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5MP

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.41Å1.48ÅAromatic
C1C3doub1.35Å1.34ÅAromatic
C1C4sing1.51Å1.51Å
C2C5doub1.35Å1.34ÅAromatic
C2HC2sing1.08Å1.10Å
C3N6sing1.36Å1.36ÅAromatic
C3HC3sing1.08Å1.10Å
C4HC41sing1.09Å1.12Å
C4HC42sing1.09Å1.12Å
C4HC43sing1.09Å1.11Å
C5N6sing1.36Å1.36ÅAromatic
C5HC5sing1.08Å1.10Å
N6HN6sing0.97Å1.02Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C3106.2°107.4°
C2C1C4126.3°126.2°
C1C2C5105.5°107.4°
C1C2HC2130.9°126.4°
C3C1C4127.5°126.3°
C1C3N6109.7°108.2°
C1C3HC3124.5°125.9°
C1C4HC41106.3°109.4°
C1C4HC42126.3°109.5°
C1C4HC43106.3°109.4°
C5C2HC2123.6°126.2°
C2C5N6110.0°108.2°
C2C5HC5124.5°125.9°
N6C3HC3125.8°125.8°
C3N6C5108.6°108.7°
C3N6HN6125.8°125.6°
HC41C4HC42106.3°109.5°
HC41C4HC43103.2°109.4°
HC42C4HC43106.3°109.6°
N6C5HC5125.5°125.9°
C5N6HN6125.6°125.7°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1C3C4179.8°179.7°
C1C2C5HC2180.0°179.6°
C2C1C3N60.1°0.3°
C2C1C3HC3179.9°179.8°
C2C1C4HC4154.7°90.4°
C2C1C4HC42180.0°29.6°
C2C1C4HC4354.8°149.8°
C1C2C5N60.6°0.4°
C1C2C5HC5179.4°179.9°
C3C1C2C50.3°0.4°
C3C1C2HC2179.7°180.0°
C1C3N6HC3180.0°179.9°
C3C1C4HC41125.0°90.0°
C3C1C4HC420.3°150.0°
C3C1C4HC43125.5°29.9°
C1C3N6C50.5°0.0°
C1C3N6HN6179.5°180.0°
C4C1C2C5179.5°179.9°
C4C1C2HC20.5°0.3°
C4C1C3N6179.9°180.0°
C4C1C3HC30.1°0.1°
C1C4HC41HC42136.7°120.0°
C1C4HC41HC43111.6°119.9°
C1C4HC42HC43125.2°120.0°
C2C5N6C30.7°0.2°
C2C5N6HC5180.0°179.8°
C2C5N6HN6179.3°179.7°
HC2C2C5N6179.4°180.0°
HC2C2C5HC50.6°0.2°
C3N6C5HN6180.0°180.0°
C3N6C5HC5179.3°180.0°
HC3C3N6C5179.5°180.0°
HC3C3N6HN60.5°0.1°
HC41C4HC42HC43109.5°120.0°
HC5C5N6HN60.7°0.0°

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PDB entries from 2026-01-14

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