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5L3

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.53Å1.50Å
C1O5sing1.43Å1.42Å
C1SAGsing1.81Å1.79Å
O2CBEsing1.34Å1.39Å
O2C2sing1.45Å1.50Å
C5C4sing1.53Å1.52Å
C5C6sing1.53Å1.45Å
C5O5sing1.43Å1.50Å
CBICBEsing1.51Å1.49Å
CBEOBHdoub1.21Å1.20Å
C2C3sing1.53Å1.47Å
C3O3sing1.43Å1.49Å
C3C4sing1.53Å1.49Å
C4O4sing1.43Å1.44Å
C6O6sing1.43Å1.43Å
SAGOAHdoub1.42Å1.46Å
SAGOAJdoub1.42Å1.46Å
SAGNABsing1.66Å1.37Å
NABCACsing1.47Å1.44Å
NABCAAsing1.47Å1.45Å
CACCADsing1.53Å1.52Å
CADCAEsing1.53Å1.45Å
CAACAFsing1.53Å1.51Å
CAFCAEsing1.53Å1.43Å
CAEOAKsing1.43Å1.48Å
OAKSALsing1.52Å1.48Å
SALOANdoub1.42Å1.43Å
SALOAOdoub1.42Å1.40Å
SALNAMsing1.66Å1.51Å
C1H1sing1.09Å1.10Å
C5H5sing1.09Å1.10Å
CBIH3Asing1.09Å1.10Å
CBIH4Asing1.09Å1.10Å
CBIH5Asing1.09Å1.10Å
C2H2sing1.09Å1.10Å
C3H3sing1.09Å1.10Å
O3HO3sing0.97Å0.95Å
C4H4sing1.09Å1.10Å
O4HO4sing0.97Å0.95Å
C6H61sing1.09Å1.10Å
C6H62sing1.09Å1.10Å
O6HO6sing0.97Å0.95Å
CACH16sing1.09Å1.10Å
CACH17sing1.09Å1.10Å
CADH18sing1.09Å1.10Å
CADH19sing1.09Å1.10Å
CAAH20sing1.09Å1.10Å
CAFH21sing1.09Å1.10Å
CAFH22sing1.09Å1.10Å
CAEH23sing1.09Å1.10Å
NAMH24sing0.97Å1.00Å
NAMH25sing0.97Å1.00Å
CAAH14sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1O5112.4°109.5°
C2C1SAG116.3°109.5°
C1C2O2108.6°109.5°
C1C2C3117.0°109.1°
C2C1H1110.5°109.5°
C1C2H2106.2°109.5°
O5C1SAG98.4°109.4°
C1O5C5115.6°114.1°
O5C1H1111.6°109.5°
C1SAGOAH98.6°110.5°
C1SAGOAJ114.7°110.6°
C1SAGNAB106.3°104.5°
SAGC1H1107.0°109.5°
CBEO2C2124.7°116.9°
O2CBECBI118.9°120.0°
O2CBEOBH120.7°120.1°
O2C2C3111.4°109.5°
O2C2H2106.4°109.6°
C4C5C6113.8°109.4°
C4C5O599.8°109.4°
C5C4C3107.0°109.2°
C5C4O4104.7°109.6°
C4C5H5108.6°109.4°
C5C4H4110.1°109.5°
C6C5O5115.7°109.5°
C5C6O6115.5°109.4°
C6C5H5109.6°109.5°
C5C6H61107.9°109.5°
C5C6H62107.9°109.5°
O5C5H5108.8°109.5°
CBICBEOBH120.4°119.9°
CBECBIH3A109.5°109.5°
CBECBIH4A109.4°109.5°
CBECBIH5A109.5°109.5°
C2C3O3109.3°109.5°
C2C3C4120.2°109.1°
C3C2H2106.6°109.6°
C2C3H3105.3°109.5°
O3C3C4110.5°109.6°
O3C3H3105.1°109.5°
C3O3HO3109.5°114.0°
C3C4O4113.0°109.5°
C4C3H3105.1°109.6°
C3C4H4110.5°109.4°
O4C4H4111.3°109.6°
C4O4HO4109.5°114.0°
O6C6H61107.9°109.4°
O6C6H62108.0°109.5°
C6O6HO6109.5°114.0°
OAHSAGOAJ102.2°121.0°
OAHSAGNAB117.3°104.3°
OAJSAGNAB116.6°104.3°
SAGNABCAC119.7°120.6°
SAGNABCAA114.4°120.6°
CACNABCAA119.4°118.8°
NABCACCAD112.5°108.7°
NABCACH16108.7°109.6°
NABCACH17108.7°109.6°
NABCAACAF115.8°108.8°
NABCAAH20107.9°109.6°
NABCAAH14107.9°109.6°
CACCADCAE117.2°109.3°
CADCACH16108.7°109.6°
CADCACH17108.7°109.6°
CACCADH18107.5°109.5°
CACCADH19107.5°109.5°
CADCAECAF118.2°109.7°
CADCAEOAK105.4°109.5°
CAECADH18107.5°109.5°
CAECADH19107.5°109.5°
CADCAEH23111.7°109.4°
CAACAFCAE110.2°109.2°
CAFCAAH20107.9°109.6°
CAACAFH21109.3°109.5°
CAACAFH22109.3°109.5°
CAFCAAH14107.9°109.6°
CAFCAEOAK97.0°109.6°
CAECAFH21109.3°109.6°
CAECAFH22109.3°109.5°
CAFCAEH23112.0°109.2°
CAEOAKSAL126.7°114.0°
OAKCAEH23111.2°109.4°
OAKSALOAN122.1°106.5°
OAKSALOAO96.2°106.4°
OAKSALNAM115.5°107.2°
OANSALOAO88.5°123.2°
OANSALNAM120.4°106.4°
OAOSALNAM99.3°106.4°
SALNAMH24109.5°119.9°
SALNAMH25109.5°120.0°
H3ACBIH4A109.5°109.5°
H3ACBIH5A109.5°109.5°
H4ACBIH5A109.4°109.4°
H61C6H62109.5°109.5°
H16CACH17109.5°109.7°
H18CADH19109.5°109.4°
H20CAAH14109.4°109.7°
H21CAFH22109.5°109.5°
H24NAMH25109.4°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1O5SAG123.1°120.0°
C2C1O5H1124.8°120.0°
C2C1SAGH1124.0°120.0°
C1C2O2CBE104.0°150.0°
C1C2O2C3130.2°119.6°
C1C2O2H2114.0°120.1°
C2C1O5C546.2°61.1°
C1C2C3H2118.7°119.9°
C1C2C3O3142.3°176.8°
C1C2C3C413.0°57.0°
C2C1SAGOAH163.5°68.4°
C2C1SAGOAJ88.7°68.3°
C2C1SAGNAB41.6°180.0°
C1C2C3H3105.2°63.0°
O5C1SAGH1115.8°120.0°
O5C1C2O2114.4°62.3°
C1O5C5C474.8°61.1°
C1O5C5C647.8°58.8°
O5C1C2C312.6°57.6°
O5C1SAGOAH43.4°171.6°
O5C1SAGOAJ151.1°51.6°
O5C1SAGNAB78.5°60.0°
C1O5C5H5171.6°178.9°
O5C1C2H2131.5°177.6°
SAGC1C2O22.1°57.7°
SAGC1O5C5169.3°178.9°
SAGC1C2C3125.0°177.5°
C1SAGOAHOAJ117.7°131.5°
C1SAGOAHNAB113.5°111.7°
C1SAGOAJNAB125.1°111.8°
C1SAGNABCAC122.5°90.0°
C1SAGNABCAA86.1°90.3°
SAGC1C2H2116.1°62.5°
O2CBECBIOBH178.2°179.9°
CBEO2C2C3125.8°90.4°
O2CBECBIH3A178.2°0.0°
O2CBECBIH4A58.2°120.0°
O2CBECBIH5A61.8°120.0°
CBEO2C2H210.0°29.9°
C2O2CBECBI37.0°180.0°
C2O2CBEOBH144.8°0.1°
O2C2C3H2115.6°120.3°
O2C2C3O316.7°57.0°
O2C2C3C4112.7°62.9°
O2C2C1H1120.2°177.7°
O2C2C3H3129.1°177.1°
C4C5C6O5114.8°119.9°
C4C5C6H5121.8°120.0°
C4C5O5H5113.6°120.0°
C5C4C3C242.6°57.0°
C5C4C3O3171.4°176.8°
C5C4C3O4114.7°119.9°
C5C4C3H4119.9°119.9°
C5C4O4H4118.9°120.2°
C4C5C6O6125.5°175.0°
C5C4C3H375.7°62.9°
C5C4O4HO4180.0°60.0°
C4C5C6H61113.6°55.0°
C4C5C6H624.6°65.0°
C6C5O5H5123.8°120.1°
C6C5C4C357.1°62.4°
C6C5C4O463.1°57.5°
C5C6O6H61120.9°120.0°
C5C6O6H62120.9°120.0°
C6C5C4H4177.2°177.8°
C5C6H61H62117.2°120.1°
C5C6O6HO6180.0°180.0°
O5C5C4C366.8°57.6°
O5C5C4O4173.0°177.5°
O5C5C6O610.7°65.1°
C5O5C1H178.5°58.9°
O5C5C4H453.3°62.3°
O5C5C6H61131.6°175.0°
O5C5C6H62110.2°54.9°
CBECBIH3AH4A120.0°120.0°
CBECBIH3AH5A120.0°120.0°
CBECBIH4AH5A120.0°120.0°
OBHCBECBIH3A0.0°180.0°
OBHCBECBIH4A120.0°60.0°
OBHCBECBIH5A120.0°60.0°
C2C3O3C4134.4°119.6°
C2C3O3H3112.6°120.1°
C2C3C4H3118.3°119.9°
C2C3C4O4157.3°176.9°
C3C2C1H1112.8°62.4°
C2C3O3HO3180.0°180.0°
C2C3C4H477.3°62.9°
O3C3C4H3112.9°120.2°
O3C3C4O473.9°63.2°
O3C3C2H299.0°63.2°
O3C3C4H451.5°56.9°
C3C4O4H4125.0°120.1°
C3C4C5H5179.5°177.6°
C4C3C2H2131.7°176.9°
C4C3O3HO345.6°60.4°
C3C4O4HO463.9°179.7°
O4C4C5H559.3°62.5°
O4C4C3H339.0°57.0°
O6C6C5H5112.7°55.0°
O6C6H61H62117.3°120.0°
OAHSAGOAJNAB129.3°116.7°
OAHSAGNABCAC128.4°26.1°
OAHSAGNABCAA23.0°153.6°
OAHSAGC1H172.4°51.7°
OAJSAGNABCAC6.8°153.9°
OAJSAGNABCAA144.6°25.8°
OAJSAGC1H135.3°171.6°
SAGNABCACCAA150.0°179.7°
SAGNABCACCAD177.7°126.4°
SAGNABCAACAF144.9°126.4°
NABSAGC1H1165.7°59.9°
SAGNABCACH1661.8°6.6°
SAGNABCACH1757.3°113.8°
SAGNABCAAH2094.1°113.8°
SAGNABCAAH1424.0°6.6°
NABCACCADH16120.5°119.8°
NABCACCADH17120.5°119.7°
NABCACCADCAE33.1°54.6°
CACNABCAACAF6.6°53.9°
NABCACH16H17118.6°120.4°
NABCACCADH18154.2°65.4°
NABCACCADH1988.1°174.6°
CACNABCAAH20114.4°65.9°
CACNABCAAH14127.5°173.7°
CAANABCACCAD32.2°53.9°
NABCAACAFH20120.9°119.8°
NABCAACAFH14120.9°119.8°
NABCAACAFCAE46.0°54.5°
CAANABCACH1688.2°173.7°
CAANABCACH17152.7°65.8°
NABCAAH20H14117.1°120.4°
NABCAACAFH21166.1°174.6°
NABCAACAFH2274.1°65.3°
CACCADCAEH18121.1°120.0°
CACCADCAEH19121.1°120.0°
CACCADCAECAF7.0°61.1°
CACCADCAEOAK113.9°178.6°
CADCACH16H17118.6°120.4°
CACCADH18H19116.5°120.1°
CACCADCAEH23125.1°58.7°
CADCAECAFCAA45.6°61.1°
CADCAECAFOAK111.7°120.2°
CADCAECAFH23132.0°120.0°
CADCAEOAKH23121.2°119.9°
CADCAEOAKSAL132.1°96.7°
CAECADCACH1687.4°174.4°
CAECADCACH17153.5°65.1°
CAECADH18H19116.5°120.0°
CADCAECAFH21165.7°179.0°
CADCAECAFH2274.5°58.8°
CAACAFCAEH21120.1°119.9°
CAACAFCAEH22120.1°119.9°
CAACAFCAEOAK157.3°178.7°
CAFCAAH20H14117.1°120.3°
CAACAFH21H22119.7°120.1°
CAACAFCAEH2386.4°58.9°
CAFCAEOAKH23116.9°119.8°
CAFCAEOAKSAL106.1°143.0°
CAFCAECADH18114.1°58.9°
CAFCAECADH19128.1°178.9°
CAECAFCAAH2074.9°65.3°
CAECAFH21H22119.7°120.1°
CAECAFCAAH14167.0°174.3°
CAEOAKSALOAN63.8°173.2°
CAEOAKSALOAO155.9°40.3°
CAEOAKSALNAM100.7°73.2°
OAKCAECADH187.2°61.4°
OAKCAECADH19124.9°58.6°
OAKCAECAFH2182.6°58.8°
OAKCAECAFH2237.3°61.4°
OAKSALOANOAO96.4°123.0°
OAKSALOANNAM163.7°114.1°
OAKSALOAONAM117.2°114.0°
SALOAKCAEH2310.8°23.3°
OAKSALNAMH24180.0°155.1°
OAKSALNAMH2560.0°24.9°
OANSALOAONAM120.6°123.0°
OANSALNAMH2415.3°41.5°
OANSALNAMH25135.3°138.5°
OAOSALNAMH2478.5°91.5°
OAOSALNAMH2541.5°88.6°
SALNAMH24H25120.0°180.0°
H1C1C2H26.1°57.6°
H5C5C4H460.4°57.8°
H5C5C6H618.2°65.0°
H5C5C6H62126.4°175.0°
H3ACBIH4AH5A120.0°120.0°
H2C2C3H313.5°56.9°
H3C3O3HO367.4°59.9°
H3C3C4H4164.4°177.2°
H4C4O4HO461.1°60.2°
H61C6O6HO659.2°60.0°
H62C6O6HO659.1°60.0°
H16CACCADH1833.7°54.4°
H16CACCADH19151.5°65.6°
H17CACCADH1885.4°174.9°
H17CACCADH1932.4°54.9°
H18CADCAEH23113.7°178.7°
H19CADCAEH234.0°61.3°
H20CAACAFH2145.2°54.8°
H20CAACAFH22165.0°174.9°
H21CAFCAEH2333.7°61.1°
H21CAFCAAH1473.0°65.6°
H22CAFCAEH23153.5°178.8°
H22CAFCAAH1446.9°54.5°

222415

PDB entries from 2024-07-10

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