5HY
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O | C | doub | 1.21Å | 1.23Å | |
| C | CA | sing | 1.52Å | 1.52Å | |
| C | NAF | sing | 1.35Å | 1.33Å | |
| CA | N | sing | 1.47Å | 1.47Å | |
| N | CAI | sing | 1.35Å | 1.34Å | |
| N | HN | sing | 0.97Å | 1.00Å | |
| CA | CB | sing | 1.53Å | 1.54Å | |
| CA | HA | sing | 1.09Å | 1.10Å | |
| CB | CG | sing | 1.51Å | 1.54Å | |
| CB | HB | sing | 1.09Å | 1.10Å | |
| CB | HBA | sing | 1.09Å | 1.10Å | |
| CG | OD2 | doub | 1.21Å | 1.25Å | |
| CG | OD1 | sing | 1.34Å | 1.25Å | |
| CAI | OAB | doub | 1.22Å | 1.23Å | |
| NAF | CAI | sing | 1.34Å | 1.34Å | |
| NAF | HNAF | sing | 0.97Å | 1.00Å | |
| OD1 | HOD1 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O | C | CA | 125.6° | 127.1° |
| O | C | NAF | 125.2° | 127.1° |
| CA | C | NAF | 109.2° | 105.8° |
| C | CA | N | 100.6° | 103.6° |
| C | CA | CB | 112.8° | 110.6° |
| C | CA | HA | 114.1° | 110.6° |
| C | NAF | CAI | 108.7° | 111.6° |
| C | NAF | HNAF | 125.6° | 124.2° |
| CA | N | CAI | 107.8° | 106.6° |
| CA | N | HN | 126.1° | 126.7° |
| N | CA | CB | 112.3° | 110.6° |
| N | CA | HA | 114.7° | 110.6° |
| CAI | N | HN | 126.1° | 126.7° |
| N | CAI | OAB | 123.2° | 123.8° |
| N | CAI | NAF | 113.6° | 112.5° |
| CB | CA | HA | 102.8° | 110.7° |
| CA | CB | CG | 116.3° | 109.5° |
| CA | CB | HB | 107.3° | 109.4° |
| CA | CB | HBA | 107.3° | 109.4° |
| CG | CB | HB | 107.2° | 109.5° |
| CG | CB | HBA | 107.3° | 109.5° |
| CB | CG | OD2 | 118.7° | 120.0° |
| CB | CG | OD1 | 116.1° | 120.0° |
| HB | CB | HBA | 111.6° | 109.5° |
| OD2 | CG | OD1 | 125.2° | 120.0° |
| CG | OD1 | HOD1 | 109.5° | 117.0° |
| OAB | CAI | NAF | 123.2° | 123.7° |
| CAI | NAF | HNAF | 125.7° | 124.2° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O | C | CA | NAF | 178.6° | 179.7° |
| O | C | CA | N | 179.2° | 179.7° |
| O | C | CA | CB | 59.4° | 61.2° |
| O | C | CA | HA | 57.5° | 61.8° |
| O | C | NAF | CAI | 179.7° | 179.7° |
| O | C | NAF | HNAF | 0.3° | 0.3° |
| C | CA | N | CB | 120.2° | 118.6° |
| C | CA | N | HA | 122.9° | 118.5° |
| C | CA | N | CAI | 2.5° | 0.0° |
| C | CA | N | HN | 177.5° | 179.9° |
| C | CA | CB | HA | 123.4° | 122.9° |
| C | CA | CB | CG | 48.3° | 175.0° |
| C | CA | CB | HB | 168.3° | 55.0° |
| C | CA | CB | HBA | 71.7° | 65.0° |
| CA | C | NAF | CAI | 1.0° | 0.0° |
| CA | C | NAF | HNAF | 179.0° | 180.0° |
| NAF | C | CA | N | 2.2° | 0.0° |
| C | NAF | CAI | N | 0.7° | 0.0° |
| NAF | C | CA | CB | 122.0° | 118.5° |
| NAF | C | CA | HA | 121.1° | 118.5° |
| C | NAF | CAI | OAB | 179.7° | 180.0° |
| C | NAF | CAI | HNAF | 180.0° | 180.0° |
| CA | N | CAI | HN | 180.0° | 179.9° |
| N | CA | CB | HA | 123.8° | 122.9° |
| N | CA | CB | CG | 64.5° | 70.8° |
| N | CA | CB | HB | 55.5° | 169.2° |
| N | CA | CB | HBA | 175.5° | 49.2° |
| CA | N | CAI | OAB | 178.8° | 180.0° |
| CA | N | CAI | NAF | 2.2° | 0.0° |
| CAI | N | CA | CB | 122.7° | 118.5° |
| CAI | N | CA | HA | 120.4° | 118.5° |
| N | CAI | OAB | NAF | 178.9° | 179.9° |
| N | CAI | NAF | HNAF | 179.3° | 180.0° |
| HN | N | CA | CB | 57.3° | 61.5° |
| HN | N | CA | HA | 59.6° | 61.4° |
| HN | N | CAI | OAB | 1.2° | 0.1° |
| HN | N | CAI | NAF | 177.8° | 179.9° |
| CA | CB | CG | HB | 120.0° | 119.9° |
| CA | CB | CG | HBA | 120.0° | 120.0° |
| CA | CB | HB | HBA | 117.2° | 119.9° |
| CA | CB | CG | OD2 | 12.1° | 0.0° |
| CA | CB | CG | OD1 | 168.8° | 180.0° |
| HA | CA | CB | CG | 171.7° | 52.1° |
| HA | CA | CB | HB | 68.3° | 67.9° |
| HA | CA | CB | HBA | 51.7° | 172.1° |
| CG | CB | HB | HBA | 117.2° | 120.1° |
| CB | CG | OD2 | OD1 | 179.0° | 180.0° |
| CB | CG | OD1 | HOD1 | 179.0° | 180.0° |
| HB | CB | CG | OD2 | 132.1° | 120.0° |
| HB | CB | CG | OD1 | 48.8° | 60.1° |
| HBA | CB | CG | OD2 | 107.9° | 119.9° |
| HBA | CB | CG | OD1 | 71.2° | 60.0° |
| OD2 | CG | OD1 | HOD1 | 0.0° | 0.0° |
| OAB | CAI | NAF | HNAF | 0.3° | 0.1° |
