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5K3

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O2C1sing1.43Å1.22Å
C1Osing1.43Å1.41Å
C1C2sing1.53Å1.53Å
OCsing1.43Å1.44Å
C2C3sing1.53Å1.55Å
C3C4sing1.51Å1.52Å
C4C9sing1.38Å1.38ÅAromatic
C4C5doub1.38Å1.52ÅAromatic
C9C8doub1.38Å1.52ÅAromatic
C8C7sing1.39Å1.37ÅAromatic
C7O1sing1.36Å1.41Å
C7C6doub1.39Å1.54ÅAromatic
C6C5sing1.38Å1.37ÅAromatic
O2H2sing0.97Å0.95Å
C1H1sing1.09Å1.10Å
C2H21Csing1.09Å1.10Å
C2H22Csing1.09Å1.10Å
CHC1sing1.09Å1.10Å
CHC2sing1.09Å1.10Å
CHC3sing1.09Å1.10Å
C3H31Csing1.09Å1.10Å
C3H32Csing1.09Å1.10Å
C9H9sing1.08Å1.08Å
C5H5sing1.08Å1.08Å
C8H8sing1.08Å1.08Å
O1HAsing0.97Å0.95Å
C6H6sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O2C1O119.0°109.5°
O2C1C2119.7°109.5°
C1O2H2109.5°114.1°
O2C1H198.1°109.5°
OC1C2116.6°109.5°
C1OC114.8°114.0°
OC1H197.0°109.4°
C1C2C3112.2°109.5°
C2C1H196.5°109.4°
C1C2H21C108.8°109.5°
C1C2H22C108.8°109.5°
OCHC1109.5°109.4°
OCHC2109.5°109.5°
OCHC3109.5°109.5°
C2C3C4106.3°109.5°
C3C2H21C108.8°109.5°
C3C2H22C108.8°109.4°
C2C3H31C110.2°109.5°
C2C3H32C110.3°109.5°
C3C4C9120.0°120.0°
C3C4C5119.9°119.9°
C4C3H31C110.3°109.5°
C4C3H32C110.2°109.5°
C9C4C5120.1°120.1°
C4C9C8120.0°120.1°
C4C9H9120.0°120.0°
C4C5C6119.7°120.1°
C4C5H5120.1°119.9°
C9C8C7120.2°119.9°
C8C9H9120.0°119.9°
C9C8H8119.9°120.1°
C8C7O1120.1°120.1°
C8C7C6119.7°119.9°
C7C8H8119.9°120.0°
O1C7C6120.1°120.0°
C7O1HA109.5°114.0°
C7C6C5120.3°119.9°
C7C6H6119.9°120.0°
C6C5H5120.2°120.0°
C5C6H6119.8°120.0°
H21CC2H22C109.4°109.4°
HC1CHC2109.4°109.5°
HC1CHC3109.5°109.5°
HC2CHC3109.4°109.4°
H31CC3H32C109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O2C1OC2155.8°120.0°
O2C1OH1103.3°120.1°
O2C1C2H1103.2°120.1°
O2C1OC13.0°65.0°
O2C1C2C330.5°65.0°
O2C1C2H21C151.0°175.0°
O2C1C2H22C89.9°55.0°
OC1C2H1101.2°119.9°
OC1C2C3173.8°175.0°
OC1O2H2180.0°60.0°
OC1C2H21C53.4°55.0°
OC1C2H22C65.8°65.0°
C1OCHC1180.0°60.1°
C1OCHC260.0°60.0°
C1OCHC360.0°180.0°
C2C1OC168.9°175.0°
C1C2C3H21C120.4°120.1°
C1C2C3H22C120.4°120.0°
C1C2C3C4176.9°179.9°
C2C1O2H224.9°60.0°
C1C2H21CH22C118.7°120.0°
C1C2C3H31C57.4°59.9°
C1C2C3H32C63.6°60.0°
COC1H190.3°55.1°
OCHC1HC2120.0°120.0°
OCHC1HC3120.0°120.0°
OCHC2HC3120.0°120.0°
C2C3C4H31C119.5°120.0°
C2C3C4H32C119.5°120.0°
C2C3C4C998.9°90.0°
C2C3C4C580.4°90.3°
C3C2C1H172.6°55.1°
C3C2H21CH22C118.7°119.9°
C2C3H31CH32C121.5°120.0°
C3C4C9C5179.3°179.7°
C3C4C9C8179.6°180.0°
C3C4C5C6179.6°179.8°
C4C3C2H21C62.7°60.0°
C4C3C2H22C56.4°59.9°
C4C3H31CH32C121.4°120.0°
C3C4C9H90.4°0.0°
C3C4C5H50.4°0.0°
C4C9C8H9180.0°180.0°
C4C9C8C70.2°0.0°
C9C4C5C60.4°0.5°
C9C4C3H31C20.6°30.0°
C9C4C3H32C141.6°150.0°
C9C4C5H5179.6°179.7°
C4C9C8H8179.8°180.0°
C5C4C9C80.3°0.3°
C4C5C6C70.2°0.5°
C4C5C6H5180.0°179.8°
C5C4C3H31C160.1°149.7°
C5C4C3H32C39.1°29.7°
C5C4C9H9179.7°179.7°
C4C5C6H6179.7°179.7°
C9C8C7H8180.0°180.0°
C9C8C7O1180.0°180.0°
C9C8C7C60.0°0.0°
C8C7O1C6180.0°180.0°
C8C7C6C50.1°0.2°
C7C8C9H9179.8°180.0°
C8C7O1HA180.0°90.0°
C8C7C6H6179.9°179.9°
O1C7C6C5179.9°179.8°
O1C7C8H80.0°0.0°
O1C7C6H60.1°0.1°
C7C6C5H6180.0°179.8°
C7C6C5H5179.8°179.8°
C6C7C8H8180.0°180.0°
C6C7O1HA0.0°90.0°
H2O2C1H177.3°180.0°
H1C1C2H21C47.8°64.9°
H1C1C2H22C167.0°175.1°
H21CC2C3H31C177.8°NaN°
H21CC2C3H32C56.8°60.0°
H22CC2C3H31C63.1°60.1°
H22CC2C3H32C175.9°179.9°
HC1CHC2HC3120.0°120.0°
H9C9C8H80.2°0.0°
H5C5C6H60.3°0.1°

248942

PDB entries from 2026-02-11

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