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Summary Geometry Related PDB entries

5FX

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C1	O1	sing	1.43Å	1.41Å
C1	C2	sing	1.51Å	1.55Å
C2	O2	doub	1.21Å	1.21Å
C2	C3	sing	1.51Å	1.53Å
C3	O3	sing	1.43Å	1.42Å
C3	C4	sing	1.53Å	1.54Å
C4	O4	sing	1.43Å	1.43Å
C4	C5	sing	1.53Å	1.53Å
C5	F	sing	1.40Å	1.41Å
C1	H11C	sing	1.09Å	1.10Å
C1	H12C	sing	1.09Å	1.10Å
O1	H1	sing	0.97Å	0.95Å
C3	H3	sing	1.09Å	1.10Å
O3	HA	sing	0.97Å	0.95Å
C4	H4	sing	1.09Å	1.10Å
O4	HB	sing	0.97Å	0.95Å
C5	H51C	sing	1.09Å	1.10Å
C5	H52C	sing	1.09Å	1.10Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O1	C1	C2	110.5°	109.5°
O1	C1	H11C	109.2°	109.5°
O1	C1	H12C	109.2°	109.5°
C1	O1	H1	109.5°	114.1°
C1	C2	O2	121.9°	120.0°
C1	C2	C3	118.0°	120.0°
C2	C1	H11C	109.2°	109.5°
C2	C1	H12C	109.2°	109.5°
O2	C2	C3	120.1°	120.0°
C2	C3	O3	114.2°	109.4°
C2	C3	C4	110.6°	109.5°
C2	C3	H3	105.3°	109.5°
O3	C3	C4	114.0°	109.5°
O3	C3	H3	106.6°	109.5°
C3	O3	HA	109.5°	114.0°
C3	C4	O4	110.8°	109.5°
C3	C4	C5	111.8°	109.4°
C4	C3	H3	105.2°	109.5°
C3	C4	H4	107.7°	109.5°
O4	C4	C5	109.5°	109.5°
O4	C4	H4	109.1°	109.5°
C4	O4	HB	109.5°	114.0°
C4	C5	F	103.9°	109.5°
C5	C4	H4	107.8°	109.5°
C4	C5	H51C	110.8°	109.5°
C4	C5	H52C	110.8°	109.5°
F	C5	H51C	110.8°	109.5°
F	C5	H52C	110.8°	109.4°
H11C	C1	H12C	109.4°	109.4°
H51C	C5	H52C	109.5°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O1	C1	C2	H11C	120.2°	120.0°
O1	C1	C2	H12C	120.2°	120.1°
O1	C1	C2	O2	7.7°	0.0°
O1	C1	C2	C3	174.5°	180.0°
O1	C1	H11C	H12C	119.5°	120.0°
C1	C2	O2	C3	177.8°	180.0°
C1	C2	C3	O3	10.8°	165.0°
C1	C2	C3	C4	119.4°	75.0°
C2	C1	H11C	H12C	119.5°	120.0°
C2	C1	O1	H1	3.3°	180.0°
C1	C2	C3	H3	127.4°	45.0°
O2	C2	C3	O3	171.3°	15.0°
O2	C2	C3	C4	58.5°	105.0°
O2	C2	C1	H11C	127.8°	120.1°
O2	C2	C1	H12C	112.5°	120.0°
O2	C2	C3	H3	54.7°	134.9°
C2	C3	O3	C4	128.5°	120.0°
C2	C3	O3	H3	115.9°	120.0°
C2	C3	C4	H3	113.3°	120.0°
C2	C3	C4	O4	65.8°	55.0°
C2	C3	C4	C5	171.7°	175.0°
C3	C2	C1	H11C	54.3°	60.0°
C3	C2	C1	H12C	65.3°	59.9°
C2	C3	O3	HA	180.0°	60.0°
C2	C3	C4	H4	53.4°	65.0°
O3	C3	C4	H3	116.4°	120.0°
O3	C3	C4	O4	64.5°	65.0°
O3	C3	C4	C5	58.0°	55.0°
O3	C3	C4	H4	176.3°	175.0°
C3	C4	O4	C5	123.8°	120.0°
C3	C4	O4	H4	118.4°	120.0°
C3	C4	C5	H4	118.2°	120.0°
C3	C4	C5	F	169.1°	175.0°
C4	C3	O3	HA	51.5°	60.0°
C3	C4	O4	HB	180.0°	60.0°
C3	C4	C5	H51C	50.0°	55.0°
C3	C4	C5	H52C	71.7°	65.0°
O4	C4	C5	H4	118.6°	120.0°
O4	C4	C5	F	67.6°	65.0°
O4	C4	C3	H3	179.1°	175.0°
O4	C4	C5	H51C	173.3°	175.0°
O4	C4	C5	H52C	51.5°	55.0°
C4	C5	F	H51C	119.1°	120.0°
C4	C5	F	H52C	119.1°	120.0°
C5	C4	C3	H3	58.4°	65.0°
C5	C4	O4	HB	56.1°	60.0°
C4	C5	H51C	H52C	122.6°	120.0°
F	C5	C4	H4	51.0°	55.0°
F	C5	H51C	H52C	122.6°	120.0°
H11C	C1	O1	H1	123.5°	60.0°
H12C	C1	O1	H1	116.9°	59.9°
H3	C3	O3	HA	64.1°	179.9°
H3	C3	C4	H4	59.9°	55.0°
H4	C4	O4	HB	61.7°	180.0°
H4	C4	C5	H51C	68.1°	65.0°
H4	C4	C5	H52C	170.1°	175.0°

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