5M7
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O19 | C17 | doub | 1.22Å | 1.37Å | |
| O18 | C17 | sing | 1.35Å | 1.23Å | |
| C21 | C24 | sing | 1.53Å | 1.53Å | |
| C21 | N20 | sing | 1.47Å | 1.46Å | |
| C24 | C25 | sing | 1.53Å | 1.52Å | |
| C17 | C3 | sing | 1.47Å | 1.47Å | |
| N20 | C22 | sing | 1.47Å | 1.47Å | |
| N20 | C2 | sing | 1.38Å | 1.45Å | |
| C22 | C23 | sing | 1.53Å | 1.54Å | |
| C25 | C23 | sing | 1.53Å | 1.51Å | |
| C3 | C2 | doub | 1.41Å | 1.47Å | Aromatic |
| C3 | C4 | sing | 1.40Å | 1.38Å | Aromatic |
| C14 | C16 | doub | 1.38Å | 1.39Å | Aromatic |
| C14 | C13 | sing | 1.38Å | 1.40Å | Aromatic |
| C16 | C15 | sing | 1.38Å | 1.40Å | Aromatic |
| C2 | N1 | sing | 1.32Å | 1.34Å | Aromatic |
| C13 | C11 | doub | 1.40Å | 1.41Å | Aromatic |
| C15 | C12 | doub | 1.38Å | 1.39Å | Aromatic |
| C11 | C12 | sing | 1.40Å | 1.41Å | Aromatic |
| C11 | C4 | sing | 1.48Å | 1.47Å | |
| C4 | C6 | doub | 1.42Å | 1.44Å | Aromatic |
| N1 | C5 | doub | 1.34Å | 1.37Å | Aromatic |
| C6 | C5 | sing | 1.42Å | 1.42Å | Aromatic |
| C6 | C7 | sing | 1.40Å | 1.41Å | Aromatic |
| C5 | C10 | sing | 1.41Å | 1.43Å | Aromatic |
| C7 | C8 | doub | 1.36Å | 1.37Å | Aromatic |
| C10 | C9 | doub | 1.36Å | 1.37Å | Aromatic |
| C8 | C9 | sing | 1.39Å | 1.42Å | Aromatic |
| C8 | CL1 | sing | 1.74Å | 1.70Å | |
| C7 | H1 | sing | 1.08Å | 1.08Å | |
| C9 | H2 | sing | 1.08Å | 1.08Å | |
| C10 | H3 | sing | 1.08Å | 1.08Å | |
| C12 | H4 | sing | 1.08Å | 1.08Å | |
| C13 | H5 | sing | 1.08Å | 1.08Å | |
| C14 | H6 | sing | 1.08Å | 1.08Å | |
| C15 | H7 | sing | 1.08Å | 1.08Å | |
| C16 | H8 | sing | 1.08Å | 1.08Å | |
| O18 | H9 | sing | 0.97Å | 0.95Å | |
| C21 | H10 | sing | 1.09Å | 1.10Å | |
| C21 | H11 | sing | 1.09Å | 1.10Å | |
| C22 | H12 | sing | 1.09Å | 1.10Å | |
| C22 | H13 | sing | 1.09Å | 1.10Å | |
| C23 | H14 | sing | 1.09Å | 1.10Å | |
| C23 | H15 | sing | 1.09Å | 1.10Å | |
| C24 | H16 | sing | 1.09Å | 1.10Å | |
| C24 | H17 | sing | 1.09Å | 1.10Å | |
| C25 | H18 | sing | 1.09Å | 1.10Å | |
| C25 | H19 | sing | 1.09Å | 1.10Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O19 | C17 | O18 | 119.3° | 120.0° |
| O19 | C17 | C3 | 111.8° | 120.0° |
| O18 | C17 | C3 | 128.8° | 120.0° |
| C17 | O18 | H9 | 109.5° | 117.0° |
| C24 | C21 | N20 | 111.6° | 109.5° |
| C21 | C24 | C25 | 110.8° | 109.3° |
| C24 | C21 | H10 | 108.9° | 109.5° |
| C24 | C21 | H11 | 108.9° | 109.4° |
| C21 | C24 | H16 | 109.1° | 109.5° |
| C21 | C24 | H17 | 109.1° | 109.6° |
| C21 | N20 | C22 | 111.3° | 111.2° |
| C21 | N20 | C2 | 114.8° | 110.9° |
| N20 | C21 | H10 | 109.0° | 109.5° |
| N20 | C21 | H11 | 109.0° | 109.5° |
| C24 | C25 | C23 | 110.1° | 109.2° |
| C25 | C24 | H16 | 109.1° | 109.5° |
| C25 | C24 | H17 | 109.2° | 109.5° |
| C24 | C25 | H18 | 109.3° | 109.5° |
| C24 | C25 | H19 | 109.3° | 109.5° |
| C17 | C3 | C2 | 120.5° | 120.4° |
| C17 | C3 | C4 | 120.2° | 120.4° |
| C22 | N20 | C2 | 111.0° | 111.0° |
| N20 | C22 | C23 | 111.5° | 109.5° |
| N20 | C22 | H12 | 109.0° | 109.5° |
| N20 | C22 | H13 | 108.9° | 109.4° |
| N20 | C2 | C3 | 118.7° | 119.3° |
| N20 | C2 | N1 | 120.1° | 119.3° |
| C22 | C23 | C25 | 110.5° | 109.3° |
| C23 | C22 | H12 | 109.0° | 109.5° |
| C23 | C22 | H13 | 109.0° | 109.4° |
| C22 | C23 | H14 | 109.2° | 109.5° |
| C22 | C23 | H15 | 109.2° | 109.5° |
| C25 | C23 | H14 | 109.2° | 109.5° |
| C25 | C23 | H15 | 109.2° | 109.6° |
| C23 | C25 | H18 | 109.3° | 109.5° |
| C23 | C25 | H19 | 109.3° | 109.5° |
| C2 | C3 | C4 | 119.3° | 119.2° |
| C3 | C2 | N1 | 121.1° | 121.4° |
| C3 | C4 | C11 | 121.0° | 121.1° |
| C3 | C4 | C6 | 119.2° | 117.8° |
| C16 | C14 | C13 | 120.1° | 120.2° |
| C14 | C16 | C15 | 121.0° | 120.3° |
| C16 | C14 | H6 | 120.0° | 119.9° |
| C14 | C16 | H8 | 119.5° | 119.9° |
| C14 | C13 | C11 | 119.0° | 119.9° |
| C14 | C13 | H5 | 120.5° | 120.1° |
| C13 | C14 | H6 | 120.0° | 120.0° |
| C16 | C15 | C12 | 119.7° | 120.1° |
| C16 | C15 | H7 | 120.1° | 119.9° |
| C15 | C16 | H8 | 119.5° | 119.8° |
| C2 | N1 | C5 | 119.7° | 122.0° |
| C13 | C11 | C12 | 120.2° | 119.7° |
| C13 | C11 | C4 | 122.9° | 120.1° |
| C11 | C13 | H5 | 120.5° | 120.1° |
| C15 | C12 | C11 | 120.1° | 119.9° |
| C15 | C12 | H4 | 120.0° | 120.1° |
| C12 | C15 | H7 | 120.2° | 119.9° |
| C12 | C11 | C4 | 117.0° | 120.2° |
| C11 | C12 | H4 | 120.0° | 120.1° |
| C11 | C4 | C6 | 119.8° | 121.1° |
| C4 | C6 | C5 | 118.0° | 119.2° |
| C4 | C6 | C7 | 121.0° | 121.1° |
| N1 | C5 | C6 | 122.7° | 120.4° |
| N1 | C5 | C10 | 119.3° | 120.7° |
| C5 | C6 | C7 | 121.0° | 119.7° |
| C6 | C5 | C10 | 118.0° | 119.0° |
| C6 | C7 | C8 | 119.4° | 119.7° |
| C6 | C7 | H1 | 120.3° | 120.2° |
| C5 | C10 | C9 | 120.2° | 119.9° |
| C5 | C10 | H3 | 119.9° | 120.1° |
| C7 | C8 | C9 | 120.9° | 120.7° |
| C7 | C8 | CL1 | 119.7° | 119.6° |
| C8 | C7 | H1 | 120.3° | 120.2° |
| C10 | C9 | C8 | 120.5° | 121.0° |
| C10 | C9 | H2 | 119.7° | 119.5° |
| C9 | C10 | H3 | 119.9° | 120.1° |
| C9 | C8 | CL1 | 119.4° | 119.6° |
| C8 | C9 | H2 | 119.7° | 119.5° |
| H10 | C21 | H11 | 109.5° | 109.5° |
| H12 | C22 | H13 | 109.5° | 109.5° |
| H14 | C23 | H15 | 109.4° | 109.6° |
| H16 | C24 | H17 | 109.5° | 109.6° |
| H18 | C25 | H19 | 109.5° | 109.6° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O19 | C17 | O18 | C3 | 177.8° | 180.0° |
| O19 | C17 | C3 | C2 | 62.4° | 86.3° |
| O19 | C17 | C3 | C4 | 117.0° | 93.7° |
| O19 | C17 | O18 | H9 | 0.0° | 0.0° |
| O18 | C17 | C3 | C2 | 119.7° | 93.7° |
| O18 | C17 | C3 | C4 | 60.9° | 86.2° |
| C24 | C21 | N20 | H10 | 120.3° | 120.0° |
| C24 | C21 | N20 | H11 | 120.3° | 119.9° |
| C21 | C24 | C25 | H16 | 120.2° | 119.9° |
| C21 | C24 | C25 | H17 | 120.2° | 120.0° |
| C24 | C21 | N20 | C22 | 40.9° | 61.8° |
| C24 | C21 | N20 | C2 | 86.3° | 174.1° |
| C21 | C24 | C25 | C23 | 63.5° | 57.7° |
| C24 | C21 | H10 | H11 | 119.0° | 120.0° |
| C21 | C24 | H16 | H17 | 119.4° | 120.2° |
| C21 | C24 | C25 | H18 | 56.6° | 177.5° |
| C21 | C24 | C25 | H19 | 176.4° | 62.2° |
| N20 | C21 | C24 | C25 | 21.9° | 59.2° |
| C21 | N20 | C22 | C2 | 129.2° | 124.0° |
| C21 | N20 | C22 | C23 | 66.1° | 61.8° |
| C21 | N20 | C2 | C3 | 43.9° | 118.5° |
| C21 | N20 | C2 | N1 | 137.5° | 61.6° |
| N20 | C21 | H10 | H11 | 119.1° | 120.0° |
| C21 | N20 | C22 | H12 | 54.2° | 178.2° |
| C21 | N20 | C22 | H13 | 173.6° | 58.2° |
| N20 | C21 | C24 | H16 | 142.1° | 179.1° |
| N20 | C21 | C24 | H17 | 98.3° | 60.7° |
| C24 | C25 | C23 | C22 | 38.9° | 57.6° |
| C24 | C25 | C23 | H18 | 120.1° | 119.9° |
| C24 | C25 | C23 | H19 | 120.1° | 119.9° |
| C25 | C24 | C21 | H10 | 142.2° | 60.8° |
| C25 | C24 | C21 | H11 | 98.5° | 179.2° |
| C24 | C25 | C23 | H14 | 81.3° | 62.2° |
| C24 | C25 | C23 | H15 | 159.1° | 177.6° |
| C25 | C24 | H16 | H17 | 119.4° | 120.1° |
| C24 | C25 | H18 | H19 | 119.7° | 120.2° |
| C17 | C3 | C2 | N20 | 0.1° | 0.0° |
| C17 | C3 | C2 | C4 | 179.4° | 180.0° |
| C17 | C3 | C2 | N1 | 178.7° | 180.0° |
| C17 | C3 | C4 | C11 | 1.8° | 0.0° |
| C17 | C3 | C4 | C6 | 179.4° | 179.9° |
| C3 | C17 | O18 | H9 | 177.8° | 180.0° |
| N20 | C22 | C23 | H12 | 120.3° | 120.0° |
| N20 | C22 | C23 | H13 | 120.3° | 119.9° |
| N20 | C22 | C23 | C25 | 22.7° | 59.1° |
| C22 | N20 | C2 | C3 | 171.2° | 117.3° |
| C22 | N20 | C2 | N1 | 10.2° | 62.6° |
| C22 | N20 | C21 | H10 | 79.4° | 58.2° |
| C22 | N20 | C21 | H11 | 161.2° | 178.3° |
| N20 | C22 | H12 | H13 | 119.1° | 120.0° |
| N20 | C22 | C23 | H14 | 142.9° | 60.7° |
| N20 | C22 | C23 | H15 | 97.4° | 179.2° |
| C2 | N20 | C22 | C23 | 63.1° | 174.2° |
| N20 | C2 | C3 | N1 | 178.6° | 179.9° |
| N20 | C2 | C3 | C4 | 179.3° | 179.9° |
| N20 | C2 | N1 | C5 | 179.2° | 179.9° |
| C2 | N20 | C21 | H10 | 153.4° | 65.8° |
| C2 | N20 | C21 | H11 | 34.1° | 54.2° |
| C2 | N20 | C22 | H12 | 176.6° | 54.2° |
| C2 | N20 | C22 | H13 | 57.2° | 65.9° |
| C22 | C23 | C25 | H14 | 120.2° | 119.9° |
| C22 | C23 | C25 | H15 | 120.2° | 120.0° |
| C23 | C22 | H12 | H13 | 119.1° | 120.0° |
| C22 | C23 | H14 | H15 | 119.5° | 120.1° |
| C22 | C23 | C25 | H18 | 81.2° | 177.5° |
| C22 | C23 | C25 | H19 | 159.0° | 62.3° |
| C25 | C23 | C22 | H12 | 97.6° | 179.2° |
| C25 | C23 | C22 | H13 | 143.0° | 60.8° |
| C25 | C23 | H14 | H15 | 119.5° | 120.2° |
| C23 | C25 | C24 | H16 | 176.4° | 177.6° |
| C23 | C25 | C24 | H17 | 56.7° | 62.3° |
| C23 | C25 | H18 | H19 | 119.7° | 120.1° |
| C2 | C3 | C4 | C11 | 178.8° | 180.0° |
| C2 | C3 | C4 | C6 | 0.0° | 0.0° |
| C3 | C2 | N1 | C5 | 0.7° | 0.0° |
| C4 | C3 | C2 | N1 | 0.7° | 0.0° |
| C3 | C4 | C11 | C13 | 77.8° | 115.3° |
| C3 | C4 | C11 | C12 | 101.5° | 65.0° |
| C3 | C4 | C11 | C6 | 178.8° | 179.9° |
| C3 | C4 | C6 | C5 | 0.7° | 0.0° |
| C3 | C4 | C6 | C7 | 179.6° | 180.0° |
| C16 | C14 | C13 | H6 | 180.0° | 179.8° |
| C14 | C16 | C15 | H8 | 180.0° | 179.8° |
| C16 | C14 | C13 | C11 | 0.8° | 0.0° |
| C14 | C16 | C15 | C12 | 0.1° | 0.5° |
| C16 | C14 | C13 | H5 | 179.2° | 180.0° |
| C14 | C16 | C15 | H7 | 179.9° | 180.0° |
| C13 | C14 | C16 | C15 | 0.8° | 0.2° |
| C14 | C13 | C11 | H5 | 180.0° | 180.0° |
| C14 | C13 | C11 | C12 | 0.3° | 0.0° |
| C14 | C13 | C11 | C4 | 179.0° | 179.7° |
| C13 | C14 | C16 | H8 | 179.2° | 180.0° |
| C16 | C15 | C12 | H7 | 180.0° | 179.5° |
| C16 | C15 | C12 | C11 | 0.5° | 0.5° |
| C16 | C15 | C12 | H4 | 179.5° | 179.5° |
| C15 | C16 | C14 | H6 | 179.2° | 180.0° |
| C2 | N1 | C5 | C6 | 0.1° | 0.1° |
| C2 | N1 | C5 | C10 | 179.5° | 180.0° |
| C13 | C11 | C12 | C15 | 0.4° | 0.3° |
| C13 | C11 | C12 | C4 | 179.4° | 179.7° |
| C13 | C11 | C4 | C6 | 103.4° | 64.7° |
| C13 | C11 | C12 | H4 | 179.6° | 179.8° |
| C11 | C13 | C14 | H6 | 179.1° | 179.7° |
| C15 | C12 | C11 | H4 | 180.0° | 179.9° |
| C15 | C12 | C11 | C4 | 179.7° | 180.0° |
| C12 | C15 | C16 | H8 | 179.9° | 179.7° |
| C12 | C11 | C4 | C6 | 77.3° | 115.0° |
| C12 | C11 | C13 | H5 | 179.7° | 179.9° |
| C11 | C12 | C15 | H7 | 179.5° | 180.0° |
| C11 | C4 | C6 | C5 | 179.5° | 180.0° |
| C11 | C4 | C6 | C7 | 0.9° | 0.1° |
| C4 | C11 | C12 | H4 | 0.2° | 0.1° |
| C4 | C11 | C13 | H5 | 1.0° | 0.3° |
| C4 | C6 | C5 | N1 | 0.8° | 0.0° |
| C4 | C6 | C5 | C7 | 179.7° | 179.9° |
| C4 | C6 | C5 | C10 | 179.8° | 179.9° |
| C4 | C6 | C7 | C8 | 179.7° | 179.9° |
| C4 | C6 | C7 | H1 | 0.3° | 0.0° |
| N1 | C5 | C6 | C10 | 179.4° | 179.9° |
| N1 | C5 | C6 | C7 | 179.5° | 179.9° |
| N1 | C5 | C10 | C9 | 179.5° | 179.9° |
| N1 | C5 | C10 | H3 | 0.5° | 0.0° |
| C5 | C6 | C7 | C8 | 0.0° | 0.0° |
| C6 | C5 | C10 | C9 | 0.0° | 0.0° |
| C5 | C6 | C7 | H1 | 180.0° | 180.0° |
| C6 | C5 | C10 | H3 | 179.9° | 179.9° |
| C7 | C6 | C5 | C10 | 0.1° | 0.0° |
| C6 | C7 | C8 | H1 | 180.0° | 179.9° |
| C6 | C7 | C8 | C9 | 0.2° | 0.0° |
| C6 | C7 | C8 | CL1 | 179.2° | 180.0° |
| C5 | C10 | C9 | H3 | 180.0° | 179.9° |
| C5 | C10 | C9 | C8 | 0.2° | 0.0° |
| C5 | C10 | C9 | H2 | 179.8° | 180.0° |
| C7 | C8 | C9 | C10 | 0.3° | 0.0° |
| C7 | C8 | C9 | CL1 | 179.4° | 180.0° |
| C7 | C8 | C9 | H2 | 179.7° | 180.0° |
| C10 | C9 | C8 | H2 | 180.0° | 180.0° |
| C10 | C9 | C8 | CL1 | 179.1° | 180.0° |
| C9 | C8 | C7 | H1 | 179.9° | 180.0° |
| C8 | C9 | C10 | H3 | 179.9° | 179.9° |
| CL1 | C8 | C7 | H1 | 0.8° | 0.1° |
| CL1 | C8 | C9 | H2 | 0.9° | 0.0° |
| H2 | C9 | C10 | H3 | 0.1° | 0.1° |
| H4 | C12 | C15 | H7 | 0.5° | 0.0° |
| H5 | C13 | C14 | H6 | 0.8° | 0.2° |
| H6 | C14 | C16 | H8 | 0.8° | 0.2° |
| H7 | C15 | C16 | H8 | 0.1° | 0.2° |
| H10 | C21 | C24 | H16 | 97.6° | 59.1° |
| H10 | C21 | C24 | H17 | 22.0° | 179.3° |
| H11 | C21 | C24 | H16 | 21.7° | 60.9° |
| H11 | C21 | C24 | H17 | 141.3° | 59.2° |
| H12 | C22 | C23 | H14 | 22.6° | 59.3° |
| H12 | C22 | C23 | H15 | 142.2° | 60.8° |
| H13 | C22 | C23 | H14 | 96.8° | 179.3° |
| H13 | C22 | C23 | H15 | 22.8° | 59.2° |
| H14 | C23 | C25 | H18 | 158.6° | 57.6° |
| H14 | C23 | C25 | H19 | 38.8° | 177.9° |
| H15 | C23 | C25 | H18 | 39.0° | 62.5° |
| H15 | C23 | C25 | H19 | 80.8° | 57.7° |
| H16 | C24 | C25 | H18 | 63.6° | 62.6° |
| H16 | C24 | C25 | H19 | 56.3° | 57.7° |
| H17 | C24 | C25 | H18 | 176.8° | 57.5° |
| H17 | C24 | C25 | H19 | 63.4° | 177.8° |






