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5GU

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
OCdoub1.21Å1.23Å
CCAsing1.51Å1.40Å
CNAHsing1.35Å1.39Å
CANsing1.47Å1.48Å
NAHCALsing1.40Å1.39Å
NCAKsing1.40Å1.40Å
CALCAKdoub1.40Å1.39ÅAromatic
CALCAEsing1.39Å1.38ÅAromatic
CAKCADsing1.38Å1.39ÅAromatic
CAECAJdoub1.38Å1.38ÅAromatic
CADCACdoub1.38Å1.39ÅAromatic
CAJCACsing1.38Å1.39ÅAromatic
CAJBRsing1.89Å1.87Å
CAH1sing1.09Å1.10Å
CAH2sing1.09Å1.10Å
NH3sing0.97Å1.00Å
CADH4sing1.08Å1.08Å
CACH5sing1.08Å1.08Å
CAEH6sing1.08Å1.08Å
NAHH7sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OCCA120.4°119.6°
OCNAH118.3°119.6°
CACNAH121.3°120.8°
CCAN114.1°109.0°
CCAH1108.3°109.6°
CCAH2108.3°109.6°
CNAHCAL120.8°120.7°
CNAHH7119.6°119.6°
CANCAK119.8°117.9°
NCAH1108.3°109.5°
NCAH2108.3°109.6°
CANH3106.8°121.0°
NAHCALCAK119.9°119.5°
NAHCALCAE119.5°120.8°
CALNAHH7119.6°119.7°
NCAKCAL119.2°118.7°
NCAKCAD120.5°121.1°
CAKNH3106.9°121.1°
CAKCALCAE120.6°119.7°
CALCAKCAD120.2°120.2°
CALCAECAJ119.3°119.9°
CALCAEH6120.3°120.1°
CAKCADCAC119.3°119.7°
CAKCADH4120.3°120.2°
CAECAJCAC120.5°120.3°
CAECAJBR118.7°119.9°
CAJCAEH6120.3°120.1°
CADCACCAJ120.1°120.2°
CACCADH4120.4°120.1°
CADCACH5120.0°119.9°
CACCAJBR120.9°119.8°
CAJCACH5119.9°119.9°
H1CAH2109.5°109.6°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OCCANAH177.9°179.6°
OCCAN162.5°150.9°
OCNAHCAL178.7°177.8°
OCCAH141.8°89.3°
OCCAH276.9°31.0°
OCNAHH71.3°2.5°
CCANH1120.7°119.9°
CCANH2120.7°119.9°
CACNAHCAL3.4°1.8°
CCANCAK26.2°42.0°
CCAH1H2117.9°120.2°
CCANH395.3°138.0°
CACNAHH7176.6°177.9°
NAHCCAN19.6°28.8°
CNAHCALH7180.0°179.7°
CNAHCALCAK8.2°14.8°
CNAHCALCAE173.2°165.8°
NAHCCAH1140.3°91.1°
NAHCCAH2101.0°148.6°
CANCAKH3121.4°180.0°
CANCAKCAL16.2°29.2°
CANCAKCAD163.2°150.7°
NCAH1H2117.9°120.2°
NAHCALCAKN1.3°0.9°
NAHCALCAKCAE178.6°179.4°
NAHCALCAKCAD179.3°179.1°
NAHCALCAECAJ179.5°179.2°
NAHCALCAEH60.5°0.8°
NCAKCALCAD179.4°179.9°
NCAKCALCAE179.9°179.7°
NCAKCADCAC179.4°179.8°
CAKNCAH1146.9°77.9°
CAKNCAH294.5°161.9°
NCAKCADH40.6°0.2°
CAKCALCAECAJ0.9°0.2°
CALCAKCADCAC0.0°0.2°
CALCAKNH3105.3°150.8°
CALCAKCADH4179.9°179.9°
CAKCALCAEH6179.1°179.8°
CAKCALNAHH7171.8°165.5°
CAECALCAKCAD0.7°0.3°
CALCAECAJH6180.0°179.9°
CALCAECAJCAC0.4°0.0°
CALCAECAJBR179.5°180.0°
CAECALNAHH76.8°13.9°
CAKCADCACH4180.0°180.0°
CAKCADCACCAJ0.4°0.0°
CADCAKNH375.4°29.3°
CAKCADCACH5179.6°180.0°
CAECAJCACCAD0.3°0.1°
CAECAJCACBR179.9°180.0°
CAECAJCACH5179.8°179.9°
CADCACCAJH5180.0°180.0°
CADCACCAJBR179.9°179.9°
CAJCACCADH4179.6°180.0°
CACCAJCAEH6179.6°179.9°
BRCAJCACH50.1°0.1°
BRCAJCAEH60.5°0.1°
H1CANH325.4°102.1°
H2CANH3144.0°18.1°
H4CADCACH50.4°0.0°

222415

PDB entries from 2024-07-10

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