5PG
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N | CA | sing | 1.47Å | 1.46Å | |
| N | CN | sing | 1.47Å | 1.53Å | |
| CA | C | sing | 1.51Å | 1.51Å | |
| CA | CB | sing | 1.51Å | 1.57Å | |
| C | O | doub | 1.21Å | 1.26Å | |
| C | OXT | sing | 1.34Å | 1.33Å | |
| CB | CC1 | sing | 1.38Å | 1.37Å | Aromatic |
| CB | CC2 | doub | 1.38Å | 1.41Å | Aromatic |
| CC1 | CD1 | doub | 1.38Å | 1.44Å | Aromatic |
| CC2 | CD2 | sing | 1.38Å | 1.41Å | Aromatic |
| CD1 | CE | sing | 1.39Å | 1.42Å | Aromatic |
| CD2 | CE | doub | 1.39Å | 1.39Å | Aromatic |
| CE | OH | sing | 1.36Å | 1.38Å | |
| N | H | sing | 1.01Å | 1.00Å | |
| CA | HA | sing | 1.09Å | 1.10Å | |
| CN | HN1C | sing | 1.09Å | 1.10Å | |
| CN | HN2C | sing | 1.09Å | 1.10Å | |
| CN | HN3C | sing | 1.09Å | 1.10Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å | |
| CC1 | HC1 | sing | 1.08Å | 1.08Å | |
| CC2 | HC2 | sing | 1.08Å | 1.08Å | |
| CD1 | HD1 | sing | 1.08Å | 1.08Å | |
| CD2 | HD2 | sing | 1.08Å | 1.08Å | |
| OH | HH | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| CA | N | CN | 124.9° | 111.0° |
| N | CA | C | 108.3° | 109.5° |
| N | CA | CB | 107.5° | 109.5° |
| CA | N | H | 104.6° | 111.0° |
| N | CA | HA | 111.8° | 109.5° |
| CN | N | H | 104.6° | 111.0° |
| N | CN | HN1C | 109.5° | 109.4° |
| N | CN | HN2C | 109.4° | 109.5° |
| N | CN | HN3C | 109.4° | 109.5° |
| C | CA | CB | 110.2° | 109.5° |
| CA | C | O | 122.1° | 120.0° |
| CA | C | OXT | 113.2° | 120.1° |
| C | CA | HA | 109.1° | 109.4° |
| CA | CB | CC1 | 120.0° | 119.9° |
| CA | CB | CC2 | 118.8° | 119.9° |
| CB | CA | HA | 109.9° | 109.5° |
| O | C | OXT | 124.6° | 119.9° |
| C | OXT | HXT | 109.5° | 117.1° |
| CC1 | CB | CC2 | 121.1° | 120.1° |
| CB | CC1 | CD1 | 119.7° | 120.0° |
| CB | CC1 | HC1 | 120.1° | 119.9° |
| CB | CC2 | CD2 | 120.0° | 120.0° |
| CB | CC2 | HC2 | 120.0° | 120.0° |
| CC1 | CD1 | CE | 118.9° | 120.0° |
| CD1 | CC1 | HC1 | 120.2° | 120.0° |
| CC1 | CD1 | HD1 | 120.6° | 120.0° |
| CC2 | CD2 | CE | 119.2° | 119.9° |
| CD2 | CC2 | HC2 | 120.0° | 120.0° |
| CC2 | CD2 | HD2 | 120.4° | 120.0° |
| CD1 | CE | CD2 | 121.0° | 119.9° |
| CD1 | CE | OH | 120.3° | 120.1° |
| CE | CD1 | HD1 | 120.6° | 120.0° |
| CD2 | CE | OH | 118.8° | 120.0° |
| CE | CD2 | HD2 | 120.4° | 120.1° |
| CE | OH | HH | 109.5° | 114.0° |
| HN1C | CN | HN2C | 109.4° | 109.5° |
| HN1C | CN | HN3C | 109.5° | 109.5° |
| HN2C | CN | HN3C | 109.5° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| CA | N | CN | H | 120.0° | 123.9° |
| N | CA | C | CB | 117.3° | 120.0° |
| N | CA | C | HA | 121.9° | 120.0° |
| N | CA | CB | HA | 121.9° | 120.0° |
| N | CA | C | O | 15.3° | 0.0° |
| N | CA | C | OXT | 166.6° | 180.0° |
| N | CA | CB | CC1 | 70.9° | 140.0° |
| N | CA | CB | CC2 | 107.2° | 39.7° |
| CA | N | CN | HN1C | 9.6° | 180.0° |
| CA | N | CN | HN2C | 129.6° | 60.1° |
| CA | N | CN | HN3C | 110.3° | 60.0° |
| CN | N | CA | C | 92.5° | 85.0° |
| CN | N | CA | CB | 26.5° | 155.0° |
| CN | N | CA | HA | 147.2° | 35.0° |
| N | CN | HN1C | HN2C | 120.0° | 119.9° |
| N | CN | HN1C | HN3C | 120.0° | 120.0° |
| N | CN | HN2C | HN3C | 120.0° | 120.0° |
| C | CA | CB | HA | 120.3° | 119.9° |
| CA | C | O | OXT | 177.9° | 180.0° |
| C | CA | CB | CC1 | 171.4° | 100.0° |
| C | CA | CB | CC2 | 10.6° | 80.3° |
| C | CA | N | H | 147.5° | 39.0° |
| CA | C | OXT | HXT | 178.0° | 179.9° |
| CB | CA | C | O | 101.9° | 120.0° |
| CB | CA | C | OXT | 76.2° | 60.0° |
| CA | CB | CC1 | CC2 | 178.0° | 179.7° |
| CA | CB | CC1 | CD1 | 177.8° | 180.0° |
| CA | CB | CC2 | CD2 | 178.7° | 179.9° |
| CB | CA | N | H | 93.5° | 81.1° |
| CA | CB | CC1 | HC1 | 2.2° | 0.0° |
| CA | CB | CC2 | HC2 | 1.3° | 0.0° |
| O | C | CA | HA | 137.2° | 120.0° |
| O | C | OXT | HXT | 0.0° | 0.1° |
| OXT | C | CA | HA | 44.6° | 60.0° |
| CB | CC1 | CD1 | HC1 | 180.0° | 180.0° |
| CC1 | CB | CC2 | CD2 | 3.3° | 0.2° |
| CB | CC1 | CD1 | CE | 2.8° | 0.0° |
| CC1 | CB | CA | HA | 51.0° | 20.0° |
| CC1 | CB | CC2 | HC2 | 176.7° | 179.7° |
| CB | CC1 | CD1 | HD1 | 177.2° | 179.9° |
| CC2 | CB | CC1 | CD1 | 0.2° | 0.3° |
| CB | CC2 | CD2 | HC2 | 180.0° | 179.9° |
| CB | CC2 | CD2 | CE | 4.1° | 0.1° |
| CC2 | CB | CA | HA | 130.9° | 159.8° |
| CC2 | CB | CC1 | HC1 | 179.8° | 179.8° |
| CB | CC2 | CD2 | HD2 | 175.9° | 180.0° |
| CC1 | CD1 | CE | HD1 | 180.0° | 180.0° |
| CC1 | CD1 | CE | CD2 | 2.0° | 0.3° |
| CC1 | CD1 | CE | OH | 178.3° | 180.0° |
| CC2 | CD2 | CE | CD1 | 1.5° | 0.3° |
| CC2 | CD2 | CE | HD2 | 180.0° | 179.9° |
| CC2 | CD2 | CE | OH | 178.3° | 180.0° |
| CD1 | CE | CD2 | OH | 179.7° | 179.7° |
| CE | CD1 | CC1 | HC1 | 177.2° | 180.0° |
| CD1 | CE | CD2 | HD2 | 178.5° | 179.7° |
| CD1 | CE | OH | HH | 89.0° | 90.0° |
| CE | CD2 | CC2 | HC2 | 175.9° | 180.0° |
| CD2 | CE | CD1 | HD1 | 178.0° | 179.7° |
| CD2 | CE | OH | HH | 91.3° | 89.7° |
| OH | CE | CD1 | HD1 | 1.7° | 0.0° |
| OH | CE | CD2 | HD2 | 1.7° | 0.0° |
| H | N | CA | HA | 27.2° | 159.0° |
| H | N | CN | HN1C | 110.3° | 56.1° |
| H | N | CN | HN2C | 9.6° | 176.0° |
| H | N | CN | HN3C | 129.7° | 63.9° |
| HN1C | CN | HN2C | HN3C | 120.0° | 120.1° |
| HC1 | CC1 | CD1 | HD1 | 2.8° | 0.0° |
| HC2 | CC2 | CD2 | HD2 | 4.1° | 0.1° |
