Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5FY

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C25C26doub1.38Å1.41ÅAromatic
C25C24sing1.39Å1.41ÅAromatic
C26C21sing1.39Å1.41ÅAromatic
O07C24sing1.36Å1.36Å
C24C23doub1.39Å1.40ÅAromatic
C21O06sing1.36Å1.37Å
C21C22doub1.39Å1.41ÅAromatic
O06S02sing1.52Å1.54Å
C23C22sing1.38Å1.41ÅAromatic
O04S02doub1.42Å1.53Å
S02O05doub1.42Å1.52Å
S02C20sing1.81Å1.94Å
C20C19sing1.53Å1.55Å
C20C17sing1.57Å1.53Å
C19C18sing1.57Å1.54Å
C17C09sing1.54Å1.36Å
C17S01sing1.86Å1.93Å
O03S01doub1.42Å1.53Å
C09C10sing1.47Å1.36Å
C09C08doub1.34Å1.37Å
C16C15sing1.51Å1.41Å
S01C18sing1.86Å1.94Å
C10C15doub1.40Å1.43ÅAromatic
C10C11sing1.40Å1.42ÅAromatic
C15C14sing1.38Å1.41ÅAromatic
C11C12doub1.38Å1.41ÅAromatic
C18C08sing1.54Å1.36Å
C14C13doub1.39Å1.41ÅAromatic
C12C13sing1.39Å1.40ÅAromatic
C13O02sing1.36Å1.35Å
C08C07sing1.47Å1.36Å
C01C02sing1.51Å1.40Å
C07C02doub1.40Å1.44ÅAromatic
C07C06sing1.40Å1.42ÅAromatic
C02C03sing1.38Å1.41ÅAromatic
C06C05doub1.38Å1.40ÅAromatic
C03C04doub1.39Å1.40ÅAromatic
C05C04sing1.39Å1.42ÅAromatic
C04O01sing1.36Å1.36Å
C01H1sing1.09Å1.10Å
C01H2sing1.09Å1.10Å
C01H3sing1.09Å1.10Å
C03H4sing1.08Å1.08Å
O01H5sing0.97Å0.95Å
C05H6sing1.08Å1.08Å
C06H7sing1.08Å1.08Å
C11H10sing1.08Å1.08Å
C12H11sing1.08Å1.08Å
O02H12sing0.97Å0.95Å
C14H13sing1.08Å1.08Å
C16H14sing1.09Å1.10Å
C16H15sing1.09Å1.10Å
C16H16sing1.09Å1.10Å
C17H17sing1.09Å1.10Å
C18H19sing1.09Å1.10Å
C19H20sing1.09Å1.10Å
C19H21sing1.09Å1.10Å
C20H22sing1.09Å1.10Å
C22H23sing1.08Å1.08Å
C23H24sing1.08Å1.08Å
O07H25sing0.97Å0.95Å
C25H26sing1.08Å1.08Å
C26H27sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C26C25C24118.7°120.0°
C25C26C21119.3°120.0°
C26C25H26120.7°119.9°
C25C26H27120.3°120.1°
C25C24O07118.9°120.0°
C25C24C23122.4°120.0°
C24C25H26120.7°120.0°
C26C21O06118.9°120.0°
C26C21C22121.4°120.0°
C21C26H27120.4°120.0°
O07C24C23118.7°120.0°
C24O07H25109.5°114.0°
C24C23C22119.0°120.0°
C24C23H24120.5°120.0°
O06C21C22119.6°120.0°
C21O06S02118.4°114.0°
C21C22C23119.2°120.0°
C21C22H23120.4°120.0°
O06S02O04111.2°104.3°
O06S02O05109.5°104.3°
O06S02C20109.8°104.5°
C23C22H23120.4°120.0°
C22C23H24120.5°120.0°
O04S02O05109.2°121.0°
O04S02C20108.1°110.5°
O05S02C20108.9°110.5°
S02C20C19113.5°109.7°
S02C20C17114.1°109.8°
S02C20H22104.9°109.7°
C19C20C17106.3°108.4°
C20C19C18105.1°108.2°
C20C19H20110.5°109.7°
C20C19H21110.5°109.8°
C19C20H22108.8°109.7°
C20C17C09111.4°100.8°
C20C17S0196.6°99.4°
C20C17H17115.1°118.5°
C17C20H22109.0°109.6°
C19C18S0198.7°99.4°
C19C18C08111.6°101.1°
C19C18H19115.1°118.5°
C18C19H20110.5°109.8°
C18C19H21110.5°109.7°
C09C17S01102.0°98.6°
C17C09C10121.2°123.8°
C17C09C08111.6°112.4°
C09C17H17118.7°117.8°
C17S01O03109.5°109.5°
C17S01C1876.0°85.2°
S01C17H17109.8°118.0°
O03S01C18108.4°109.4°
C10C09C08126.8°123.8°
C09C10C15125.0°120.1°
C09C10C11116.3°120.1°
C09C08C18112.0°112.5°
C09C08C07124.0°123.8°
C16C15C10124.8°120.0°
C16C15C14114.4°120.1°
C15C16H14109.5°109.5°
C15C16H15109.5°109.5°
C15C16H16109.5°109.5°
S01C18C0899.9°98.4°
S01C18H19109.7°118.0°
C15C10C11118.6°119.8°
C10C15C14120.8°119.9°
C10C11C12120.5°119.9°
C10C11H10119.7°120.0°
C15C14C13119.0°120.1°
C15C14H13120.5°120.0°
C11C12C13119.8°120.1°
C12C11H10119.7°120.1°
C11C12H11120.1°119.9°
C18C08C07121.3°123.7°
C08C18H19118.7°117.7°
C14C13C12121.2°120.2°
C14C13O02119.9°119.9°
C13C14H13120.5°119.9°
C12C13O02118.9°119.9°
C13C12H11120.1°119.9°
C13O02H12109.5°114.1°
C08C07C02123.7°120.1°
C08C07C06117.0°120.1°
C01C02C07124.5°120.0°
C01C02C03115.6°120.1°
C02C01H1109.5°109.5°
C02C01H2109.5°109.5°
C02C01H3109.4°109.5°
C02C07C06119.4°119.8°
C07C02C03119.9°119.9°
C07C06C05120.3°119.9°
C07C06H7119.8°120.0°
C02C03C04119.3°120.1°
C02C03H4120.4°119.9°
C06C05C04119.6°120.1°
C06C05H6120.2°119.9°
C05C06H7119.9°120.1°
C03C04C05121.5°120.2°
C03C04O01119.1°119.9°
C04C03H4120.3°119.9°
C05C04O01119.4°119.9°
C04C05H6120.2°120.0°
C04O01H5109.5°114.0°
H1C01H2109.4°109.5°
H1C01H3109.5°109.4°
H2C01H3109.5°109.4°
H14C16H15109.5°109.4°
H14C16H16109.5°109.5°
H15C16H16109.5°109.5°
H20C19H21109.5°109.7°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C26C25C24H26180.0°179.5°
C25C26C21H27180.0°179.5°
C26C25C24O07179.9°179.8°
C26C25C24C230.0°0.2°
C25C26C21O06179.2°179.7°
C25C26C21C220.6°0.5°
C24C25C26C210.2°0.5°
C25C24O07C23180.0°180.0°
C25C24C23C220.0°0.1°
C25C24C23H24180.0°179.9°
C25C24O07H25180.0°90.0°
C24C25C26H27179.8°180.0°
C26C21O06C22178.6°179.7°
C26C21O06S02117.8°90.3°
C26C21C22C230.6°0.3°
C26C21C22H23179.4°179.7°
C21C26C25H26179.8°180.0°
O07C24C23C22180.0°180.0°
O07C24C23H240.0°0.0°
O07C24C25H260.1°0.2°
C24C23C22C210.3°0.0°
C24C23C22H24180.0°180.0°
C24C23C22H23179.6°180.0°
C23C24O07H250.0°90.0°
C23C24C25H26179.9°179.7°
O06C21C22C23179.2°180.0°
C21O06S02O04180.0°41.1°
C21O06S02O0559.2°168.9°
C21O06S02C2060.4°75.0°
O06C21C22H230.8°0.0°
O06C21C26H270.9°0.2°
C22C21O06S0263.6°90.0°
C21C22C23H23180.0°180.0°
C21C22C23H24179.6°180.0°
C22C21C26H27179.5°180.0°
O06S02O04O05121.0°116.8°
O06S02O04C20120.6°111.8°
O06S02O05C20120.2°111.8°
O06S02C20C19133.8°75.0°
O06S02C20C17104.2°165.9°
O06S02C20H2215.1°45.5°
O04S02O05C20117.8°131.4°
O04S02C20C1912.3°173.3°
O04S02C20C17134.3°54.3°
O04S02C20H22106.4°66.1°
O05S02C20C19106.3°36.7°
O05S02C20C1715.7°82.4°
O05S02C20H22135.0°157.2°
S02C20C19C17126.3°119.9°
S02C20C19H22116.4°120.5°
S02C20C17H22116.9°120.5°
S02C20C19C18130.5°119.8°
S02C20C17C0970.5°58.0°
S02C20C17S01176.1°158.7°
S02C20C17H1768.4°72.1°
S02C20C19H20110.2°0.1°
S02C20C19H2111.2°120.5°
C19C20C17H22117.2°119.7°
C20C19C18H20119.3°119.7°
C20C19C18H21119.3°119.8°
C19C20C17C0955.4°61.8°
C19C20C17S0150.2°38.9°
C20C19C18S0143.5°39.0°
C20C19C18C0860.8°61.6°
C19C20C17H17165.7°168.0°
C20C19C18H19160.1°168.2°
C20C19H20H21122.0°120.6°
C17C20C19C184.3°0.1°
C20C17C09S01102.1°101.4°
C20C17C09H17137.3°130.6°
C20C17S01H17119.7°129.5°
C20C17S01O0341.2°54.8°
C20C17C09C10122.2°115.1°
C20C17C09C0864.3°64.9°
C20C17S01C1863.8°54.1°
C17C20C19H20123.6°119.8°
C17C20C19H21115.0°119.6°
C19C18S01C1762.3°54.2°
C19C18S01O0343.9°54.8°
C19C18C08C0959.1°64.6°
C19C18S01C08113.8°102.8°
C19C18S01H19120.7°129.5°
C19C18C08H19137.4°130.8°
C19C18C08C07138.6°115.1°
C18C19H20H21122.0°120.6°
C18C19C20H22113.1°119.7°
C09C17S01H17126.7°127.9°
C09C17S01O03154.7°157.4°
C17C09C10C08172.4°180.0°
C09C17S01C1849.8°48.5°
C17C09C10C15135.5°105.0°
C17C09C10C1144.7°74.7°
C17C09C08C184.9°0.3°
C17C09C08C07156.8°180.0°
C09C17C20H22172.6°178.5°
C17S01O03C1881.2°91.8°
S01C17C09C10135.8°143.5°
S01C17C09C0837.7°36.5°
C17S01C18C0851.6°48.5°
C17S01C18H19177.0°176.2°
S01C17C20H2266.9°80.8°
O03S01C18C08157.8°157.5°
O03S01C17H1778.5°74.7°
O03S01C18H1976.8°74.8°
C09C10C15C160.3°0.0°
C09C10C15C11179.8°179.7°
C09C10C15C14179.9°179.8°
C09C10C11C12179.9°180.0°
C10C09C08C18177.9°179.7°
C10C09C08C0716.2°0.0°
C09C10C11H100.1°0.1°
C10C09C17H1715.1°15.5°
C09C08C18S0144.4°36.8°
C08C09C10C1552.1°75.1°
C08C09C10C11127.7°105.3°
C09C08C18C07162.3°179.7°
C09C08C07C02140.9°108.8°
C09C08C07C0639.1°71.0°
C08C09C17H17158.4°164.5°
C09C08C18H19163.5°164.7°
C16C15C10C14179.6°179.8°
C16C15C10C11180.0°179.7°
C16C15C14C13179.8°179.7°
C16C15C14H130.2°0.1°
C15C16H14H15120.0°120.0°
C15C16H14H16120.0°120.0°
C15C16H15H16120.0°120.0°
S01C18C08H19119.0°127.9°
S01C18C08C07117.9°143.5°
C18S01C17H17176.5°176.4°
S01C18C19H2075.8°158.6°
S01C18C19H21162.8°80.8°
C15C10C11C120.3°0.3°
C10C15C14C130.1°0.5°
C15C10C11H10179.7°179.7°
C10C15C14H13179.9°179.7°
C10C15C16H1489.8°95.9°
C10C15C16H15150.2°144.1°
C10C15C16H1630.2°24.1°
C11C10C15C140.3°0.6°
C10C11C12H10180.0°179.9°
C10C11C12C130.0°0.0°
C10C11C12H11180.0°179.9°
C15C14C13H13180.0°179.8°
C15C14C13C120.2°0.2°
C15C14C13O02179.9°179.7°
C14C15C16H1489.9°83.8°
C14C15C16H1530.2°36.1°
C14C15C16H16150.1°156.2°
C11C12C13C140.2°0.1°
C11C12C13H11180.0°179.9°
C11C12C13O02179.8°180.0°
C18C08C07C0259.0°71.5°
C18C08C07C06121.0°108.7°
C08C18C19H20179.9°58.1°
C08C18C19H2158.5°178.6°
C14C13C12O02179.9°179.9°
C14C13C12H11179.8°180.0°
C14C13O02H12180.0°89.9°
C13C12C11H10180.0°179.9°
C12C13O02H120.0°89.9°
C12C13C14H13179.8°180.0°
O02C13C12H110.1°0.2°
O02C13C14H130.1°0.1°
C08C07C02C010.4°0.0°
C08C07C02C06179.9°179.7°
C08C07C02C03179.8°179.8°
C08C07C06C05179.9°179.8°
C08C07C06H70.1°0.0°
C07C08C18H191.2°15.6°
C01C02C07C03179.4°179.8°
C01C02C07C06179.7°179.8°
C01C02C03C04179.9°180.0°
C02C01H1H2120.0°120.1°
C02C01H1H3120.0°120.0°
C02C01H2H3120.0°120.0°
C01C02C03H40.1°0.1°
C02C07C06C050.1°0.5°
C07C02C03C040.4°0.2°
C07C02C01H190.3°97.2°
C07C02C01H2149.7°22.8°
C07C02C01H329.7°142.8°
C07C02C03H4179.6°179.7°
C02C07C06H7179.9°179.7°
C06C07C02C030.2°0.5°
C07C06C05H7180.0°179.8°
C07C06C05C040.2°0.3°
C07C06C05H6179.8°179.8°
C02C03C04H4180.0°179.9°
C02C03C04C050.3°0.0°
C02C03C04O01179.9°180.0°
C03C02C01H190.2°83.0°
C03C02C01H229.8°156.9°
C03C02C01H3149.8°37.0°
C06C05C04C030.0°0.0°
C06C05C04H6180.0°179.9°
C06C05C04O01179.9°180.0°
C03C04C05O01179.9°180.0°
C03C04O01H5180.0°90.0°
C03C04C05H6180.0°179.9°
C05C04C03H4179.7°179.9°
C05C04O01H50.1°90.0°
C04C05C06H7179.8°180.0°
O01C04C03H40.1°0.1°
O01C04C05H60.1°0.1°
H1C01H2H3120.0°119.9°
H6C05C06H70.2°0.0°
H10C11C12H110.0°0.0°
H14C16H15H16120.0°120.0°
H17C17C20H2248.5°48.3°
H19C18C19H2040.8°72.2°
H19C18C19H2180.6°48.4°
H20C19C20H226.2°120.6°
H21C19C20H22127.6°0.0°
H23C22C23H240.4°0.1°
H26C25C26H270.2°0.5°

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon