Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5P4

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CC1sing1.53Å1.51Å
C1C2sing1.53Å1.49Å
C1Osing1.45Å1.47Å
O3C3doub1.22Å1.21Å
OC3sing1.35Å1.35Å
C3Nsing1.35Å1.35Å
NC4sing1.46Å1.46Å
C4C5sing1.53Å1.52Å
C4C15sing1.51Å1.51Å
C5C6sing1.53Å1.53Å
C15C14doub1.38Å1.40ÅAromatic
C15C10sing1.39Å1.41ÅAromatic
C14C13sing1.40Å1.39ÅAromatic
C6N1sing1.47Å1.48Å
C6C7sing1.53Å1.51Å
C17C18sing1.41Å1.44ÅAromatic
C17C16doub1.36Å1.35ÅAromatic
N1C10sing1.40Å1.43Å
N1C8sing1.35Å1.38Å
C10C11doub1.39Å1.40ÅAromatic
O1C8doub1.21Å1.22Å
C8C9sing1.51Å1.50Å
C18C19doub1.35Å1.33ÅAromatic
C13C16sing1.48Å1.48Å
C13C12doub1.40Å1.40ÅAromatic
C16O2sing1.35Å1.37ÅAromatic
C11C12sing1.38Å1.39ÅAromatic
C19O2sing1.34Å1.39ÅAromatic
C4H1sing1.09Å1.10Å
C5H2sing1.09Å1.10Å
C5H3sing1.09Å1.10Å
C6H4sing1.09Å1.10Å
C7H5sing1.09Å1.10Å
C7H6sing1.09Å1.10Å
C7H7sing1.09Å1.10Å
C9H8sing1.09Å1.10Å
C9H9sing1.09Å1.10Å
C9H10sing1.09Å1.10Å
C11H11sing1.08Å1.08Å
C12H12sing1.08Å1.08Å
C14H13sing1.08Å1.08Å
C1H14sing1.09Å1.10Å
C2H15sing1.09Å1.10Å
C2H16sing1.09Å1.10Å
C2H17sing1.09Å1.10Å
CH18sing1.09Å1.10Å
CH19sing1.09Å1.10Å
CH20sing1.09Å1.10Å
NH21sing0.97Å1.00Å
C19H22sing1.08Å1.08Å
C18H23sing1.08Å1.08Å
C17H24sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CC1C2112.6°109.5°
CC1O107.1°109.5°
CC1H14109.9°109.4°
C1CH18109.5°109.4°
C1CH19109.4°109.5°
C1CH20109.5°109.5°
C2C1O106.3°109.5°
C2C1H14110.3°109.5°
C1C2H15109.5°109.5°
C1C2H16109.4°109.5°
C1C2H17109.4°109.5°
C1OC3116.8°117.0°
OC1H14110.5°109.5°
O3C3O124.1°120.0°
O3C3N124.6°119.9°
OC3N111.3°120.0°
C3NC4128.4°120.0°
C3NH21115.8°120.0°
NC4C5114.4°109.3°
NC4C15114.4°109.3°
NC4H1107.0°109.2°
C4NH21115.8°120.0°
C5C4C15107.6°110.5°
C4C5C6113.8°108.9°
C5C4H1106.4°109.2°
C4C5H2108.4°109.6°
C4C5H3108.4°109.5°
C4C15C14122.8°118.8°
C4C15C10117.9°121.5°
C15C4H1106.5°109.3°
C5C6N1112.6°107.8°
C5C6C7111.5°109.8°
C6C5H2108.4°109.6°
C6C5H3108.4°109.6°
C5C6H4106.6°109.8°
C14C15C10119.2°119.7°
C15C14C13121.2°120.2°
C15C14H13119.4°119.9°
C15C10N1116.9°120.8°
C15C10C11120.1°120.3°
C14C13C16120.1°120.1°
C14C13C12118.8°119.8°
C13C14H13119.4°119.9°
N1C6C7111.6°109.9°
C6N1C10118.7°118.9°
C6N1C8115.9°120.5°
N1C6H4107.2°109.8°
C7C6H4106.9°109.8°
C6C7H5109.5°109.5°
C6C7H6109.5°109.5°
C6C7H7109.4°109.5°
C18C17C16106.6°106.7°
C17C18C19106.9°107.0°
C17C18H23126.6°126.5°
C18C17H24126.7°126.7°
C17C16C13132.9°125.9°
C17C16O2109.8°108.1°
C16C17H24126.7°126.6°
C10N1C8125.3°120.6°
N1C10C11123.0°119.0°
N1C8O1120.7°120.1°
N1C8C9119.5°120.0°
C10C11C12119.8°120.3°
C10C11H11120.1°119.9°
O1C8C9119.9°120.0°
C8C9H8109.5°109.4°
C8C9H9109.5°109.5°
C8C9H10109.5°109.5°
C18C19O2110.5°108.7°
C18C19H22124.8°125.6°
C19C18H23126.6°126.5°
C16C13C12121.2°120.1°
C13C16O2117.2°125.9°
C13C12C11120.9°119.7°
C13C12H12119.5°120.1°
C16O2C19106.2°109.4°
C12C11H11120.1°119.8°
C11C12H12119.5°120.2°
O2C19H22124.7°125.7°
H2C5H3109.5°109.6°
H5C7H6109.5°109.5°
H5C7H7109.5°109.5°
H6C7H7109.4°109.4°
H8C9H9109.4°109.5°
H8C9H10109.4°109.5°
H9C9H10109.5°109.5°
H15C2H16109.5°109.5°
H15C2H17109.5°109.5°
H16C2H17109.5°109.5°
H18CH19109.5°109.5°
H18CH20109.5°109.5°
H19CH20109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CC1C2O116.9°120.0°
CC1C2H14123.2°119.9°
CC1OH14119.7°119.9°
CC1OC381.0°150.0°
CC1C2H15180.0°60.1°
CC1C2H1660.0°60.0°
CC1C2H1760.0°180.0°
C1CH18H19120.0°120.0°
C1CH18H20120.0°120.0°
C1CH19H20120.0°120.1°
C2C1OH14119.7°120.1°
C2C1OC3158.4°90.0°
C1C2H15H16120.0°120.1°
C1C2H15H17120.0°120.0°
C1C2H16H17119.9°120.0°
C2C1CH18180.0°60.0°
C2C1CH1960.0°180.0°
C2C1CH2060.0°59.9°
C1OC3O312.0°0.0°
C1OC3N167.5°180.0°
OC1C2H1563.1°60.0°
OC1C2H1657.0°180.0°
OC1C2H17176.9°60.0°
OC1CH1863.5°60.0°
OC1CH19176.5°60.0°
OC1CH2056.5°180.0°
O3C3ON179.5°180.0°
O3C3NC4171.9°0.1°
O3C3NH218.1°180.0°
OC3NC48.6°180.0°
C3OC1H1438.7°30.1°
OC3NH21171.5°0.0°
C3NC4H21180.0°179.9°
C3NC4C5153.9°155.0°
C3NC4C1581.3°84.0°
C3NC4H136.3°35.6°
NC4C5C15128.3°120.3°
NC4C5H1117.9°119.4°
NC4C15H1118.0°119.5°
NC4C5C6176.4°171.7°
NC4C15C141.9°39.2°
NC4C15C10174.2°140.8°
NC4C5H263.0°51.8°
NC4C5H355.8°68.5°
C5C4C15H1113.7°120.2°
C4C5C6H2120.6°119.8°
C4C5C6H3120.6°119.8°
C5C4C15C14130.1°159.5°
C5C4C15C1045.9°20.5°
C4C5C6N120.8°63.3°
C4C5C6C7147.0°177.1°
C4C5H2H3118.0°120.2°
C4C5C6H496.6°56.3°
C5C4NH2126.1°25.0°
C15C4C5C655.3°51.4°
C4C15C14C10176.0°180.0°
C4C15C14C13175.7°179.8°
C4C15C10N10.3°0.3°
C4C15C10C11177.6°179.7°
C15C4C5H265.3°68.4°
C15C4C5H3175.9°171.3°
C4C15C14H134.3°0.1°
C15C4NH2198.7°95.9°
C5C6N1C7126.2°119.6°
C5C6N1H4117.0°119.5°
C5C6C7H4116.2°120.8°
C5C6N1C1027.5°44.6°
C5C6N1C8149.8°135.3°
C6C5C4H158.5°68.9°
C6C5H2H3118.0°120.4°
C5C6C7H5180.0°50.1°
C5C6C7H660.0°170.1°
C5C6C7H760.0°69.9°
C15C14C13H13180.0°179.9°
C14C15C10N1175.9°179.8°
C14C15C10C111.4°0.3°
C15C14C13C16176.9°180.0°
C15C14C13C121.9°0.0°
C14C15C4H1116.1°80.3°
C10C15C14C130.3°0.2°
C15C10N1C639.4°13.3°
C15C10N1C11177.3°180.0°
C15C10N1C8137.6°166.6°
C15C10C11C121.4°0.2°
C10C15C4H167.8°99.7°
C15C10C11H11178.6°179.9°
C10C15C14H13179.7°179.9°
C14C13C16C171.5°179.6°
C14C13C16C12178.8°179.9°
C14C13C16O2175.1°0.0°
C14C13C12C111.9°0.0°
C14C13C12H12178.1°180.0°
N1C6C7H4117.0°120.9°
C6N1C10C8177.0°180.0°
C6N1C10C11137.9°166.6°
C6N1C8O13.6°19.6°
C6N1C8C9176.0°160.5°
N1C6C5H299.9°56.5°
N1C6C5H3141.4°176.9°
N1C6C7H553.2°168.5°
N1C6C7H666.9°71.5°
N1C6C7H7173.2°48.4°
C7C6N1C1098.7°164.2°
C7C6N1C884.0°15.8°
C7C6C5H226.4°63.1°
C7C6C5H392.3°57.3°
C6C7H5H6120.0°120.0°
C6C7H5H7120.0°120.1°
C6C7H6H7119.9°120.0°
C18C17C16H24180.0°179.5°
C17C18C19H23180.0°179.7°
C18C17C16C13176.7°179.8°
C18C17C16O20.1°0.5°
C17C18C19O20.2°0.3°
C17C18C19H22179.8°179.8°
C16C17C18C190.1°0.5°
C17C16C13O2176.6°179.7°
C17C16C13C12177.2°0.3°
C17C16O2C190.2°0.3°
C16C17C18H23179.9°179.8°
C10N1C8O1179.3°160.5°
C10N1C8C91.1°19.5°
N1C10C11C12175.7°179.8°
C10N1C6H4144.5°74.9°
N1C10C11H114.3°0.1°
C8N1C10C1145.1°13.4°
N1C8O1C9179.6°180.0°
C8N1C6H432.8°105.1°
N1C8C9H8179.6°7.0°
N1C8C9H959.6°127.0°
N1C8C9H1060.4°113.0°
C10C11C12C130.2°0.1°
C10C11C12H11180.0°179.9°
C10C11C12H12179.8°179.9°
O1C8C9H80.0°173.0°
O1C8C9H9120.0°53.1°
O1C8C9H10120.0°67.0°
C8C9H8H9120.0°120.0°
C8C9H8H10120.0°120.0°
C8C9H9H10120.0°120.0°
C18C19O2C160.2°0.0°
C18C19O2H22180.0°179.9°
C19C18C17H24179.9°180.0°
C16C13C12C11176.9°179.9°
C13C16O2C19177.2°180.0°
C16C13C12H123.1°0.1°
C16C13C14H133.1°0.1°
C13C16C17H243.3°0.3°
C12C13C16O26.2°180.0°
C13C12C11H12180.0°180.0°
C13C12C11H11179.8°180.0°
C12C13C14H13178.1°180.0°
C16O2C19H22179.8°179.9°
O2C16C17H24180.0°179.9°
O2C19C18H23179.8°180.0°
H1C4C5H2179.1°171.3°
H1C4C5H362.1°51.0°
H1C4NH21143.7°144.5°
H2C5C6H4142.8°176.1°
H3C5C6H424.0°63.5°
H4C6C7H563.8°70.7°
H4C6C7H6176.2°49.3°
H4C6C7H756.2°169.3°
H5C7H6H7120.0°120.0°
H8C9H9H10119.9°120.0°
H11C11C12H120.2°0.0°
H14C1C2H1556.8°180.0°
H14C1C2H16176.8°60.0°
H14C1C2H1763.2°60.0°
H14C1CH1856.6°180.0°
H14C1CH1963.4°60.0°
H14C1CH20176.6°60.0°
H15C2H16H17120.0°120.0°
H18CH19H20120.0°120.0°
H22C19C18H230.2°0.1°
H23C18C17H240.1°0.3°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon