5QV
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O5 | N6 | sing | 1.21Å | 1.41Å | Aromatic |
O5 | C4 | sing | 1.34Å | 1.30Å | Aromatic |
N6 | C2 | doub | 1.30Å | 1.35Å | Aromatic |
C4 | C7 | sing | 1.51Å | 1.51Å | |
C4 | C3 | doub | 1.35Å | 1.39Å | Aromatic |
C2 | C1 | sing | 1.51Å | 1.51Å | |
C2 | C3 | sing | 1.41Å | 1.40Å | Aromatic |
C3 | C8 | sing | 1.51Å | 1.52Å | |
F22 | C21 | sing | 1.35Å | 1.34Å | |
C9 | C8 | sing | 1.53Å | 1.53Å | |
C9 | C10 | sing | 1.52Å | 1.53Å | |
C8 | S13 | sing | 1.81Å | 1.80Å | |
C21 | C20 | doub | 1.39Å | 1.39Å | Aromatic |
C21 | C16 | sing | 1.39Å | 1.40Å | Aromatic |
C20 | C19 | sing | 1.38Å | 1.39Å | Aromatic |
C15 | C10 | sing | 1.53Å | 1.53Å | |
C10 | C16 | sing | 1.51Å | 1.53Å | |
C10 | N11 | sing | 1.45Å | 1.47Å | |
C16 | C17 | doub | 1.38Å | 1.40Å | Aromatic |
S13 | C12 | sing | 1.76Å | 1.76Å | |
C19 | F23 | sing | 1.35Å | 1.34Å | |
C19 | C18 | doub | 1.40Å | 1.40Å | Aromatic |
N11 | C12 | doub | 1.28Å | 1.28Å | |
C12 | N14 | sing | 1.38Å | 1.34Å | |
C17 | C18 | sing | 1.39Å | 1.40Å | Aromatic |
C18 | C24 | sing | 1.48Å | 1.49Å | |
C25 | C24 | doub | 1.40Å | 1.40Å | Aromatic |
C25 | N26 | sing | 1.32Å | 1.35Å | Aromatic |
C24 | C29 | sing | 1.40Å | 1.40Å | Aromatic |
N26 | C27 | doub | 1.32Å | 1.35Å | Aromatic |
C29 | N28 | doub | 1.32Å | 1.35Å | Aromatic |
C27 | N28 | sing | 1.32Å | 1.35Å | Aromatic |
N14 | H1 | sing | 0.97Å | 1.00Å | |
N14 | H2 | sing | 0.97Å | 1.00Å | |
C17 | H4 | sing | 1.08Å | 1.08Å | |
C15 | H5 | sing | 1.09Å | 1.10Å | |
C15 | H6 | sing | 1.09Å | 1.10Å | |
C15 | H7 | sing | 1.09Å | 1.10Å | |
C20 | H8 | sing | 1.08Å | 1.08Å | |
C27 | H10 | sing | 1.08Å | 1.08Å | |
C1 | H11 | sing | 1.09Å | 1.10Å | |
C1 | H12 | sing | 1.09Å | 1.10Å | |
C1 | H13 | sing | 1.09Å | 1.10Å | |
C7 | H14 | sing | 1.09Å | 1.10Å | |
C7 | H15 | sing | 1.09Å | 1.10Å | |
C7 | H16 | sing | 1.09Å | 1.10Å | |
C8 | H17 | sing | 1.09Å | 1.10Å | |
C9 | H18 | sing | 1.09Å | 1.10Å | |
C9 | H19 | sing | 1.09Å | 1.10Å | |
C25 | H22 | sing | 1.08Å | 1.08Å | |
C29 | H23 | sing | 1.08Å | 1.08Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N6 | O5 | C4 | 108.7° | 111.6° |
O5 | N6 | C2 | 108.2° | 111.6° |
O5 | C4 | C7 | 124.6° | 126.8° |
O5 | C4 | C3 | 109.3° | 106.5° |
N6 | C2 | C1 | 124.5° | 126.8° |
N6 | C2 | C3 | 106.8° | 106.4° |
C7 | C4 | C3 | 126.1° | 126.8° |
C4 | C7 | H14 | 109.5° | 109.5° |
C4 | C7 | H15 | 109.5° | 109.5° |
C4 | C7 | H16 | 109.4° | 109.5° |
C4 | C3 | C2 | 106.9° | 104.0° |
C4 | C3 | C8 | 125.4° | 128.0° |
C1 | C2 | C3 | 128.7° | 126.8° |
C2 | C1 | H11 | 109.5° | 109.5° |
C2 | C1 | H12 | 109.5° | 109.5° |
C2 | C1 | H13 | 109.5° | 109.5° |
C2 | C3 | C8 | 127.7° | 128.0° |
C3 | C8 | C9 | 112.2° | 109.8° |
C3 | C8 | S13 | 112.1° | 109.8° |
C3 | C8 | H17 | 108.6° | 109.7° |
F22 | C21 | C20 | 117.4° | 119.9° |
F22 | C21 | C16 | 122.1° | 119.9° |
C8 | C9 | C10 | 113.6° | 109.1° |
C9 | C8 | S13 | 109.5° | 107.9° |
C9 | C8 | H17 | 108.4° | 109.8° |
C8 | C9 | H18 | 108.4° | 109.6° |
C8 | C9 | H19 | 108.4° | 109.6° |
C9 | C10 | C15 | 106.0° | 108.9° |
C9 | C10 | C16 | 111.7° | 108.8° |
C9 | C10 | N11 | 112.8° | 112.8° |
C10 | C9 | H18 | 108.4° | 109.3° |
C10 | C9 | H19 | 108.4° | 109.6° |
C8 | S13 | C12 | 107.0° | 99.7° |
S13 | C8 | H17 | 105.7° | 109.8° |
C20 | C21 | C16 | 120.6° | 120.2° |
C21 | C20 | C19 | 119.8° | 120.0° |
C21 | C20 | H8 | 120.1° | 119.9° |
C21 | C16 | C10 | 121.4° | 119.9° |
C21 | C16 | C17 | 119.1° | 120.1° |
C20 | C19 | F23 | 119.5° | 120.0° |
C20 | C19 | C18 | 120.3° | 119.9° |
C19 | C20 | H8 | 120.1° | 120.0° |
C15 | C10 | C16 | 109.6° | 108.8° |
C15 | C10 | N11 | 105.4° | 108.9° |
C10 | C15 | H5 | 109.5° | 109.4° |
C10 | C15 | H6 | 109.5° | 109.5° |
C10 | C15 | H7 | 109.4° | 109.5° |
C16 | C10 | N11 | 111.0° | 108.6° |
C10 | C16 | C17 | 119.6° | 119.9° |
C10 | N11 | C12 | 126.3° | 128.5° |
C16 | C17 | C18 | 120.7° | 119.9° |
C16 | C17 | H4 | 119.7° | 120.0° |
S13 | C12 | N11 | 120.4° | 124.0° |
S13 | C12 | N14 | 118.4° | 118.0° |
F23 | C19 | C18 | 120.3° | 120.0° |
C19 | C18 | C17 | 119.6° | 119.8° |
C19 | C18 | C24 | 121.7° | 120.1° |
N11 | C12 | N14 | 120.0° | 118.0° |
C12 | N14 | H1 | 120.0° | 120.0° |
C12 | N14 | H2 | 120.0° | 120.0° |
C17 | C18 | C24 | 118.7° | 120.1° |
C18 | C17 | H4 | 119.6° | 120.1° |
C18 | C24 | C25 | 120.3° | 120.9° |
C18 | C24 | C29 | 121.2° | 121.0° |
C24 | C25 | N26 | 119.9° | 118.9° |
C25 | C24 | C29 | 118.5° | 118.1° |
C24 | C25 | H22 | 120.0° | 120.5° |
C25 | N26 | C27 | 120.4° | 121.0° |
N26 | C25 | H22 | 120.0° | 120.6° |
C24 | C29 | N28 | 119.6° | 119.0° |
C24 | C29 | H23 | 120.2° | 120.5° |
N26 | C27 | N28 | 120.7° | 122.1° |
N26 | C27 | H10 | 119.7° | 118.9° |
C29 | N28 | C27 | 120.8° | 120.9° |
N28 | C29 | H23 | 120.2° | 120.5° |
N28 | C27 | H10 | 119.6° | 119.0° |
H1 | N14 | H2 | 120.0° | 120.0° |
H5 | C15 | H6 | 109.5° | 109.5° |
H5 | C15 | H7 | 109.5° | 109.4° |
H6 | C15 | H7 | 109.5° | 109.5° |
H11 | C1 | H12 | 109.5° | 109.4° |
H11 | C1 | H13 | 109.5° | 109.4° |
H12 | C1 | H13 | 109.4° | 109.5° |
H14 | C7 | H15 | 109.5° | 109.5° |
H14 | C7 | H16 | 109.5° | 109.4° |
H15 | C7 | H16 | 109.4° | 109.4° |
H18 | C9 | H19 | 109.5° | 109.7° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N6 | O5 | C4 | C7 | 180.0° | 179.7° |
N6 | O5 | C4 | C3 | 0.2° | 0.4° |
O5 | N6 | C2 | C1 | 180.0° | 179.8° |
O5 | N6 | C2 | C3 | 0.1° | 0.5° |
C4 | O5 | N6 | C2 | 0.1° | 0.5° |
O5 | C4 | C7 | C3 | 179.8° | 179.9° |
O5 | C4 | C3 | C2 | 0.2° | 0.1° |
O5 | C4 | C3 | C8 | 179.9° | 180.0° |
O5 | C4 | C7 | H14 | 0.0° | 90.1° |
O5 | C4 | C7 | H15 | 120.0° | 30.0° |
O5 | C4 | C7 | H16 | 120.0° | 149.9° |
N6 | C2 | C3 | C4 | 0.2° | 0.2° |
N6 | C2 | C1 | C3 | 179.9° | 179.7° |
N6 | C2 | C3 | C8 | 179.8° | 179.7° |
N6 | C2 | C1 | H11 | 0.0° | 90.3° |
N6 | C2 | C1 | H12 | 120.0° | 29.6° |
N6 | C2 | C1 | H13 | 120.0° | 149.7° |
C7 | C4 | C3 | C2 | 180.0° | 180.0° |
C7 | C4 | C3 | C8 | 0.3° | 0.0° |
C4 | C7 | H14 | H15 | 120.0° | 120.1° |
C4 | C7 | H14 | H16 | 120.0° | 120.1° |
C4 | C7 | H15 | H16 | 120.0° | 120.0° |
C4 | C3 | C2 | C1 | 179.9° | 180.0° |
C4 | C3 | C2 | C8 | 179.7° | 180.0° |
C4 | C3 | C8 | C9 | 115.8° | 76.6° |
C4 | C3 | C8 | S13 | 120.4° | 165.0° |
C3 | C4 | C7 | H14 | 179.8° | 90.0° |
C3 | C4 | C7 | H15 | 59.8° | 149.9° |
C3 | C4 | C7 | H16 | 60.2° | 30.0° |
C4 | C3 | C8 | H17 | 4.1° | 44.2° |
C1 | C2 | C3 | C8 | 0.2° | 0.0° |
C2 | C1 | H11 | H12 | 120.0° | 120.0° |
C2 | C1 | H11 | H13 | 120.0° | 120.0° |
C2 | C1 | H12 | H13 | 120.0° | 120.1° |
C2 | C3 | C8 | C9 | 63.8° | 103.4° |
C2 | C3 | C8 | S13 | 59.9° | 15.1° |
C3 | C2 | C1 | H11 | 179.9° | 90.0° |
C3 | C2 | C1 | H12 | 60.0° | 150.1° |
C3 | C2 | C1 | H13 | 59.9° | 30.0° |
C2 | C3 | C8 | H17 | 176.3° | 135.8° |
C3 | C8 | C9 | S13 | 125.2° | 119.6° |
C3 | C8 | C9 | H17 | 120.0° | 120.7° |
C3 | C8 | C9 | C10 | 179.9° | 169.5° |
C3 | C8 | S13 | H17 | 118.1° | 120.7° |
C3 | C8 | S13 | C12 | 141.8° | 166.9° |
C3 | C8 | C9 | H18 | 59.3° | 70.8° |
C3 | C8 | C9 | H19 | 59.5° | 49.6° |
F22 | C21 | C20 | C16 | 179.9° | 179.7° |
F22 | C21 | C20 | C19 | 179.8° | 180.0° |
F22 | C21 | C16 | C10 | 0.5° | 0.0° |
F22 | C21 | C16 | C17 | 179.5° | 180.0° |
F22 | C21 | C20 | H8 | 0.2° | 0.1° |
C8 | C9 | C10 | H18 | 120.6° | 119.8° |
C8 | C9 | C10 | H19 | 120.6° | 120.0° |
C9 | C8 | S13 | H17 | 116.6° | 119.7° |
C8 | C9 | C10 | C15 | 174.6° | 176.7° |
C8 | C9 | C10 | C16 | 66.1° | 64.9° |
C8 | C9 | C10 | N11 | 59.8° | 55.7° |
C9 | C8 | S13 | C12 | 16.6° | 47.3° |
C8 | C9 | H18 | H19 | 118.1° | 120.3° |
C10 | C9 | C8 | S13 | 54.8° | 70.9° |
C9 | C10 | C16 | C21 | 64.8° | 58.5° |
C9 | C10 | C15 | C16 | 120.7° | 118.5° |
C9 | C10 | C15 | N11 | 119.8° | 123.3° |
C9 | C10 | C16 | N11 | 126.8° | 123.1° |
C9 | C10 | C16 | C17 | 114.1° | 121.5° |
C9 | C10 | N11 | C12 | 18.1° | 19.8° |
C9 | C10 | C15 | H5 | 180.0° | 60.0° |
C9 | C10 | C15 | H6 | 60.0° | 180.0° |
C9 | C10 | C15 | H7 | 60.0° | 60.0° |
C10 | C9 | C8 | H17 | 60.1° | 48.8° |
C10 | C9 | H18 | H19 | 118.1° | 120.1° |
C8 | S13 | C12 | N11 | 20.5° | 15.2° |
C8 | S13 | C12 | N14 | 172.1° | 165.1° |
S13 | C8 | C9 | H18 | 65.9° | 48.8° |
S13 | C8 | C9 | H19 | 175.4° | 169.1° |
C21 | C20 | C19 | H8 | 180.0° | 179.9° |
C20 | C21 | C16 | C10 | 179.6° | 179.7° |
C20 | C21 | C16 | C17 | 0.7° | 0.3° |
C21 | C20 | C19 | F23 | 179.9° | 179.9° |
C21 | C20 | C19 | C18 | 0.1° | 0.0° |
C16 | C21 | C20 | C19 | 0.3° | 0.3° |
C21 | C16 | C10 | C15 | 52.4° | 60.0° |
C21 | C16 | C10 | C17 | 178.9° | 180.0° |
C21 | C16 | C10 | N11 | 168.4° | 178.4° |
C21 | C16 | C17 | C18 | 0.8° | 0.1° |
C21 | C16 | C17 | H4 | 179.2° | 180.0° |
C16 | C21 | C20 | H8 | 179.7° | 179.6° |
C20 | C19 | F23 | C18 | 179.9° | 179.9° |
C20 | C19 | C18 | C17 | 0.2° | 0.2° |
C20 | C19 | C18 | C24 | 179.4° | 180.0° |
C15 | C10 | C16 | N11 | 116.0° | 118.4° |
C15 | C10 | C16 | C17 | 128.7° | 120.0° |
C15 | C10 | N11 | C12 | 133.3° | 140.8° |
C10 | C15 | H5 | H6 | 120.0° | 120.0° |
C10 | C15 | H5 | H7 | 120.0° | 120.0° |
C10 | C15 | H6 | H7 | 120.0° | 120.1° |
C15 | C10 | C9 | H18 | 54.0° | 56.9° |
C15 | C10 | C9 | H19 | 64.8° | 63.3° |
C16 | C10 | N11 | C12 | 108.2° | 100.9° |
C10 | C16 | C17 | C18 | 179.8° | 180.0° |
C10 | C16 | C17 | H4 | 0.2° | 0.0° |
C16 | C10 | C15 | H5 | 59.3° | 58.5° |
C16 | C10 | C15 | H6 | 179.3° | 61.5° |
C16 | C10 | C15 | H7 | 60.7° | 178.5° |
C16 | C10 | C9 | H18 | 173.3° | 175.3° |
C16 | C10 | C9 | H19 | 54.6° | 55.1° |
N11 | C10 | C16 | C17 | 12.7° | 1.6° |
C10 | N11 | C12 | S13 | 21.4° | 1.8° |
C10 | N11 | C12 | N14 | 171.4° | 178.5° |
N11 | C10 | C15 | H5 | 60.2° | 176.7° |
N11 | C10 | C15 | H6 | 59.8° | 56.7° |
N11 | C10 | C15 | H7 | 179.8° | 63.3° |
N11 | C10 | C9 | H18 | 60.8° | 64.1° |
N11 | C10 | C9 | H19 | 179.6° | 175.7° |
C16 | C17 | C18 | C19 | 0.6° | 0.2° |
C16 | C17 | C18 | H4 | 180.0° | 179.9° |
C16 | C17 | C18 | C24 | 179.8° | 180.0° |
S13 | C12 | N11 | N14 | 167.2° | 179.7° |
S13 | C12 | N14 | H1 | 0.0° | 179.7° |
S13 | C12 | N14 | H2 | 180.0° | 0.6° |
C12 | S13 | C8 | H17 | 100.0° | 72.4° |
F23 | C19 | C18 | C17 | 179.9° | 179.7° |
F23 | C19 | C18 | C24 | 0.7° | 0.1° |
F23 | C19 | C20 | H8 | 0.1° | 0.0° |
C19 | C18 | C17 | C24 | 179.2° | 179.8° |
C19 | C18 | C24 | C25 | 52.8° | 130.1° |
C19 | C18 | C24 | C29 | 128.8° | 50.3° |
C19 | C18 | C17 | H4 | 179.4° | 179.7° |
C18 | C19 | C20 | H8 | 179.9° | 179.9° |
N11 | C12 | N14 | H1 | 167.5° | 0.0° |
N11 | C12 | N14 | H2 | 12.5° | 179.7° |
C12 | N14 | H1 | H2 | 180.0° | 179.7° |
C17 | C18 | C24 | C25 | 126.4° | 49.8° |
C17 | C18 | C24 | C29 | 52.0° | 129.9° |
C18 | C24 | C25 | C29 | 178.4° | 179.7° |
C18 | C24 | C25 | N26 | 179.3° | 180.0° |
C18 | C24 | C29 | N28 | 179.1° | 180.0° |
C24 | C18 | C17 | H4 | 0.1° | 0.1° |
C18 | C24 | C25 | H22 | 0.7° | 0.0° |
C18 | C24 | C29 | H23 | 0.9° | 0.1° |
C24 | C25 | N26 | H22 | 180.0° | 180.0° |
C24 | C25 | N26 | C27 | 0.6° | 0.0° |
C25 | C24 | C29 | N28 | 0.7° | 0.3° |
C25 | C24 | C29 | H23 | 179.4° | 179.7° |
N26 | C25 | C24 | C29 | 0.9° | 0.3° |
C25 | N26 | C27 | N28 | 0.2° | 0.3° |
C25 | N26 | C27 | H10 | 179.8° | 180.0° |
C24 | C29 | N28 | H23 | 180.0° | 179.9° |
C24 | C29 | N28 | C27 | 0.2° | 0.0° |
C29 | C24 | C25 | H22 | 179.1° | 179.7° |
N26 | C27 | N28 | C29 | 0.1° | 0.3° |
N26 | C27 | N28 | H10 | 180.0° | 179.7° |
C27 | N26 | C25 | H22 | 179.4° | 180.0° |
C29 | N28 | C27 | H10 | 179.9° | 180.0° |
C27 | N28 | C29 | H23 | 179.8° | 180.0° |
H5 | C15 | H6 | H7 | 120.0° | 120.0° |
H11 | C1 | H12 | H13 | 120.0° | 119.9° |
H14 | C7 | H15 | H16 | 120.0° | 119.9° |
H17 | C8 | C9 | H18 | 179.3° | 168.4° |
H17 | C8 | C9 | H19 | 60.5° | 71.2° |