5GG
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
NY | CJ | sing | 1.47Å | 1.48Å | |
CJ | CI | sing | 1.53Å | 1.53Å | |
CI | CH | sing | 1.53Å | 1.53Å | |
CH | CF | sing | 1.53Å | 1.53Å | |
CF | NZ | sing | 1.47Å | 1.48Å | |
NZ | CE | sing | 1.47Å | 1.49Å | |
CE | CD | sing | 1.53Å | 1.53Å | |
CD | CG | sing | 1.53Å | 1.53Å | |
CG | CB | sing | 1.53Å | 1.53Å | |
CB | CA | sing | 1.53Å | 1.53Å | |
CA | C | sing | 1.51Å | 1.52Å | |
CA | N | sing | 1.47Å | 1.49Å | |
C | O | doub | 1.21Å | 1.22Å | |
C | OXT | sing | 1.34Å | 1.33Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | H5 | sing | 1.09Å | 1.10Å | |
CB | H6 | sing | 1.09Å | 1.10Å | |
CG | H7 | sing | 1.09Å | 1.10Å | |
CG | H8 | sing | 1.09Å | 1.10Å | |
CD | H9 | sing | 1.09Å | 1.10Å | |
CD | H10 | sing | 1.09Å | 1.10Å | |
CE | H11 | sing | 1.09Å | 1.10Å | |
CE | H12 | sing | 1.09Å | 1.10Å | |
NZ | H13 | sing | 1.01Å | 1.00Å | |
CH | H15 | sing | 1.09Å | 1.10Å | |
CH | H16 | sing | 1.09Å | 1.10Å | |
CI | H17 | sing | 1.09Å | 1.10Å | |
CI | H18 | sing | 1.09Å | 1.10Å | |
CJ | H19 | sing | 1.09Å | 1.10Å | |
CJ | H20 | sing | 1.09Å | 1.10Å | |
CF | H21 | sing | 1.09Å | 1.10Å | |
CF | H22 | sing | 1.09Å | 1.10Å | |
NY | H23 | sing | 1.01Å | 1.00Å | |
NY | H24 | sing | 1.01Å | 1.00Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
NY | CJ | CI | 109.8° | 109.5° |
NY | CJ | H19 | 109.4° | 109.5° |
NY | CJ | H20 | 109.4° | 109.5° |
CJ | NY | H23 | 109.5° | 111.1° |
CJ | NY | H24 | 109.5° | 111.0° |
CJ | CI | CH | 109.4° | 109.5° |
CJ | CI | H17 | 109.5° | 109.4° |
CJ | CI | H18 | 109.5° | 109.5° |
CI | CJ | H19 | 109.4° | 109.4° |
CI | CJ | H20 | 109.4° | 109.5° |
CI | CH | CF | 113.4° | 109.4° |
CI | CH | H15 | 108.5° | 109.5° |
CI | CH | H16 | 108.5° | 109.4° |
CH | CI | H17 | 109.5° | 109.5° |
CH | CI | H18 | 109.5° | 109.5° |
CH | CF | NZ | 109.5° | 109.5° |
CF | CH | H15 | 108.5° | 109.5° |
CF | CH | H16 | 108.5° | 109.5° |
CH | CF | H21 | 109.5° | 109.5° |
CH | CF | H22 | 109.5° | 109.5° |
CF | NZ | CE | 111.3° | 111.0° |
CF | NZ | H13 | 109.0° | 111.0° |
NZ | CF | H21 | 109.5° | 109.5° |
NZ | CF | H22 | 109.5° | 109.5° |
NZ | CE | CD | 107.9° | 109.5° |
NZ | CE | H11 | 109.9° | 109.5° |
NZ | CE | H12 | 109.9° | 109.5° |
CE | NZ | H13 | 109.0° | 111.0° |
CE | CD | CG | 113.9° | 109.5° |
CE | CD | H9 | 108.3° | 109.4° |
CE | CD | H10 | 108.4° | 109.5° |
CD | CE | H11 | 109.8° | 109.4° |
CD | CE | H12 | 109.8° | 109.4° |
CD | CG | CB | 109.1° | 109.4° |
CD | CG | H7 | 109.6° | 109.5° |
CD | CG | H8 | 109.6° | 109.5° |
CG | CD | H9 | 108.4° | 109.5° |
CG | CD | H10 | 108.3° | 109.5° |
CG | CB | CA | 112.7° | 109.5° |
CG | CB | H5 | 108.6° | 109.5° |
CG | CB | H6 | 108.7° | 109.4° |
CB | CG | H7 | 109.6° | 109.4° |
CB | CG | H8 | 109.6° | 109.4° |
CB | CA | C | 111.0° | 109.5° |
CB | CA | N | 109.4° | 109.4° |
CB | CA | HA | 109.1° | 109.4° |
CA | CB | H5 | 108.7° | 109.5° |
CA | CB | H6 | 108.6° | 109.5° |
C | CA | N | 108.4° | 109.5° |
CA | C | O | 120.2° | 120.0° |
CA | C | OXT | 117.4° | 120.1° |
C | CA | HA | 109.2° | 109.5° |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.5° | 111.0° |
N | CA | HA | 109.7° | 109.4° |
O | C | OXT | 122.5° | 120.0° |
C | OXT | HXT | 109.5° | 117.0° |
H | N | H2 | 109.5° | 111.0° |
H5 | CB | H6 | 109.5° | 109.5° |
H7 | CG | H8 | 109.5° | 109.5° |
H9 | CD | H10 | 109.5° | 109.4° |
H11 | CE | H12 | 109.5° | 109.5° |
H15 | CH | H16 | 109.4° | 109.5° |
H17 | CI | H18 | 109.5° | 109.5° |
H19 | CJ | H20 | 109.5° | 109.5° |
H21 | CF | H22 | 109.5° | 109.5° |
H23 | NY | H24 | 109.4° | 111.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
NY | CJ | CI | H19 | 120.1° | 120.0° |
NY | CJ | CI | H20 | 120.1° | 120.0° |
NY | CJ | CI | CH | 157.7° | 180.0° |
NY | CJ | CI | H17 | 82.3° | 60.0° |
NY | CJ | CI | H18 | 37.8° | 60.0° |
NY | CJ | H19 | H20 | 119.8° | 120.1° |
CJ | NY | H23 | H24 | 120.0° | 123.9° |
CJ | CI | CH | H17 | 120.0° | 119.9° |
CJ | CI | CH | H18 | 120.0° | 120.0° |
CJ | CI | CH | CF | 157.6° | 179.9° |
CJ | CI | CH | H15 | 37.0° | 60.0° |
CJ | CI | CH | H16 | 81.8° | 60.0° |
CJ | CI | H17 | H18 | 120.0° | 120.0° |
CI | CJ | H19 | H20 | 119.8° | 120.0° |
CI | CJ | NY | H23 | 180.0° | 56.0° |
CI | CJ | NY | H24 | 60.0° | 180.0° |
CI | CH | CF | H15 | 120.6° | 120.0° |
CI | CH | CF | H16 | 120.6° | 120.0° |
CI | CH | CF | NZ | 179.4° | 180.0° |
CI | CH | H15 | H16 | 118.2° | 120.0° |
CH | CI | H17 | H18 | 120.0° | 120.0° |
CH | CI | CJ | H19 | 37.7° | 60.0° |
CH | CI | CJ | H20 | 82.2° | 60.0° |
CI | CH | CF | H21 | 59.4° | 60.0° |
CI | CH | CF | H22 | 60.6° | 60.0° |
CH | CF | NZ | H21 | 120.0° | 120.0° |
CH | CF | NZ | H22 | 120.0° | 120.0° |
CH | CF | NZ | CE | 172.8° | 180.0° |
CH | CF | NZ | H13 | 52.6° | 56.1° |
CF | CH | H15 | H16 | 118.2° | 120.0° |
CF | CH | CI | H17 | 82.4° | 60.0° |
CF | CH | CI | H18 | 37.7° | 60.0° |
CH | CF | H21 | H22 | 120.0° | 120.0° |
CF | NZ | CE | H13 | 120.3° | 123.9° |
CF | NZ | CE | CD | 174.5° | 180.0° |
CF | NZ | CE | H11 | 65.8° | 60.0° |
CF | NZ | CE | H12 | 54.7° | 60.0° |
NZ | CF | CH | H15 | 60.0° | 60.0° |
NZ | CF | CH | H16 | 58.8° | 60.0° |
NZ | CF | H21 | H22 | 120.0° | 120.0° |
NZ | CE | CD | H11 | 119.7° | 120.1° |
NZ | CE | CD | H12 | 119.7° | 120.0° |
NZ | CE | CD | CG | 179.8° | 180.0° |
NZ | CE | CD | H9 | 59.5° | 59.9° |
NZ | CE | CD | H10 | 59.2° | 60.0° |
NZ | CE | H11 | H12 | 120.7° | 120.0° |
CE | NZ | CF | H21 | 67.2° | 60.0° |
CE | NZ | CF | H22 | 52.8° | 60.0° |
CE | CD | CG | H9 | 120.7° | 120.0° |
CE | CD | CG | H10 | 120.7° | 120.0° |
CE | CD | CG | CB | 170.7° | 180.0° |
CE | CD | CG | H7 | 69.4° | 60.1° |
CE | CD | CG | H8 | 50.7° | 60.0° |
CE | CD | H9 | H10 | 118.0° | 119.9° |
CD | CE | H11 | H12 | 120.7° | 119.9° |
CD | CE | NZ | H13 | 54.2° | 56.1° |
CD | CG | CB | H7 | 119.9° | 120.0° |
CD | CG | CB | H8 | 119.9° | 120.0° |
CD | CG | CB | CA | 166.6° | 180.0° |
CD | CG | CB | H5 | 72.9° | 60.0° |
CD | CG | CB | H6 | 46.2° | 60.0° |
CD | CG | H7 | H8 | 120.2° | 120.1° |
CG | CD | H9 | H10 | 118.0° | 120.1° |
CG | CD | CE | H11 | 60.1° | 60.0° |
CG | CD | CE | H12 | 60.4° | 60.0° |
CG | CB | CA | H5 | 120.5° | 120.1° |
CG | CB | CA | H6 | 120.5° | 119.9° |
CG | CB | CA | C | 172.9° | 174.9° |
CG | CB | CA | N | 67.5° | 65.0° |
CG | CB | CA | HA | 52.5° | 54.9° |
CG | CB | H5 | H6 | 118.5° | 120.0° |
CB | CG | H7 | H8 | 120.2° | 120.0° |
CB | CG | CD | H9 | 50.0° | 60.0° |
CB | CG | CD | H10 | 68.7° | 60.0° |
CB | CA | C | N | 120.2° | 120.0° |
CB | CA | C | HA | 120.3° | 120.0° |
CB | CA | N | HA | 119.7° | 119.9° |
CB | CA | C | O | 75.1° | 100.0° |
CB | CA | C | OXT | 104.9° | 80.0° |
CB | CA | N | H | 180.0° | 60.0° |
CB | CA | N | H2 | 60.0° | 64.0° |
CA | CB | H5 | H6 | 118.5° | 120.0° |
CA | CB | CG | H7 | 46.7° | 60.0° |
CA | CB | CG | H8 | 73.4° | 60.0° |
C | CA | N | HA | 119.2° | 120.1° |
CA | C | O | OXT | 180.0° | 180.0° |
C | CA | N | H | 58.9° | 60.0° |
C | CA | N | H2 | 61.2° | 176.0° |
C | CA | CB | H5 | 52.4° | 65.0° |
C | CA | CB | H6 | 66.6° | 55.0° |
CA | C | OXT | HXT | 180.0° | 180.0° |
N | CA | C | O | 45.1° | 20.0° |
N | CA | C | OXT | 134.9° | 160.0° |
CA | N | H | H2 | 120.0° | 124.0° |
N | CA | CB | H5 | 172.0° | 55.0° |
N | CA | CB | H6 | 53.0° | 175.0° |
O | C | CA | HA | 164.6° | 140.0° |
O | C | OXT | HXT | 0.0° | 0.0° |
OXT | C | CA | HA | 15.4° | 40.0° |
H | N | CA | HA | 60.3° | 179.9° |
H2 | N | CA | HA | 179.6° | 56.0° |
HA | CA | CB | H5 | 67.9° | 175.0° |
HA | CA | CB | H6 | 173.0° | 65.0° |
H5 | CB | CG | H7 | 167.2° | 180.0° |
H5 | CB | CG | H8 | 47.0° | 60.0° |
H6 | CB | CG | H7 | 73.8° | 60.0° |
H6 | CB | CG | H8 | 166.1° | 180.0° |
H7 | CG | CD | H9 | 169.9° | 180.0° |
H7 | CG | CD | H10 | 51.3° | 60.0° |
H8 | CG | CD | H9 | 69.9° | 59.9° |
H8 | CG | CD | H10 | 171.4° | 179.9° |
H9 | CD | CE | H11 | 179.3° | 180.0° |
H9 | CD | CE | H12 | 60.2° | 60.0° |
H10 | CD | CE | H11 | 60.6° | 60.1° |
H10 | CD | CE | H12 | 178.9° | 180.0° |
H11 | CE | NZ | H13 | 173.9° | 63.9° |
H12 | CE | NZ | H13 | 65.5° | 176.0° |
H13 | NZ | CF | H21 | 172.6° | 63.9° |
H13 | NZ | CF | H22 | 67.4° | 176.0° |
H15 | CH | CI | H17 | 157.0° | 60.0° |
H15 | CH | CI | H18 | 82.9° | 180.0° |
H15 | CH | CF | H21 | 180.0° | 60.0° |
H15 | CH | CF | H22 | 60.0° | 180.0° |
H16 | CH | CI | H17 | 38.2° | 180.0° |
H16 | CH | CI | H18 | 158.3° | 60.0° |
H16 | CH | CF | H21 | 61.2° | 180.0° |
H16 | CH | CF | H22 | 178.8° | 60.0° |
H17 | CI | CJ | H19 | 157.7° | 180.0° |
H17 | CI | CJ | H20 | 37.8° | 60.0° |
H18 | CI | CJ | H19 | 82.3° | 60.0° |
H18 | CI | CJ | H20 | 157.8° | 180.0° |
H19 | CJ | NY | H23 | 59.9° | 63.9° |
H19 | CJ | NY | H24 | 60.0° | 60.1° |
H20 | CJ | NY | H23 | 60.0° | 176.1° |
H20 | CJ | NY | H24 | 179.9° | 60.0° |