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SummaryGeometryRelated PDB entries

5JX

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
O01C02sing1.36Å1.38Å
C23C02doub1.39Å1.38ÅAromatic
C23C22sing1.38Å1.38ÅAromatic
C02C03sing1.39Å1.37ÅAromatic
C22C05doub1.39Å1.36ÅAromatic
C03C04doub1.38Å1.37ÅAromatic
C05C04sing1.39Å1.40ÅAromatic
C05C06sing1.48Å1.57Å
C06C07sing1.48Å1.57Å
C06C14doub1.34Å1.38Å
C08C07doub1.40Å1.38ÅAromatic
C08C09sing1.38Å1.38ÅAromatic
C07C13sing1.39Å1.38ÅAromatic
C09C10doub1.39Å1.39ÅAromatic
C13C12doub1.38Å1.38ÅAromatic
C10C12sing1.39Å1.38ÅAromatic
C10O11sing1.36Å1.39Å
C15C14sing1.51Å1.51Å
C15C16sing1.53Å1.50Å
C14C21sing1.51Å1.51Å
C16C17sing1.53Å1.50Å
C21C20sing1.53Å1.50Å
C20C17sing1.53Å1.50Å
C17C18sing1.53Å1.49Å
F19C18sing1.40Å1.31Å
O01H1sing0.97Å0.95Å
C03H2sing1.08Å1.08Å
C04H3sing1.08Å1.08Å
C08H5sing1.08Å1.08Å
C09H6sing1.08Å1.08Å
O11H7sing0.97Å0.95Å
C12H8sing1.08Å1.08Å
C13H9sing1.08Å1.08Å
C15H11sing1.09Å1.10Å
C15H12sing1.09Å1.10Å
C16H13sing1.09Å1.10Å
C16H14sing1.09Å1.10Å
C17H15sing1.09Å1.10Å
C18H16sing1.09Å1.10Å
C18H17sing1.09Å1.10Å
C20H18sing1.09Å1.10Å
C20H19sing1.09Å1.10Å
C21H20sing1.09Å1.10Å
C21H21sing1.09Å1.10Å
C22H22sing1.08Å1.08Å
C23H23sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
O01C02C23120.0°120.0°
O01C02C03119.4°119.9°
C02O01H1109.5°114.1°
C02C23C22119.7°120.1°
C23C02C03120.6°120.1°
C02C23H23120.1°119.9°
C23C22C05120.8°119.9°
C23C22H22119.6°120.0°
C22C23H23120.1°120.0°
C02C03C04118.9°120.1°
C02C03H2120.6°119.9°
C22C05C04118.6°119.9°
C22C05C06118.6°120.0°
C05C22H22119.6°120.1°
C03C04C05121.3°119.9°
C04C03H2120.5°120.0°
C03C04H3119.3°120.0°
C04C05C06122.8°120.1°
C05C04H3119.4°120.1°
C05C06C07115.4°120.0°
C05C06C14123.7°120.0°
C07C06C14120.7°120.0°
C06C07C08120.5°120.0°
C06C07C13120.1°120.1°
C06C14C15122.4°120.9°
C06C14C21120.3°120.8°
C07C08C09120.4°119.9°
C08C07C13119.3°119.8°
C07C08H5119.8°120.0°
C08C09C10119.9°120.1°
C09C08H5119.8°120.0°
C08C09H6120.1°119.9°
C07C13C12120.8°120.0°
C07C13H9119.6°120.0°
C09C10C12119.5°120.2°
C09C10O11120.9°119.9°
C10C09H6120.1°120.0°
C13C12C10120.2°120.1°
C13C12H8119.9°120.0°
C12C13H9119.6°120.0°
C12C10O11119.5°119.9°
C10C12H8119.9°119.9°
C10O11H7109.5°114.0°
C14C15C16115.1°108.5°
C15C14C21116.6°118.3°
C14C15H11108.1°109.6°
C14C15H12108.1°109.6°
C15C16C17110.1°109.4°
C16C15H11108.0°109.7°
C16C15H12108.0°109.6°
C15C16H13109.3°109.5°
C15C16H14109.3°109.5°
C14C21C20112.4°108.8°
C14C21H20108.7°109.6°
C14C21H21108.8°109.6°
C16C17C20113.0°109.8°
C16C17C18113.9°109.4°
C17C16H13109.3°109.5°
C17C16H14109.3°109.5°
C16C17H15105.2°109.4°
C21C20C17108.8°109.5°
C21C20H18109.6°109.5°
C21C20H19109.6°109.4°
C20C21H20108.8°109.6°
C20C21H21108.7°109.5°
C20C17C18113.0°109.4°
C20C17H15105.2°109.3°
C17C20H18109.6°109.5°
C17C20H19109.7°109.5°
C17C18F19111.7°109.5°
C18C17H15105.3°109.5°
C17C18H16108.9°109.5°
C17C18H17108.9°109.5°
F19C18H16108.9°109.5°
F19C18H17108.9°109.5°
H11C15H12109.5°109.8°
H13C16H14109.4°109.5°
H16C18H17109.5°109.4°
H18C20H19109.5°109.5°
H20C21H21109.5°109.8°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
O01C02C23C03179.9°179.8°
O01C02C23C22179.5°179.7°
O01C02C03C04179.1°179.9°
O01C02C03H20.9°0.0°
O01C02C23H230.5°0.1°
C02C23C22H23180.0°179.8°
C02C23C22C050.3°0.5°
C23C02C03C040.8°0.3°
C23C02O01H1180.0°90.2°
C23C02C03H2179.2°179.8°
C02C23C22H22179.7°179.8°
C22C23C02C030.3°0.5°
C23C22C05H22180.0°179.7°
C23C22C05C040.7°0.3°
C23C22C05C06179.1°179.7°
C02C03C04H2180.0°179.9°
C02C03C04C051.2°0.1°
C03C02O01H10.2°90.0°
C02C03C04H3178.8°180.0°
C03C02C23H23179.6°179.7°
C22C05C04C031.2°0.1°
C22C05C04C06178.4°180.0°
C22C05C06C0740.5°115.0°
C22C05C06C14145.8°64.9°
C22C05C04H3178.8°180.0°
C05C22C23H23179.7°179.7°
C03C04C05H3180.0°179.9°
C03C04C05C06179.5°179.9°
C04C05C06C07137.9°65.0°
C04C05C06C1435.9°115.1°
C05C04C03H2178.8°180.0°
C04C05C22H22179.3°180.0°
C05C06C07C14173.9°179.9°
C05C06C07C0859.9°115.3°
C05C06C07C13116.5°65.0°
C05C06C14C1520.8°0.2°
C05C06C14C21168.9°180.0°
C06C05C04H30.4°0.0°
C06C05C22H220.9°0.0°
C06C07C08C13176.5°179.7°
C06C07C08C09178.2°180.0°
C06C07C13C12177.9°179.8°
C07C06C14C15165.7°179.7°
C07C06C14C214.5°0.1°
C06C07C08H51.8°0.1°
C06C07C13H92.0°0.0°
C14C06C07C08114.0°64.8°
C14C06C07C1369.5°115.0°
C06C14C15C21170.6°179.8°
C06C14C15C16131.9°128.7°
C06C14C21C20127.6°128.7°
C06C14C15H11107.3°111.6°
C06C14C15H1211.1°9.0°
C06C14C21H207.1°8.9°
C06C14C21H21112.0°111.6°
C07C08C09H5180.0°180.0°
C07C08C09C101.2°0.0°
C08C07C13C121.4°0.5°
C07C08C09H6178.8°180.0°
C08C07C13H9178.5°179.7°
C09C08C07C131.7°0.3°
C08C09C10H6180.0°179.9°
C08C09C10C120.5°0.1°
C08C09C10O11179.4°180.0°
C07C13C12H9180.0°179.8°
C07C13C12C100.7°0.4°
C13C07C08H5178.3°179.8°
C07C13C12H8179.3°179.8°
C09C10C12C130.3°0.2°
C09C10C12O11179.0°179.9°
C10C09C08H5178.8°179.9°
C09C10O11H7180.0°90.0°
C09C10C12H8179.7°180.0°
C13C12C10H8180.0°179.8°
C13C12C10O11179.2°179.7°
C12C10C09H6179.5°180.0°
C12C10O11H71.0°89.9°
C10C12C13H9179.2°179.8°
O11C10C09H60.5°0.1°
O11C10C12H80.8°0.1°
C14C15C16H11120.8°119.7°
C14C15C16H12120.8°119.7°
C14C15C16C1744.0°54.6°
C15C14C21C2043.2°51.0°
C14C15H11H12117.5°120.5°
C14C15C16H13164.1°174.6°
C14C15C16H1476.1°65.3°
C15C14C21H20163.7°170.8°
C15C14C21H2177.2°68.6°
C16C15C14C2138.7°51.1°
C15C16C17H13120.1°120.0°
C15C16C17H14120.1°120.0°
C15C16C17C2057.4°63.6°
C15C16C17C18171.7°176.3°
C16C15H11H12117.4°120.5°
C15C16H13H14119.7°120.0°
C15C16C17H1556.8°56.4°
C14C21C20H20120.4°119.8°
C14C21C20H21120.5°119.7°
C14C21C20C1753.4°54.4°
C21C14C15H1182.1°68.7°
C21C14C15H12159.5°170.8°
C14C21C20H1866.5°174.5°
C14C21C20H19173.3°65.6°
C14C21H20H21118.7°120.4°
C16C17C20C2162.6°63.5°
C16C17C20C18131.3°120.1°
C16C17C20H15114.3°120.1°
C16C17C18H15114.8°119.9°
C16C17C18F1971.1°60.0°
C17C16C15H1176.8°65.1°
C17C16C15H12164.8°174.3°
C17C16H13H14119.7°120.0°
C16C17C18H16168.5°60.0°
C16C17C18H1749.2°180.0°
C16C17C20H1857.3°176.4°
C16C17C20H19177.5°56.4°
C21C20C17H18119.9°120.1°
C21C20C17H19119.9°119.9°
C21C20C17C18166.1°176.4°
C21C20C17H1551.6°56.6°
C21C20H18H19120.3°119.9°
C20C21H20H21118.7°120.3°
C20C17C18H15114.4°119.8°
C20C17C18F1959.7°179.6°
C20C17C16H13177.5°176.4°
C20C17C16H1462.7°56.3°
C20C17C18H1660.6°60.3°
C20C17C18H17179.9°59.7°
C17C20H18H19120.3°120.0°
C17C20C21H20173.8°174.2°
C17C20C21H2167.1°65.3°
C17C18F19H16120.3°120.0°
C17C18F19H17120.3°120.0°
C18C17C16H1351.6°56.3°
C18C17C16H1468.2°63.7°
C17C18H16H17119.0°120.0°
C18C17C20H1874.0°56.3°
C18C17C20H1946.2°63.7°
F19C18C17H15174.1°59.8°
F19C18H16H17119.0°120.0°
H2C03C04H31.2°0.1°
H5C08C09H61.2°0.0°
H8C12C13H90.8°0.0°
H11C15C16H1343.3°54.9°
H11C15C16H14163.0°175.0°
H12C15C16H1375.1°65.7°
H12C15C16H1444.7°54.4°
H13C16C17H1563.3°63.6°
H14C16C17H15176.9°176.4°
H15C17C18H1653.7°179.9°
H15C17C18H1765.6°60.1°
H15C17C20H18171.5°63.5°
H15C17C20H1968.3°176.5°
H18C20C21H2053.9°65.7°
H18C20C21H21173.0°54.7°
H19C20C21H2066.3°54.2°
H19C20C21H2152.8°174.7°
H22C22C23H230.3°0.1°

222926

PDB entries from 2024-07-24

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