5FA

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
N9	C8	sing	1.36Å	1.38Å	Aromatic
N9	C4	sing	1.37Å	1.32Å	Aromatic
N9	C1'	sing	1.47Å	1.49Å
C8	N7	doub	1.30Å	1.28Å	Aromatic
C8	H8	sing	1.08Å	1.10Å
N7	C5	sing	1.35Å	1.33Å	Aromatic
C5	C6	sing	1.41Å	1.39Å	Aromatic
C5	C4	doub	1.41Å	1.39Å	Aromatic
C6	N6	sing	1.38Å	1.33Å
C6	N1	doub	1.33Å	1.37Å	Aromatic
N6	H61	sing	0.97Å	1.02Å
N6	H62	sing	0.97Å	1.02Å
N1	C2	sing	1.32Å	1.39Å	Aromatic
C2	N3	doub	1.32Å	1.34Å	Aromatic
C2	H2	sing	1.08Å	1.10Å
N3	C4	sing	1.33Å	1.39Å	Aromatic
O5'	C5'	sing	1.43Å	1.40Å
O5'	PA	sing	1.61Å	1.59Å
C5'	C4'	sing	1.53Å	1.50Å
C5'	H5'1	sing	1.09Å	1.12Å
C5'	H5'2	sing	1.09Å	1.12Å
C4'	O4'	sing	1.45Å	1.44Å
C4'	C3'	sing	1.54Å	1.52Å
C4'	H4'	sing	1.09Å	1.12Å
O4'	C1'	sing	1.44Å	1.45Å
C3'	O3'	sing	1.43Å	1.43Å
C3'	C2'	sing	1.55Å	1.51Å
C3'	H3'	sing	1.09Å	1.12Å
O3'	H3T	sing	0.97Å	0.95Å
C2'	O2'	sing	1.43Å	1.40Å
C2'	C1'	sing	1.54Å	1.52Å
C2'	H2'	sing	1.09Å	1.12Å
O2'	HO'2	sing	0.97Å	0.95Å
C1'	H1'	sing	1.09Å	1.11Å
PA	O1A	doub	1.48Å	1.39Å
PA	O2A	sing	1.61Å	1.51Å
PA	O3A	sing	1.61Å	1.47Å
O2A	H2A	sing	0.97Å	0.95Å
O3A	PB	sing	1.61Å	1.57Å
PB	O1B	doub	1.48Å	1.45Å
PB	O2B	sing	1.61Å	1.50Å
PB	O3B	sing	1.61Å	1.50Å
O2B	H2B	sing	0.97Å	0.95Å
O3B	PG	sing	1.61Å	1.58Å
PG	O2G	doub	1.48Å	1.51Å
PG	O1G	sing	1.61Å	1.53Å
PG	O3G	sing	1.61Å	1.61Å
O1G	H1G	sing	0.97Å	0.95Å
O3G	PD	sing	1.61Å	1.47Å
PD	O1D	doub	1.48Å	1.49Å
PD	O2D	sing	1.61Å	1.59Å
PD	O3D	sing	1.61Å	1.60Å
O2D	H2D	sing	0.97Å	0.95Å
O3D	PE	sing	1.61Å	1.60Å
PE	O1E	doub	1.48Å	1.53Å
PE	O2E	sing	1.61Å	1.56Å
PE	O3E	sing	1.61Å	1.66Å
O2E	H2E	sing	0.97Å	0.95Å
O3E	H3E	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C8	N9	C4	108.4°	107.5°
C8	N9	C1'	125.0°	126.3°
N9	C8	N7	107.5°	110.0°
N9	C8	H8	129.0°	125.1°
C4	N9	C1'	126.6°	126.3°
N9	C4	C5	106.9°	106.0°
N9	C4	N3	129.7°	134.9°
N9	C1'	O4'	108.8°	110.4°
N9	C1'	C2'	119.3°	110.4°
N9	C1'	H1'	101.4°	110.3°
N7	C8	H8	123.5°	125.0°
C8	N7	C5	110.9°	109.4°
N7	C5	C6	136.4°	134.7°
N7	C5	C4	106.3°	107.1°
C6	C5	C4	117.3°	118.2°
C5	C6	N6	126.1°	120.7°
C5	C6	N1	118.7°	118.4°
C5	C4	N3	123.3°	119.1°
N6	C6	N1	115.3°	120.8°
C6	N6	H61	126.1°	119.9°
C6	N6	H62	106.3°	120.0°
C6	N1	C2	122.4°	121.2°
H61	N6	H62	106.4°	120.0°
N1	C2	N3	120.0°	122.4°
N1	C2	H2	121.7°	118.7°
N3	C2	H2	118.3°	118.8°
C2	N3	C4	118.3°	120.7°
C5'	O5'	PA	116.6°	106.8°
O5'	C5'	C4'	108.9°	109.5°
O5'	C5'	H5'1	112.4°	109.5°
O5'	C5'	H5'2	112.4°	109.5°
O5'	PA	O1A	108.0°	109.5°
O5'	PA	O2A	115.3°	109.4°
O5'	PA	O3A	105.9°	109.5°
C4'	C5'	H5'1	112.5°	109.5°
C4'	C5'	H5'2	112.4°	109.5°
C5'	C4'	O4'	117.1°	110.4°
C5'	C4'	C3'	113.7°	110.5°
C5'	C4'	H4'	99.4°	110.3°
H5'1	C5'	H5'2	97.9°	109.5°
O4'	C4'	C3'	105.6°	104.8°
O4'	C4'	H4'	108.7°	110.4°
C4'	O4'	C1'	112.1°	105.3°
C3'	C4'	H4'	112.3°	110.4°
C4'	C3'	O3'	108.6°	110.5°
C4'	C3'	C2'	103.1°	104.1°
C4'	C3'	H3'	115.9°	110.5°
O4'	C1'	C2'	103.6°	104.9°
O4'	C1'	H1'	117.6°	110.4°
O3'	C3'	C2'	114.2°	110.5°
O3'	C3'	H3'	105.0°	110.4°
C3'	O3'	H3T	108.6°	106.8°
C2'	C3'	H3'	110.4°	110.6°
C3'	C2'	O2'	111.7°	110.5°
C3'	C2'	C1'	104.4°	104.0°
C3'	C2'	H2'	111.7°	110.5°
O2'	C2'	C1'	110.6°	110.8°
O2'	C2'	H2'	105.7°	110.4°
C2'	O2'	HO'2	111.7°	106.8°
C1'	C2'	H2'	112.9°	110.4°
C2'	C1'	H1'	106.8°	110.4°
O1A	PA	O2A	110.6°	109.5°
O1A	PA	O3A	93.8°	109.5°
O2A	PA	O3A	120.7°	109.5°
PA	O2A	H2A	115.3°	106.8°
PA	O3A	PB	152.8°	106.8°
O3A	PB	O1B	94.0°	109.4°
O3A	PB	O2B	121.0°	109.5°
O3A	PB	O3B	100.3°	109.5°
O1B	PB	O2B	109.1°	109.5°
O1B	PB	O3B	104.7°	109.5°
O2B	PB	O3B	123.0°	109.5°
PB	O2B	H2B	121.0°	106.8°
PB	O3B	PG	132.6°	106.8°
O3B	PG	O2G	112.7°	109.5°
O3B	PG	O1G	110.1°	109.5°
O3B	PG	O3G	96.4°	109.5°
O2G	PG	O1G	112.3°	109.5°
O2G	PG	O3G	118.8°	109.5°
O1G	PG	O3G	105.3°	109.5°
PG	O1G	H1G	110.1°	106.8°
PG	O3G	PD	141.4°	106.8°
O3G	PD	O1D	106.2°	109.5°
O3G	PD	O2D	114.0°	109.4°
O3G	PD	O3D	106.2°	109.5°
O1D	PD	O2D	113.6°	109.5°
O1D	PD	O3D	110.4°	109.5°
O2D	PD	O3D	106.3°	109.5°
PD	O2D	H2D	114.0°	106.8°
PD	O3D	PE	127.9°	106.8°
O3D	PE	O1E	104.6°	109.5°
O3D	PE	O2E	111.2°	109.5°
O3D	PE	O3E	105.2°	109.4°
O1E	PE	O2E	113.5°	109.5°
O1E	PE	O3E	106.8°	109.4°
O2E	PE	O3E	114.7°	109.5°
PE	O2E	H2E	111.2°	106.8°
PE	O3E	H3E	105.2°	106.8°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C8	N9	C4	C1'	178.9°	180.0°
N9	C8	N7	H8	180.0°	180.0°
N9	C8	N7	C5	0.2°	0.3°
C8	N9	C4	C5	0.2°	0.3°
C8	N9	C4	N3	179.5°	179.9°
C8	N9	C1'	O4'	54.0°	22.0°
C8	N9	C1'	C2'	64.5°	93.5°
C8	N9	C1'	H1'	178.7°	144.2°
C4	N9	C8	N7	0.0°	0.0°
C4	N9	C8	H8	180.0°	180.0°
N9	C4	C5	N7	0.3°	0.4°
N9	C4	C5	C6	179.4°	179.7°
N9	C4	C5	N3	179.4°	179.9°
N9	C4	N3	C2	178.8°	180.0°
C4	N9	C1'	O4'	127.2°	157.9°
C4	N9	C1'	C2'	114.3°	86.5°
C4	N9	C1'	H1'	2.5°	35.7°
C1'	N9	C8	N7	179.0°	180.0°
C1'	N9	C8	H8	1.0°	0.0°
C1'	N9	C4	C5	178.8°	179.8°
C1'	N9	C4	N3	0.5°	0.0°
N9	C1'	O4'	C4'	114.2°	159.4°
N9	C1'	O4'	C2'	127.9°	118.9°
N9	C1'	O4'	H1'	114.5°	122.2°
N9	C1'	C2'	C3'	92.0°	142.7°
N9	C1'	C2'	O2'	147.7°	98.5°
N9	C1'	C2'	H1'	114.0°	122.2°
N9	C1'	C2'	H2'	29.5°	24.2°
C8	N7	C5	C6	179.2°	179.5°
C8	N7	C5	C4	0.4°	0.4°
H8	C8	N7	C5	179.7°	179.8°
N7	C5	C6	C4	179.5°	179.0°
N7	C5	C6	N6	0.8°	0.7°
N7	C5	C6	N1	179.2°	179.5°
N7	C5	C4	N3	179.7°	179.7°
C5	C6	N6	N1	178.4°	179.8°
C5	C6	N6	H61	180.0°	179.8°
C5	C6	N6	H62	54.7°	0.6°
C5	C6	N1	C2	0.4°	0.3°
C6	C5	C4	N3	0.0°	0.5°
C4	C5	C6	N6	178.8°	179.7°
C4	C5	C6	N1	0.4°	0.5°
C5	C4	N3	C2	0.4°	0.2°
C6	N6	H61	H62	125.2°	179.7°
N6	C6	N1	C2	178.9°	179.9°
N1	C6	N6	H61	1.5°	0.0°
N1	C6	N6	H62	123.7°	179.7°
C6	N1	C2	N3	0.0°	0.0°
C6	N1	C2	H2	180.0°	180.0°
N1	C2	N3	H2	180.0°	180.0°
N1	C2	N3	C4	0.3°	0.0°
H2	C2	N3	C4	179.7°	180.0°
O5'	C5'	C4'	H5'1	125.3°	120.0°
O5'	C5'	C4'	H5'2	125.3°	120.0°
O5'	C5'	H5'1	H5'2	118.3°	120.0°
O5'	C5'	C4'	O4'	61.7°	66.5°
O5'	C5'	C4'	C3'	174.5°	178.1°
O5'	C5'	C4'	H4'	54.9°	55.8°
C5'	O5'	PA	O1A	151.3°	55.0°
C5'	O5'	PA	O2A	27.1°	65.0°
C5'	O5'	PA	O3A	109.2°	175.0°
PA	O5'	C5'	C4'	143.1°	180.0°
PA	O5'	C5'	H5'1	17.8°	60.0°
PA	O5'	C5'	H5'2	91.6°	60.0°
O5'	PA	O1A	O2A	127.0°	120.0°
O5'	PA	O1A	O3A	108.1°	120.0°
O5'	PA	O2A	O3A	129.3°	120.0°
O5'	PA	O2A	H2A	180.0°	60.0°
O5'	PA	O3A	PB	45.7°	160.0°
C4'	C5'	H5'1	H5'2	118.3°	120.0°
C5'	C4'	O4'	C3'	127.8°	118.9°
C5'	C4'	O4'	H4'	111.5°	122.2°
C5'	C4'	C3'	H4'	111.9°	122.3°
C5'	C4'	O4'	C1'	135.1°	159.4°
C5'	C4'	C3'	O3'	83.5°	98.4°
C5'	C4'	C3'	C2'	155.0°	143.0°
C5'	C4'	C3'	H3'	34.3°	24.2°
H5'1	C5'	C4'	O4'	63.6°	173.5°
H5'1	C5'	C4'	C3'	60.2°	58.1°
H5'1	C5'	C4'	H4'	179.8°	64.2°
H5'2	C5'	C4'	O4'	173.0°	53.5°
H5'2	C5'	C4'	C3'	49.2°	61.9°
H5'2	C5'	C4'	H4'	70.3°	175.8°
O4'	C4'	C3'	H4'	118.3°	118.8°
O4'	C4'	C3'	O3'	146.7°	142.8°
O4'	C4'	C3'	C2'	25.2°	24.1°
O4'	C4'	C3'	H3'	95.4°	94.7°
C4'	O4'	C1'	C2'	13.6°	40.4°
C4'	O4'	C1'	H1'	131.2°	78.4°
C3'	C4'	O4'	C1'	7.3°	40.5°
C4'	C3'	O3'	C2'	114.4°	114.7°
C4'	C3'	O3'	H3'	124.5°	122.6°
C4'	C3'	C2'	H3'	124.3°	118.7°
C4'	C3'	O3'	H3T	180.0°	180.0°
C4'	C3'	C2'	O2'	86.2°	118.8°
C4'	C3'	C2'	C1'	33.4°	0.2°
C4'	C3'	C2'	H2'	155.7°	118.7°
H4'	C4'	O4'	C1'	113.4°	78.3°
H4'	C4'	C3'	O3'	28.4°	24.0°
H4'	C4'	C3'	C2'	93.1°	94.7°
H4'	C4'	C3'	H3'	146.3°	146.5°
O4'	C1'	C2'	C3'	29.1°	23.8°
O4'	C1'	C2'	O2'	91.2°	142.6°
O4'	C1'	C2'	H1'	124.9°	118.9°
O4'	C1'	C2'	H2'	150.6°	94.7°
O3'	C3'	C2'	H3'	118.1°	122.7°
O3'	C3'	C2'	O2'	31.4°	0.1°
O3'	C3'	C2'	C1'	150.9°	118.9°
O3'	C3'	C2'	H2'	86.7°	122.7°
C2'	C3'	O3'	H3T	65.6°	65.3°
C3'	C2'	O2'	C1'	115.8°	114.7°
C3'	C2'	O2'	H2'	121.7°	122.6°
C3'	C2'	C1'	H2'	121.6°	118.5°
C3'	C2'	O2'	HO'2	180.0°	61.5°
C3'	C2'	C1'	H1'	154.0°	95.1°
H3'	C3'	O3'	H3T	55.5°	57.5°
H3'	C3'	C2'	O2'	149.5°	122.5°
H3'	C3'	C2'	C1'	91.0°	118.5°
H3'	C3'	C2'	H2'	31.3°	0.0°
O2'	C2'	C1'	H2'	118.2°	122.7°
O2'	C2'	C1'	H1'	33.7°	23.7°
C1'	C2'	O2'	HO'2	64.2°	176.2°
H2'	C2'	O2'	HO'2	58.3°	61.1°
H2'	C2'	C1'	H1'	84.5°	146.4°
O1A	PA	O2A	O3A	107.8°	120.0°
O1A	PA	O2A	H2A	57.2°	180.0°
O1A	PA	O3A	PB	155.6°	40.0°
O2A	PA	O3A	PB	87.6°	80.0°
O3A	PA	O2A	H2A	50.6°	60.0°
PA	O3A	PB	O1B	109.1°	40.0°
PA	O3A	PB	O2B	6.0°	80.0°
PA	O3A	PB	O3B	145.1°	160.0°
O3A	PB	O1B	O2B	124.8°	120.0°
O3A	PB	O1B	O3B	101.8°	120.0°
O3A	PB	O2B	O3B	129.8°	120.0°
O3A	PB	O2B	H2B	180.0°	60.0°
O3A	PB	O3B	PG	88.1°	165.0°
O1B	PB	O2B	O3B	123.0°	120.0°
O1B	PB	O2B	H2B	72.9°	180.0°
O1B	PB	O3B	PG	174.9°	45.0°
O2B	PB	O3B	PG	49.9°	75.0°
O3B	PB	O2B	H2B	50.1°	60.0°
PB	O3B	PG	O2G	123.3°	45.0°
PB	O3B	PG	O1G	3.0°	75.0°
PB	O3B	PG	O3G	111.8°	165.0°
O3B	PG	O2G	O1G	125.1°	120.0°
O3B	PG	O2G	O3G	111.6°	120.0°
O3B	PG	O1G	O3G	102.9°	120.0°
O3B	PG	O1G	H1G	180.0°	60.0°
O3B	PG	O3G	PD	175.3°	160.0°
O2G	PG	O1G	O3G	130.6°	120.0°
O2G	PG	O1G	H1G	53.5°	180.0°
O2G	PG	O3G	PD	55.0°	40.0°
O1G	PG	O3G	PD	71.8°	80.0°
O3G	PG	O1G	H1G	77.1°	60.0°
PG	O3G	PD	O1D	56.9°	40.0°
PG	O3G	PD	O2D	68.9°	80.0°
PG	O3G	PD	O3D	174.4°	160.0°
O3G	PD	O1D	O2D	126.1°	120.0°
O3G	PD	O1D	O3D	114.7°	120.0°
O3G	PD	O2D	O3D	116.7°	120.0°
O3G	PD	O2D	H2D	180.0°	60.0°
O3G	PD	O3D	PE	78.4°	165.0°
O1D	PD	O2D	O3D	121.5°	120.0°
O1D	PD	O2D	H2D	58.2°	180.0°
O1D	PD	O3D	PE	167.0°	45.0°
O2D	PD	O3D	PE	43.4°	75.0°
O3D	PD	O2D	H2D	63.3°	60.0°
PD	O3D	PE	O1E	179.1°	45.0°
PD	O3D	PE	O2E	56.2°	165.0°
PD	O3D	PE	O3E	68.5°	75.0°
O3D	PE	O1E	O2E	121.4°	120.1°
O3D	PE	O1E	O3E	111.2°	120.0°
O3D	PE	O2E	O3E	119.2°	120.0°
O3D	PE	O2E	H2E	180.0°	180.0°
O3D	PE	O3E	H3E	180.0°	60.0°
O1E	PE	O2E	O3E	123.2°	120.0°
O1E	PE	O2E	H2E	62.3°	60.0°
O1E	PE	O3E	H3E	69.2°	180.0°
O2E	PE	O3E	H3E	57.5°	60.0°
O3E	PE	O2E	H2E	60.9°	60.0°

Definition date:	2004-03-10
Last modified:	2011-06-04
Release status:	REL
Processing site:	RCSB
Derived from:	1VC8