Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5LL

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O2C2doub1.22Å1.24Å
N3C2sing1.34Å1.34Å
N3C4sing1.35Å1.35Å
C2N1sing1.34Å1.31Å
O4C4doub1.22Å1.32Å
C4C5sing1.47Å1.38Å
N1C6sing1.35Å1.32Å
C6C5sing1.47Å1.46Å
C6O6doub1.22Å1.26Å
C5CAHdoub1.40Å1.51Å
CAHCAGsing1.39Å1.45Å
CAFCAGdoub1.38Å1.30Å
CAFCAEsing1.41Å1.38Å
CAACAEdoub1.39Å1.37ÅAromatic
CAACABsing1.40Å1.40ÅAromatic
CAEOADsing1.35Å1.28ÅAromatic
CABCACdoub1.35Å1.37ÅAromatic
OADCACsing1.34Å1.40ÅAromatic
N1H2sing0.97Å1.00Å
N3H3sing0.97Å1.00Å
CAAH4sing1.08Å1.08Å
CABH5sing1.08Å1.08Å
CACH6sing1.08Å1.08Å
CAFH7sing1.08Å1.08Å
CAGH9sing1.08Å1.08Å
CAHH11sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O2C2N3113.9°118.3°
O2C2N1124.9°118.3°
C2N3C4119.3°121.5°
N3C2N1120.8°123.4°
C2N3H3120.4°119.2°
N3C4O4117.7°120.9°
N3C4C5122.7°118.3°
C4N3H3120.3°119.3°
C2N1C6122.4°121.5°
C2N1H2118.8°119.3°
O4C4C5119.3°120.8°
C4C5C6113.7°117.1°
C4C5CAH118.6°121.5°
N1C6C5119.7°118.2°
N1C6O6120.0°120.9°
C6N1H2118.8°119.2°
C5C6O6120.2°120.9°
C6C5CAH125.6°121.4°
C5CAHCAG117.7°120.0°
C5CAHH11121.1°120.0°
CAHCAGCAF103.2°120.0°
CAHCAGH9128.4°120.0°
CAGCAHH11121.2°120.0°
CAGCAFCAE124.6°120.0°
CAGCAFH7117.7°120.0°
CAFCAGH9128.4°120.0°
CAFCAECAA119.6°126.2°
CAFCAEOAD122.9°126.1°
CAECAFH7117.7°120.0°
CAECAACAB103.8°106.5°
CAACAEOAD116.2°107.7°
CAECAAH4128.1°126.7°
CAACABCAC105.3°107.3°
CABCAAH4128.1°126.8°
CAACABH5127.3°126.4°
CAEOADCAC102.4°109.4°
CABCACOAD111.5°109.1°
CACCABH5127.4°126.3°
CABCACH6124.2°125.4°
OADCACH6124.2°125.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O2C2N3N1172.9°179.9°
O2C2N3C4165.1°180.0°
O2C2N1C6175.2°180.0°
O2C2N1H24.8°0.1°
O2C2N3H314.9°0.1°
C2N3C4H3180.0°179.9°
C2N3C4O4172.5°179.8°
C2N3C4C513.5°0.0°
N3C2N1C63.1°0.1°
N3C2N1H2176.9°180.0°
C4N3C2N17.8°0.1°
N3C4O4C5174.3°179.7°
N3C4C5C67.9°0.0°
N3C4C5CAH172.2°180.0°
C2N1C6H2180.0°179.9°
C2N1C6C58.4°0.1°
C2N1C6O6174.2°180.0°
N1C2N3H3172.1°179.9°
O4C4C5C6178.2°179.7°
O4C4C5CAH13.9°0.2°
O4C4N3H37.5°0.3°
C4C5C6N12.9°0.0°
C4C5C6CAH163.0°180.0°
C4C5C6O6179.7°180.0°
C4C5CAHCAG136.6°170.7°
C5C4N3H3166.5°180.0°
C4C5CAHH1143.4°9.4°
N1C6C5O6177.4°180.0°
N1C6C5CAH160.1°180.0°
C6C5CAHCAG61.1°9.2°
C5C6N1H2171.6°179.9°
C6C5CAHH11118.9°170.7°
O6C6C5CAH17.3°0.0°
O6C6N1H25.8°0.1°
C5CAHCAGH11180.0°179.9°
C5CAHCAGCAF123.4°174.6°
C5CAHCAGH956.6°5.5°
CAHCAGCAFH9180.0°179.9°
CAHCAGCAFCAE178.5°180.0°
CAHCAGCAFH71.6°0.1°
CAGCAFCAEH7180.0°179.9°
CAGCAFCAECAA180.0°180.0°
CAGCAFCAEOAD13.4°0.2°
CAFCAGCAHH1156.6°5.3°
CAFCAECAAOAD167.5°179.9°
CAFCAECAACAB177.0°179.9°
CAFCAEOADCAC175.2°179.9°
CAFCAECAAH43.0°0.2°
CAECAFCAGH91.6°0.1°
CAECAACABH4180.0°179.7°
CAECAACABCAC6.2°0.0°
CAACAEOADCAC8.1°0.0°
CAECAACABH5173.8°180.0°
CAACAECAFH70.0°0.1°
CABCAACAEOAD9.5°0.0°
CAACABCACH5180.0°180.0°
CAACABCACOAD2.0°0.0°
CAACABCACH6178.0°179.9°
CAEOADCACCAB3.5°0.0°
OADCAECAAH4170.5°179.7°
CAEOADCACH6176.5°179.9°
OADCAECAFH7166.6°180.0°
CABCACOADH6180.0°179.9°
CACCABCAAH4173.8°179.7°
OADCACCABH5178.1°180.0°
H4CAACABH56.2°0.3°
H5CABCACH61.9°0.1°
H7CAFCAGH9178.4°180.0°
H9CAGCAHH11123.4°174.6°

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon