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5NE

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1BC1Adoub1.39Å1.40ÅAromatic
C1BC1Csing1.36Å1.40ÅAromatic
C1AC1Fsing1.36Å1.40ÅAromatic
C1OC1Csing1.51Å1.51Å
C1CC1Ddoub1.41Å1.46ÅAromatic
C1FC1Edoub1.40Å1.39ÅAromatic
C1DC1Esing1.42Å1.47ÅAromatic
C1DC1Gsing1.41Å1.39ÅAromatic
C1EC1Jsing1.46Å1.48ÅAromatic
C1GC1Hdoub1.36Å1.39ÅAromatic
C1JC1Lsing1.47Å1.49Å
C1JC1Idoub1.39Å1.39ÅAromatic
O1NC1Ldoub1.22Å1.25Å
C1LO1Msing1.35Å1.24Å
C1HC1Ising1.39Å1.40ÅAromatic
O1MH1sing0.97Å0.95Å
C1FH2sing1.08Å1.08Å
C1AH3sing1.08Å1.08Å
C1IH4sing1.08Å1.08Å
C1HH5sing1.08Å1.08Å
C1GH6sing1.08Å1.08Å
C1OH7sing1.09Å1.10Å
C1OH8sing1.09Å1.10Å
C1OH9sing1.09Å1.10Å
C1BH10sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1AC1BC1C121.2°121.1°
C1BC1AC1F121.9°120.8°
C1BC1AH3119.0°119.6°
C1AC1BH10119.4°119.5°
C1BC1CC1O124.2°120.2°
C1BC1CC1D118.6°119.6°
C1CC1BH10119.4°119.5°
C1AC1FC1E120.0°119.6°
C1AC1FH2120.0°120.1°
C1FC1AH3119.0°119.5°
C1OC1CC1D117.1°120.2°
C1CC1OH7109.5°109.4°
C1CC1OH8109.4°109.4°
C1CC1OH9109.5°109.5°
C1CC1DC1E118.4°119.2°
C1CC1DC1G120.0°121.3°
C1FC1EC1D119.9°119.7°
C1FC1EC1J123.6°121.5°
C1EC1FH2120.0°120.2°
C1EC1DC1G121.6°119.5°
C1DC1EC1J116.5°118.9°
C1DC1GC1H119.5°120.7°
C1DC1GH6120.2°119.6°
C1EC1JC1L120.8°120.7°
C1EC1JC1I118.9°118.6°
C1GC1HC1I121.8°121.9°
C1GC1HH5119.1°119.0°
C1HC1GH6120.3°119.7°
C1LC1JC1I120.3°120.7°
C1JC1LO1N116.4°120.0°
C1JC1LO1M120.9°120.0°
C1JC1IC1H121.7°120.6°
C1JC1IH4119.2°119.7°
O1NC1LO1M122.7°120.0°
C1LO1MH1109.5°117.0°
C1HC1IH4119.2°119.7°
C1IC1HH5119.1°119.1°
H7C1OH8109.5°109.5°
H7C1OH9109.5°109.5°
H8C1OH9109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1AC1BC1CH10180.0°180.0°
C1BC1AC1FH3180.0°180.0°
C1AC1BC1CC1O180.0°180.0°
C1AC1BC1CC1D0.6°0.0°
C1BC1AC1FC1E0.5°0.0°
C1BC1AC1FH2179.5°180.0°
C1CC1BC1AC1F0.1°0.0°
C1BC1CC1OC1D179.5°180.0°
C1BC1CC1DC1E0.4°0.0°
C1BC1CC1DC1G179.8°179.9°
C1CC1BC1AH3179.9°180.0°
C1BC1CC1OH789.7°90.0°
C1BC1CC1OH8150.3°30.0°
C1BC1CC1OH930.3°149.9°
C1AC1FC1EH2180.0°180.0°
C1AC1FC1EC1D0.6°0.0°
C1AC1FC1EC1J179.7°180.0°
C1FC1AC1BH10179.9°180.0°
C1OC1CC1DC1E179.9°180.0°
C1OC1CC1DC1G0.3°0.0°
C1CC1OH7H8120.0°119.9°
C1CC1OH7H9120.0°120.0°
C1CC1OH8H9120.0°120.0°
C1OC1CC1BH100.0°0.0°
C1CC1DC1EC1F0.1°0.0°
C1CC1DC1EC1G179.8°180.0°
C1CC1DC1EC1J179.8°180.0°
C1CC1DC1GC1H179.5°179.8°
C1CC1DC1GH60.6°0.0°
C1DC1CC1OH789.8°90.0°
C1DC1CC1OH830.2°150.0°
C1DC1CC1OH9150.2°30.0°
C1DC1CC1BH10179.5°180.0°
C1FC1EC1DC1J179.7°180.0°
C1FC1EC1DC1G179.6°180.0°
C1FC1EC1JC1L1.4°0.1°
C1FC1EC1JC1I179.3°179.7°
C1EC1FC1AH3179.5°180.0°
C1EC1DC1GC1H0.3°0.2°
C1DC1EC1JC1L178.3°180.0°
C1DC1EC1JC1I0.4°0.3°
C1DC1EC1FH2179.4°180.0°
C1EC1DC1GH6179.7°180.0°
C1GC1DC1EC1J0.1°0.1°
C1DC1GC1HH6180.0°179.8°
C1DC1GC1HC1I0.3°0.1°
C1DC1GC1HH5179.6°179.7°
C1EC1JC1LC1I177.8°179.6°
C1EC1JC1LO1N58.1°5.4°
C1EC1JC1LO1M123.9°174.3°
C1EC1JC1IC1H0.4°0.3°
C1JC1EC1FH20.3°0.0°
C1EC1JC1IH4179.6°179.7°
C1GC1HC1IC1J0.0°0.1°
C1GC1HC1IH5180.0°179.9°
C1GC1HC1IH4179.9°180.0°
C1JC1LO1NO1M178.0°179.7°
C1LC1JC1IC1H178.3°180.0°
C1JC1LO1MH1177.9°179.8°
C1LC1JC1IH41.7°0.1°
C1IC1JC1LO1N119.7°174.3°
C1IC1JC1LO1M58.3°6.1°
C1JC1IC1HH4180.0°179.9°
C1JC1IC1HH5180.0°180.0°
O1NC1LO1MH10.0°0.1°
C1IC1HC1GH6179.7°180.0°
H2C1FC1AH30.5°0.0°
H3C1AC1BH100.1°0.0°
H4C1IC1HH50.0°0.1°
H5C1HC1GH60.4°0.1°
H7C1OH8H9120.0°120.1°

248636

PDB entries from 2026-02-04

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