Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5EB

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C24C21sing1.53Å1.54Å
C24C27sing1.53Å1.51Å
C21C27sing1.53Å1.52Å
C27C23sing1.53Å1.51Å
C23C22sing1.53Å1.49Å
C6C7doub1.38Å1.38ÅAromatic
C6C5sing1.38Å1.38ÅAromatic
C7C8sing1.38Å1.37ÅAromatic
O21C20doub1.21Å1.22Å
C22C20sing1.51Å1.50Å
C5C4doub1.38Å1.36ÅAromatic
C20N2sing1.35Å1.26Å
C8C9doub1.38Å1.40ÅAromatic
C4C9sing1.38Å1.41ÅAromatic
C4C3sing1.51Å1.50Å
N2C2sing1.47Å1.45Å
C2C3sing1.53Å1.52Å
C2C17sing1.51Å1.47Å
O1C13doub1.21Å1.22Å
NC17sing1.35Å1.26Å
NC10sing1.46Å1.45Å
C17O4doub1.21Å1.22Å
C12C13sing1.51Å1.50Å
C12C11sing1.53Å1.51Å
C12C26sing1.55Å1.52Å
C13N1sing1.34Å1.32Å
N1C25sing1.47Å1.46Å
C11C10sing1.53Å1.52Å
C26C25sing1.55Å1.53Å
C10C14sing1.51Å1.50Å
C14C15doub1.33Å1.47Å
C15C16sing1.47Å1.47Å
O2C16sing1.35Å1.41Å
O2C18sing1.45Å1.46Å
C16O3doub1.22Å1.20Å
C18C19sing1.53Å1.54Å
C2H1sing1.09Å1.10Å
C3H2sing1.09Å1.10Å
C3H3sing1.09Å1.10Å
C5H4sing1.08Å1.08Å
C6H5sing1.08Å1.08Å
C7H6sing1.08Å1.08Å
N2H7sing0.97Å1.00Å
C8H8sing1.08Å1.08Å
C22H9sing1.09Å1.10Å
C22H10sing1.09Å1.10Å
C23H11sing1.09Å1.10Å
C23H12sing1.09Å1.10Å
C27H13sing1.09Å1.10Å
C21H14sing1.09Å1.10Å
C21H15sing1.09Å1.10Å
C24H16sing1.09Å1.10Å
C24H17sing1.09Å1.10Å
C9H18sing1.08Å1.08Å
NH19sing0.97Å1.00Å
C10H20sing1.09Å1.10Å
C14H21sing1.08Å1.08Å
C15H23sing1.08Å1.08Å
C18H25sing1.09Å1.10Å
C18H26sing1.09Å1.10Å
C19H27sing1.09Å1.10Å
C19H28sing1.09Å1.10Å
C19H29sing1.09Å1.10Å
C11H30sing1.09Å1.10Å
C11H31sing1.09Å1.10Å
C12H32sing1.09Å1.10Å
C26H33sing1.09Å1.10Å
C26H34sing1.09Å1.10Å
C25H35sing1.09Å1.10Å
N1H36sing0.97Å1.00Å
C25H22sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C21C24C2759.8°60.0°
C24C21C2759.4°60.0°
C24C21H14120.1°117.5°
C24C21H15120.1°117.6°
C21C24H16120.0°117.5°
C21C24H17120.0°117.5°
C24C27C2160.9°60.1°
C24C27C23116.5°117.5°
C24C27H13116.2°117.5°
C27C24H16120.0°117.5°
C27C24H17120.1°117.5°
C21C27C23119.4°117.5°
C21C27H13116.1°117.5°
C27C21H14120.1°117.5°
C27C21H15120.1°117.6°
C27C23C22113.4°109.5°
C27C23H11108.5°109.4°
C27C23H12108.5°109.5°
C23C27H13116.3°115.5°
C23C22C20110.1°109.5°
C23C22H9109.3°109.5°
C23C22H10109.3°109.5°
C22C23H11108.5°109.5°
C22C23H12108.5°109.5°
C7C6C5126.3°120.0°
C6C7C8116.8°120.1°
C7C6H5116.9°120.1°
C6C7H6121.6°119.9°
C6C5C4117.4°120.0°
C6C5H4121.3°120.0°
C5C6H5116.9°120.0°
C7C8C9118.1°120.0°
C8C7H6121.6°120.0°
C7C8H8120.9°120.0°
O21C20C22126.5°120.0°
O21C20N2122.6°120.0°
C22C20N2110.9°120.0°
C20C22H9109.3°109.4°
C20C22H10109.3°109.5°
C5C4C9117.8°120.0°
C5C4C3123.0°120.0°
C4C5H4121.3°120.0°
C20N2C2128.7°119.9°
C20N2H7115.7°120.0°
C8C9C4123.6°120.0°
C9C8H8120.9°120.0°
C8C9H18118.2°120.0°
C9C4C3119.2°120.0°
C4C9H18118.2°120.0°
C4C3C2113.5°109.5°
C4C3H2108.5°109.5°
C4C3H3108.5°109.5°
N2C2C3108.7°109.5°
N2C2C17104.9°109.4°
N2C2H1111.2°109.5°
C2N2H7115.7°120.0°
C3C2C17110.7°109.5°
C3C2H1110.2°109.5°
C2C3H2108.4°109.5°
C2C3H3108.5°109.5°
C2C17N116.2°120.0°
C2C17O4119.3°120.0°
C17C2H1110.9°109.4°
O1C13C12123.7°125.0°
O1C13N1126.8°124.9°
C17NC10121.3°120.0°
NC17O4124.4°120.0°
C17NH19119.4°120.0°
NC10C11104.7°109.5°
NC10C14109.8°109.5°
C10NH19119.4°120.1°
NC10H20112.1°109.5°
C13C12C11110.0°110.5°
C13C12C26105.7°104.1°
C12C13N1109.5°110.1°
C13C12H32110.0°110.5°
C11C12C26111.5°110.7°
C12C11C10112.6°109.5°
C12C11H30108.7°109.5°
C12C11H31108.7°109.5°
C11C12H32109.8°110.4°
C12C26C25105.4°101.6°
C26C12H32109.7°110.5°
C12C26H33110.5°111.0°
C12C26H34110.5°111.0°
C13N1C25114.7°111.3°
C13N1H36122.6°124.3°
N1C25C26104.5°105.4°
N1C25H35110.7°110.2°
C25N1H36122.6°124.3°
N1C25H22110.7°110.3°
C11C10C14107.6°109.4°
C11C10H20111.0°109.5°
C10C11H30108.7°109.4°
C10C11H31108.7°109.5°
C25C26H33110.5°110.7°
C25C26H34110.5°111.3°
C26C25H35110.7°110.2°
C26C25H22110.7°110.2°
C10C14C15112.5°120.0°
C14C10H20111.3°109.4°
C10C14H21123.7°120.0°
C14C15C16114.9°120.0°
C15C14H21123.8°120.0°
C14C15H23122.5°120.0°
C15C16O2116.0°120.0°
C15C16O3124.7°120.0°
C16C15H23122.5°120.0°
C16O2C18118.8°117.0°
O2C16O3119.2°120.0°
O2C18C19114.2°109.5°
O2C18H25108.3°109.5°
O2C18H26108.2°109.5°
C19C18H25108.3°109.4°
C19C18H26108.3°109.5°
C18C19H27109.5°109.4°
C18C19H28109.5°109.4°
C18C19H29109.5°109.5°
H2C3H3109.5°109.4°
H9C22H10109.4°109.4°
H11C23H12109.5°109.4°
H14C21H15109.5°115.5°
H16C24H17109.5°115.6°
H25C18H26109.5°109.4°
H27C19H28109.5°109.5°
H27C19H29109.5°109.5°
H28C19H29109.5°109.5°
H30C11H31109.5°109.4°
H33C26H34109.4°110.9°
H35C25H22109.5°110.3°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C21C24C27H16109.4°107.4°
C21C24C27H17109.4°107.5°
C24C21C27H14109.3°107.4°
C24C21C27H15109.3°107.5°
C21C24C27C23110.5°107.6°
C21C24C27H13106.7°107.5°
C24C21H14H15145.1°145.7°
C21C24H16H17144.8°145.7°
C24C27C23H13142.8°145.7°
C24C27C23C2236.2°116.2°
C24C27C23H1184.4°3.8°
C24C27C23H12156.8°123.7°
C27C24H16H17144.9°145.8°
C21C27C23H13147.3°145.6°
C21C27C23C2233.7°175.1°
C21C27C23H11154.3°65.0°
C21C27C23H1286.9°55.0°
C27C21H14H15145.1°145.7°
C27C23C22H11120.6°120.0°
C27C23C22H12120.6°120.1°
C27C23C22C20114.9°180.0°
C27C23C22H9125.0°60.0°
C27C23C22H105.2°59.9°
C27C23H11H12118.2°120.0°
C23C27C21H14144.9°0.1°
C23C27C21H153.5°144.9°
C23C27C24H161.1°145.0°
C23C27C24H17140.1°0.1°
C23C22C20O2127.1°0.1°
C23C22C20H9120.1°120.0°
C23C22C20H10120.1°120.1°
C23C22C20N2151.6°180.0°
C23C22H9H10119.7°120.0°
C22C23H11H12118.2°120.0°
C22C23C27H13179.0°29.5°
C7C6C5H5180.0°180.0°
C6C7C8H6180.0°180.0°
C7C6C5C42.6°0.1°
C6C7C8C90.2°0.1°
C7C6C5H4177.4°180.0°
C6C7C8H8179.8°180.0°
C5C6C7C81.7°0.0°
C6C5C4H4180.0°179.9°
C6C5C4C91.9°0.1°
C6C5C4C3179.3°179.7°
C5C6C7H6178.3°180.0°
C7C8C9H8180.0°179.9°
C7C8C9C40.2°0.1°
C8C7C6H5178.3°180.0°
C7C8C9H18179.8°179.8°
O21C20C22N2178.7°180.0°
O21C20N2C21.9°0.0°
O21C20N2H7178.1°179.9°
O21C20C22H9147.2°120.0°
O21C20C22H1093.0°120.0°
C22C20N2C2179.3°179.9°
C22C20N2H70.7°0.0°
C20C22H9H10119.7°120.0°
C20C22C23H115.7°60.0°
C20C22C23H12124.5°59.9°
C5C4C9C80.6°0.0°
C5C4C9C3178.8°179.6°
C5C4C3C210.7°89.7°
C5C4C3H2131.2°150.3°
C5C4C3H3109.9°30.3°
C4C5C6H5177.4°179.9°
C5C4C9H18179.3°179.7°
C20N2C2H7180.0°179.9°
C20N2C2C348.3°85.0°
C20N2C2C17166.8°155.0°
C20N2C2H173.2°35.1°
N2C20C22H931.5°60.0°
N2C20C22H1088.3°59.9°
C8C9C4H18180.0°179.7°
C8C9C4C3179.5°179.6°
C9C8C7H6179.8°179.9°
C9C4C3C2170.6°90.0°
C9C4C3H250.0°30.0°
C9C4C3H368.8°150.0°
C9C4C5H4178.1°180.0°
C4C9C8H8179.8°180.0°
C4C3C2N2104.8°65.0°
C4C3C2H2120.6°120.0°
C4C3C2H3120.6°120.0°
C4C3C2C17140.4°175.0°
C4C3C2H117.3°55.0°
C4C3H2H3118.2°120.0°
C3C4C5H40.7°0.3°
C3C4C9H180.5°0.0°
N2C2C3C17114.7°120.0°
N2C2C3H1122.2°120.1°
N2C2C17H1120.2°119.9°
N2C2C17N85.7°180.0°
N2C2C17O493.0°0.1°
N2C2C3H2134.6°55.0°
N2C2C3H315.7°174.9°
C3C2C17H1122.7°120.0°
C3C2C17N157.2°59.9°
C3C2C17O424.1°120.0°
C2C3H2H3118.2°120.0°
C3C2N2H7131.7°94.9°
C2C17NO4178.6°179.9°
C2C17NC10177.5°175.0°
C17C2C3H219.8°65.0°
C17C2C3H399.0°55.0°
C17C2N2H713.2°25.1°
C2C17NH192.5°5.1°
O1C13C12N1178.6°179.8°
O1C13C12C1156.4°77.4°
O1C13C12C26177.0°163.8°
O1C13N1C25174.7°179.3°
O1C13C12H3264.7°45.1°
O1C13N1H365.3°0.4°
C17NC10H19180.0°180.0°
C17NC10C11124.1°88.2°
C17NC10C14120.6°151.8°
NC17C2H134.5°60.1°
C17NC10H203.7°31.9°
C10NC17O41.1°5.0°
NC10C11C1248.7°173.4°
NC10C11C14116.8°120.0°
NC10C11H20121.2°120.0°
NC10C14H20124.7°120.0°
NC10C14C1578.0°106.6°
NC10C14H21102.0°73.4°
NC10C11H30169.2°53.4°
NC10C11H3171.7°66.6°
O4C17C2H1146.8°120.0°
O4C17NH19178.9°175.0°
C13C12C11C26117.0°114.8°
C13C12C11H32121.2°122.6°
C13C12C26H32118.5°118.7°
C12C13N1C253.9°0.5°
C13C12C11C10161.5°74.6°
C13C12C26C251.0°25.1°
C13C12C11H3041.0°45.4°
C13C12C11H3178.0°165.4°
C13C12C26H33120.4°142.9°
C13C12C26H34118.4°93.4°
C12C13N1H36176.1°179.8°
C11C12C26H32121.9°122.6°
C11C12C13N1122.2°102.5°
C12C11C10H30120.5°120.0°
C12C11C10H31120.5°120.1°
C11C12C26C25118.5°93.6°
C12C11C10C14165.5°66.6°
C12C11C10H2072.4°53.3°
C12C11H30H31118.6°120.0°
C11C12C26H330.8°24.2°
C11C12C26H34122.1°147.9°
C26C12C13N11.6°16.4°
C12C26C25N13.0°25.8°
C26C12C11C1044.5°170.6°
C12C26C25H33119.3°118.0°
C12C26C25H34119.4°118.2°
C26C12C11H3075.9°69.4°
C26C12C11H31165.0°50.6°
C12C26H33H34121.9°123.8°
C12C26C25H35122.2°144.7°
C12C26C25H22116.2°93.2°
C13N1C25H36180.0°179.7°
C13N1C25C264.4°17.3°
N1C13C12H32116.7°135.0°
C13N1C25H35123.7°136.3°
C13N1C25H22114.8°101.7°
N1C25C26H35119.2°118.9°
N1C25C26H22119.2°119.0°
N1C25C26H33122.3°143.7°
N1C25C26H34116.4°92.4°
N1C25H35H22122.3°122.0°
C11C10C14H20121.8°120.0°
C11C10C14C15168.5°133.4°
C11C10NH1955.8°91.8°
C11C10C14H2111.4°46.6°
C10C11H30H31118.6°120.0°
C10C11C12H3277.3°48.0°
C25C26C12H32119.5°143.8°
C25C26H33H34121.9°124.1°
C26C25H35H22122.3°122.0°
C26C25N1H36175.6°163.0°
C10C14C15H21180.0°180.0°
C10C14C15C1650.1°17.5°
C14C10NH1959.4°28.2°
C10C14C15H23129.9°162.5°
C14C10C11H3074.0°173.4°
C14C10C11H3145.1°53.4°
C14C15C16H23180.0°180.0°
C14C15C16O294.2°173.5°
C14C15C16O389.3°6.5°
C15C14C10H2046.7°13.4°
C15C16O2O3176.7°180.0°
C15C16O2C18110.1°180.0°
C16C15C14H21129.8°162.5°
C16O2C18C1937.9°180.0°
O2C16C15H2385.8°6.5°
C16O2C18H2582.8°60.0°
C16O2C18H26158.6°60.0°
C18O2C16O366.5°0.0°
O2C18C19H25120.7°120.0°
O2C18C19H26120.7°120.0°
O2C18H25H26117.8°120.0°
O2C18C19H27180.0°180.0°
O2C18C19H2860.0°60.0°
O2C18C19H2960.0°60.0°
O3C16C15H2390.7°173.5°
C19C18H25H26117.9°120.0°
C18C19H27H28120.0°119.9°
C18C19H27H29120.0°120.0°
C18C19H28H29120.0°120.0°
H1C2C3H2103.3°175.0°
H1C2C3H3137.9°65.0°
H1C2N2H7106.8°145.0°
H4C5C6H52.6°0.0°
H5C6C7H61.7°0.0°
H6C7C8H80.2°0.0°
H8C8C9H180.2°0.4°
H9C22C23H11114.4°NaN°
H9C22C23H124.4°60.0°
H10C22C23H11125.8°60.0°
H10C22C23H12115.4°180.0°
H11C23C27H1358.5°149.4°
H12C23C27H1360.4°90.6°
H13C27C21H142.4°145.0°
H13C27C21H15143.8°0.0°
H13C27C24H16143.9°0.0°
H13C27C24H172.7°145.0°
H14C21C24H16141.3°145.0°
H14C21C24H170.1°0.0°
H15C21C24H160.1°0.0°
H15C21C24H17141.3°145.0°
H19NC10H20176.3°148.2°
H20C10C14H21133.3°166.6°
H20C10C11H3048.0°66.7°
H20C10C11H31167.1°173.4°
H21C14C15H2350.2°17.5°
H25C18C19H2759.3°60.0°
H25C18C19H28179.3°180.0°
H25C18C19H2960.7°60.0°
H26C18C19H2759.3°60.0°
H26C18C19H2860.7°60.0°
H26C18C19H29179.3°180.0°
H27C19H28H29120.0°120.1°
H30C11C12H32162.2°167.9°
H31C11C12H3243.1°72.1°
H32C12C26H33121.1°98.5°
H32C12C26H340.2°25.3°
H33C26C25H35118.4°97.3°
H33C26C25H223.1°24.7°
H34C26C25H352.8°26.5°
H34C26C25H22124.4°148.6°
H35C25N1H3656.3°44.0°
H36N1C25H2265.3°78.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon