Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5KY

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
F1C12sing1.40Å1.33Å
FC12sing1.40Å1.31Å
C12C11sing1.51Å1.50Å
C12F2sing1.40Å1.33Å
C13C11doub1.38Å1.39ÅAromatic
C13C14sing1.39Å1.40ÅAromatic
N2C14sing1.40Å1.38Å
C11C10sing1.38Å1.39ÅAromatic
C14C8doub1.40Å1.41ÅAromatic
C10C9doub1.38Å1.38ÅAromatic
C8C9sing1.39Å1.40ÅAromatic
C8N1sing1.40Å1.42Å
N1C7sing1.35Å1.37Å
O1C5doub1.22Å1.30Å
C7Nsing1.35Å1.37Å
C7O2doub1.22Å1.23Å
C5Osing1.35Å1.23Å
C5C4sing1.47Å1.51Å
NC6sing1.39Å1.42Å
C4C6doub1.40Å1.42ÅAromatic
C4C3sing1.40Å1.40ÅAromatic
C6C15sing1.39Å1.40ÅAromatic
C3C2doub1.38Å1.38ÅAromatic
C15C1doub1.38Å1.39ÅAromatic
C2C1sing1.39Å1.39ÅAromatic
C1Csing1.51Å1.51Å
C3H1sing1.08Å1.08Å
C2H2sing1.08Å1.08Å
CH3sing1.09Å1.10Å
CH4sing1.09Å1.10Å
CH5sing1.09Å1.10Å
C10H6sing1.08Å1.08Å
C9H7sing1.08Å1.08Å
C13H8sing1.08Å1.08Å
N2H9sing0.97Å1.00Å
N2H10sing0.97Å1.00Å
N1H11sing0.97Å1.00Å
NH12sing0.97Å1.00Å
OH13sing0.97Å0.95Å
C15H14sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
F1C12F108.0°109.5°
F1C12C11112.9°109.5°
F1C12F2107.2°109.5°
FC12C11112.5°109.4°
FC12F2102.0°109.5°
C11C12F2113.6°109.5°
C12C11C13120.2°119.9°
C12C11C10120.3°119.9°
C11C13C14120.4°120.0°
C13C11C10119.5°120.2°
C11C13H8119.8°120.0°
C13C14N2120.3°120.1°
C13C14C8119.3°119.8°
C14C13H8119.8°120.0°
N2C14C8120.3°120.1°
C14N2H9109.5°120.0°
C14N2H10109.5°120.0°
C11C10C9121.1°120.2°
C11C10H6119.4°119.9°
C14C8C9119.8°119.8°
C14C8N1118.6°120.1°
C10C9C8120.0°120.0°
C9C10H6119.5°119.9°
C10C9H7120.0°120.0°
C9C8N1121.7°120.1°
C8C9H7120.0°119.9°
C8N1C7126.1°120.0°
C8N1H11116.9°120.0°
N1C7N112.3°120.0°
N1C7O2123.3°120.0°
C7N1H11117.0°120.0°
O1C5O121.5°120.0°
O1C5C4117.6°120.0°
NC7O2124.5°120.1°
C7NC6128.5°120.0°
C7NH12115.7°120.1°
OC5C4120.9°120.0°
C5OH13109.5°117.0°
C5C4C6122.8°120.2°
C5C4C3118.6°120.2°
NC6C4119.7°120.2°
NC6C15121.1°120.2°
C6NH12115.7°120.0°
C6C4C3118.5°119.6°
C4C6C15119.2°119.6°
C4C3C2120.7°119.9°
C4C3H1119.6°120.1°
C6C15C1121.9°120.1°
C6C15H14119.1°119.9°
C3C2C1121.5°120.4°
C2C3H1119.6°120.0°
C3C2H2119.3°119.9°
C15C1C2118.1°120.4°
C15C1C120.9°119.8°
C1C15H14119.0°120.0°
C2C1C121.0°119.8°
C1C2H2119.3°119.8°
C1CH3109.5°109.4°
C1CH4109.5°109.5°
C1CH5109.5°109.5°
H3CH4109.5°109.4°
H3CH5109.5°109.5°
H4CH5109.4°109.5°
H9N2H10109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
F1C12FC11125.2°120.0°
F1C12FF2112.7°120.1°
F1C12C11F2122.3°120.0°
F1C12C11C1317.0°60.3°
F1C12C11C10166.2°120.0°
FC12C11F2115.2°119.9°
FC12C11C13139.5°59.8°
FC12C11C1043.7°120.0°
C12C11C13C10176.9°179.7°
C12C11C13C14175.5°180.0°
C12C11C10C9176.1°179.9°
C12C11C10H64.0°0.0°
C12C11C13H84.5°0.0°
F2C12C11C13105.3°179.7°
F2C12C11C1071.5°0.0°
C11C13C14H8180.0°180.0°
C11C13C14N2177.5°180.0°
C11C13C14C80.6°0.0°
C13C11C10C90.8°0.3°
C13C11C10H6179.2°179.8°
C13C14N2C8178.1°180.0°
C14C13C11C101.3°0.3°
C13C14C8C90.7°0.3°
C13C14C8N1179.3°180.0°
C13C14N2H9180.0°0.0°
C13C14N2H1060.0°180.0°
N2C14C8C9178.8°179.7°
N2C14C8N11.2°0.0°
N2C14C13H82.5°0.0°
C14N2H9H10120.0°180.0°
C11C10C9H6180.0°179.9°
C11C10C9C80.5°0.1°
C11C10C9H7179.5°180.0°
C10C11C13H8178.7°179.7°
C14C8C9C101.3°0.3°
C14C8C9N1180.0°179.7°
C14C8N1C7160.0°145.0°
C14C8C9H7178.7°179.7°
C8C14C13H8179.4°180.0°
C8C14N2H91.9°180.0°
C8C14N2H10118.1°0.0°
C14C8N1H1120.0°35.1°
C10C9C8H7180.0°179.9°
C10C9C8N1178.8°180.0°
C9C8N1C720.0°34.7°
C8C9C10H6179.5°180.0°
C9C8N1H11159.9°145.2°
C8N1C7H11180.0°180.0°
C8N1C7N171.0°175.4°
C8N1C7O28.7°4.6°
N1C8C9H71.2°0.1°
N1C7NO2179.7°179.9°
N1C7NC6176.7°174.6°
N1C7NH123.3°5.5°
O1C5OC4179.0°180.0°
O1C5C4C65.3°4.9°
O1C5C4C3171.9°174.8°
O1C5OH130.0°0.1°
C7NC6H12180.0°179.9°
C7NC6C4152.6°145.1°
C7NC6C1525.1°34.9°
NC7N1H119.0°4.7°
O2C7NC63.0°5.3°
O2C7N1H11171.3°175.4°
O2C7NH12177.0°174.6°
OC5C4C6175.7°175.1°
OC5C4C37.1°5.2°
C5C4C6N7.5°0.3°
C5C4C6C3177.2°179.7°
C5C4C6C15174.8°179.7°
C5C4C3C2176.2°179.7°
C5C4C3H13.8°0.3°
C4C5OH13179.0°180.0°
NC6C4C15177.8°180.0°
NC6C4C3175.3°180.0°
NC6C15C1175.9°180.0°
NC6C15H144.1°0.1°
C6C4C3C21.2°0.0°
C4C6C15C11.8°0.0°
C6C4C3H1178.8°180.0°
C4C6NH1227.4°34.9°
C4C6C15H14178.2°180.0°
C3C4C6C152.4°0.0°
C4C3C2H1180.0°180.0°
C4C3C2C10.8°0.0°
C4C3C2H2179.2°180.0°
C6C15C1H14180.0°180.0°
C6C15C1C20.1°0.0°
C6C15C1C179.3°180.0°
C15C6NH12154.9°145.1°
C3C2C1C151.4°0.0°
C3C2C1H2180.0°180.0°
C3C2C1C178.0°180.0°
C15C1C2C179.4°180.0°
C15C1C2H2178.6°180.0°
C15C1CH389.7°90.0°
C15C1CH4150.3°29.9°
C15C1CH530.3°150.0°
C1C2C3H1179.2°180.0°
C2C1CH389.7°90.0°
C2C1CH430.3°150.1°
C2C1CH5150.3°30.0°
C2C1C15H14179.9°180.0°
CC1C2H22.1°0.0°
C1CH3H4120.0°119.9°
C1CH3H5120.0°120.0°
C1CH4H5120.0°120.1°
CC1C15H140.7°0.1°
H1C3C2H20.8°0.0°
H3CH4H5120.0°120.0°
H6C10C9H70.5°0.1°

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon