C15 | C16 | H162 | 18.7° | 180.0° |
| H151 | C15 | C16 | H163 | 101.3° | 60.0° |
| H152 | C15 | C16 | H161 | 101.5° | 60.0° |
| H152 | C15 | C16 | H162 | 138.5° | 60.0° |
| H152 | C15 | C16 | H163 | 18.5° | 180.0° |
| H161 | C16 | H162 | H163 | 120.0° | 120.0° |
| H18 | N3 | C2 | H19 | 53.3° | 61.4° |
