Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5E9

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C19C18sing1.53Å1.52Å
O3C16doub1.22Å1.22Å
C18O2sing1.45Å1.42Å
C16C15sing1.47Å1.51Å
C16O2sing1.35Å1.44Å
C15C14doub1.33Å1.52Å
C14C10sing1.51Å1.53Å
C10C11sing1.53Å1.50Å
C10Nsing1.46Å1.49Å
C11C12sing1.53Å1.55Å
O1C13doub1.21Å1.24Å
NC17sing1.35Å1.35Å
C13C12sing1.51Å1.50Å
C13N1sing1.34Å1.35Å
C26C12sing1.55Å1.52Å
C26C25sing1.54Å1.54Å
N1C25sing1.47Å1.46Å
O4C17doub1.21Å1.23Å
C17C2sing1.51Å1.52Å
C3C2sing1.53Å1.52Å
C3C4sing1.51Å1.52Å
C2C21sing1.53Å1.56Å
C4C9doub1.38Å1.38ÅAromatic
C4C5sing1.38Å1.40ÅAromatic
C9C8sing1.38Å1.40ÅAromatic
OCdoub1.21Å1.23Å
C5C6doub1.38Å1.39ÅAromatic
C21Csing1.51Å1.53Å
C8C7doub1.38Å1.41ÅAromatic
C24C22sing1.53Å1.53Å
CC20sing1.51Å1.54Å
C6C7sing1.38Å1.39ÅAromatic
C7F1sing1.35Å1.36Å
C22C20sing1.53Å1.54Å
C22C23sing1.53Å1.52Å
C20N2sing1.47Å1.50Å
C2H1sing1.09Å1.10Å
C3H2sing1.09Å1.10Å
C3H3sing1.09Å1.10Å
C5H4sing1.08Å1.08Å
C6H5sing1.08Å1.08Å
C8H6sing1.08Å1.08Å
N1H7sing0.97Å1.00Å
N2H8sing1.01Å1.00Å
N2H9sing1.01Å1.00Å
NH11sing0.97Å1.00Å
C18H12sing1.09Å1.10Å
C18H13sing1.09Å1.10Å
C19H14sing1.09Å1.10Å
C19H15sing1.09Å1.10Å
C19H16sing1.09Å1.10Å
C15H17sing1.08Å1.08Å
C14H19sing1.08Å1.08Å
C10H21sing1.09Å1.10Å
C11H22sing1.09Å1.10Å
C11H23sing1.09Å1.10Å
C12H24sing1.09Å1.10Å
C26H25sing1.09Å1.10Å
C26H26sing1.09Å1.10Å
C25H27sing1.09Å1.10Å
C25H28sing1.09Å1.10Å
C21H29sing1.09Å1.10Å
C21H30sing1.09Å1.10Å
C20H31sing1.09Å1.10Å
C22H32sing1.09Å1.10Å
C24H33sing1.09Å1.10Å
C24H34sing1.09Å1.10Å
C24H35sing1.09Å1.10Å
C23H36sing1.09Å1.10Å
C23H37sing1.09Å1.10Å
C23H38sing1.09Å1.10Å
C9H39sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C19C18O2108.4°109.5°
C19C18H12109.7°109.5°
C19C18H13109.8°109.4°
C18C19H14109.5°109.5°
C18C19H15109.5°109.4°
C18C19H16109.4°109.5°
O3C16C15123.5°120.0°
O3C16O2117.6°120.0°
C18O2C16113.3°117.0°
O2C18H12109.7°109.5°
O2C18H13109.7°109.5°
C15C16O2118.9°120.0°
C16C15C14112.4°120.0°
C16C15H17123.8°120.0°
C15C14C10107.8°120.0°
C14C15H17123.8°120.0°
C15C14H19126.1°120.0°
C14C10C11112.9°109.5°
C14C10N104.8°109.5°
C10C14H19126.1°120.0°
C14C10H21108.6°109.5°
C11C10N112.3°109.4°
C10C11C12114.4°109.5°
C11C10H21109.0°109.5°
C10C11H22108.2°109.5°
C10C11H23108.2°109.5°
C10NC17119.7°120.0°
C10NH11120.2°120.0°
NC10H21109.1°109.4°
C11C12C13111.1°110.8°
C11C12C26116.0°110.5°
C12C11H22108.3°109.4°
C12C11H23108.2°109.5°
C11C12H24108.8°110.4°
O1C13C12122.2°124.9°
O1C13N1127.1°125.0°
NC17O4122.9°120.0°
NC17C2117.5°120.0°
C17NH11120.2°120.0°
C12C13N1110.6°110.1°
C13C12C26101.9°104.1°
C13C12H24109.5°110.3°
C13N1C25113.1°111.3°
C13N1H7123.4°124.4°
C12C26C25106.9°101.6°
C26C12H24109.2°110.5°
C12C26H25110.1°110.9°
C12C26H26110.1°111.0°
C26C25N1102.8°105.5°
C25C26H25110.1°111.0°
C25C26H26110.1°111.0°
C26C25H27111.1°110.2°
C26C25H28111.1°110.2°
C25N1H7123.4°124.3°
N1C25H27111.1°110.2°
N1C25H28111.1°110.3°
O4C17C2119.7°120.0°
C17C2C3105.3°109.5°
C17C2C21113.7°109.5°
C17C2H1108.0°109.5°
C2C3C4116.8°109.5°
C3C2C21114.1°109.5°
C3C2H1108.0°109.5°
C2C3H2107.6°109.5°
C2C3H3107.6°109.5°
C3C4C9121.5°119.9°
C3C4C5119.5°120.0°
C4C3H2107.6°109.5°
C4C3H3107.6°109.5°
C2C21C116.7°109.5°
C21C2H1107.5°109.5°
C2C21H29107.6°109.5°
C2C21H30107.6°109.5°
C9C4C5119.0°120.1°
C4C9C8120.5°120.0°
C4C9H39119.7°120.0°
C4C5C6121.1°120.0°
C4C5H4119.5°120.0°
C9C8C7120.3°120.0°
C9C8H6119.8°120.0°
C8C9H39119.7°120.0°
OCC21123.9°120.0°
OCC20117.2°120.0°
C5C6C7120.3°120.0°
C6C5H4119.4°120.0°
C5C6H5119.9°120.0°
C21CC20118.8°120.0°
CC21H29107.7°109.4°
CC21H30107.6°109.5°
C8C7C6118.8°120.0°
C8C7F1120.7°120.0°
C7C8H6119.9°120.0°
C24C22C20111.8°109.5°
C24C22C23110.4°109.5°
C24C22H32107.7°109.4°
C22C24H33109.5°109.4°
C22C24H34109.5°109.5°
C22C24H35109.5°109.5°
CC20C22110.5°109.5°
CC20N2112.9°109.5°
CC20H31108.0°109.5°
C6C7F1120.5°120.0°
C7C6H5119.8°120.0°
C20C22C23111.5°109.5°
C22C20N2109.0°109.5°
C22C20H31107.9°109.5°
C20C22H32107.5°109.5°
C23C22H32107.8°109.5°
C22C23H36109.5°109.4°
C22C23H37109.5°109.5°
C22C23H38109.5°109.4°
C20N2H8109.5°111.0°
C20N2H9109.4°111.0°
N2C20H31108.4°109.5°
H2C3H3109.5°109.5°
H8N2H9109.5°111.0°
H12C18H13109.5°109.5°
H14C19H15109.5°109.5°
H14C19H16109.5°109.5°
H15C19H16109.5°109.5°
H22C11H23109.5°109.5°
H25C26H26109.4°110.9°
H27C25H28109.4°110.3°
H29C21H30109.5°109.5°
H33C24H34109.5°109.5°
H33C24H35109.5°109.4°
H34C24H35109.4°109.5°
H36C23H37109.4°109.5°
H36C23H38109.5°109.5°
H37C23H38109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C19C18O2H12119.8°120.0°
C19C18O2H13119.8°120.0°
C19C18O2C1667.1°180.0°
C19C18H12H13120.5°120.0°
C18C19H14H15120.0°120.0°
C18C19H14H16120.0°120.0°
C18C19H15H16120.0°120.0°
O3C16O2C1841.9°0.0°
O3C16C15O2178.4°180.0°
O3C16C15C1444.2°3.9°
O3C16C15H17135.8°176.2°
C18O2C16C15136.6°180.0°
O2C18H12H13120.5°120.0°
O2C18C19H14180.0°60.0°
O2C18C19H1560.0°60.0°
O2C18C19H1660.0°180.0°
C16C15C14H17180.0°180.0°
C16C15C14C1063.9°20.2°
C16C15C14H19116.1°159.7°
O2C16C15C14137.4°176.2°
C16O2C18H1252.8°60.0°
C16O2C18H13173.1°60.0°
O2C16C15H1742.6°3.8°
C15C14C10H19180.0°179.9°
C15C14C10C11168.9°130.1°
C15C14C10N68.6°109.9°
C15C14C10H2147.9°10.1°
C14C10C11N118.2°120.1°
C14C10C11H21120.7°120.0°
C14C10NH21116.1°120.0°
C14C10C11C12176.3°62.8°
C14C10NC17127.3°152.1°
C14C10NH1152.8°27.8°
C10C14C15H17116.1°159.7°
C14C10C11H2263.0°177.3°
C14C10C11H2355.5°57.2°
C11C10NH21121.0°119.9°
C10C11C12H22120.7°120.0°
C10C11C12H23120.7°120.0°
C11C10NC17109.9°87.9°
C10C11C12C13174.8°75.9°
C10C11C12C2659.0°169.2°
C11C10NH1170.1°92.2°
C11C10C14H1911.1°50.0°
C10C11H22H23117.8°120.0°
C10C11C12H2464.6°46.7°
NC10C11C1265.5°177.2°
C10NC17H11180.0°179.9°
C10NC17O41.4°5.1°
C10NC17C2179.4°175.0°
NC10C14H19111.4°70.0°
NC10C11H2255.2°57.2°
NC10C11H23173.7°62.8°
C11C12C13O134.3°77.6°
C11C12C13C26124.2°118.8°
C11C12C13H24120.3°122.6°
C11C12C13N1143.2°102.3°
C11C12C26H24123.4°122.5°
C11C12C26C25142.0°93.9°
C12C11C10H2155.5°57.3°
C12C11H22H23117.8°119.9°
C11C12C26H2522.3°24.2°
C11C12C26H2698.4°148.0°
O1C13C12N1177.5°179.9°
O1C13C12C26158.5°163.6°
O1C13N1C25168.0°179.5°
O1C13N1H711.9°0.2°
O1C13C12H2485.9°45.0°
NC17O4C2178.0°179.9°
NC17C2C396.6°180.0°
NC17C2C21137.7°60.0°
NC17C2H118.6°60.0°
C17NC10H2111.1°32.1°
C13C12C26H24115.8°118.4°
C13C12C26C2521.1°25.2°
C12C13N1C259.3°0.4°
C12C13N1H7170.7°179.9°
C13C12C11H2264.5°44.2°
C13C12C11H2354.0°164.1°
C13C12C26H2598.5°143.2°
C13C12C26H26140.8°93.0°
N1C13C12C2619.0°16.5°
C13N1C25C264.7°17.3°
C13N1C25H7180.0°179.7°
N1C13C12H2496.6°135.0°
C13N1C25H27123.6°136.3°
C13N1C25H28114.2°101.7°
C12C26C25H25119.6°118.0°
C12C26C25H26119.6°118.1°
C12C26C25N116.5°25.8°
C26C12C11H22179.7°70.7°
C26C12C11H2361.7°49.2°
C12C26H25H26121.2°123.9°
C12C26C25H27135.4°144.8°
C12C26C25H28102.5°93.2°
C26C25N1H27118.9°119.0°
C26C25N1H28119.0°119.0°
C26C25N1H7175.3°163.0°
C25C26C12H2494.6°143.6°
C25C26H25H26121.2°123.9°
C26C25H27H28123.1°121.9°
N1C25C26H25103.2°143.8°
N1C25C26H26136.1°92.3°
N1C25H27H28123.1°122.0°
O4C17C2C385.3°0.0°
O4C17C2C2140.4°120.0°
O4C17C2H1159.5°120.0°
O4C17NH11178.6°175.0°
C17C2C3C21125.4°120.0°
C17C2C3H1115.1°120.0°
C17C2C3C4173.6°172.6°
C17C2C21H1119.4°120.0°
C17C2C21C55.4°51.7°
C17C2C3H265.4°67.4°
C17C2C3H352.5°52.6°
C2C17NH110.6°4.9°
C17C2C21H2965.7°171.7°
C17C2C21H30176.4°68.3°
C2C3C4H2121.1°120.0°
C2C3C4H3121.1°120.0°
C3C2C21H1119.7°120.0°
C2C3C4C971.7°96.4°
C2C3C4C5110.2°83.3°
C3C2C21C176.2°68.3°
C2C3H2H3116.7°120.0°
C3C2C21H2955.1°51.7°
C3C2C21H3062.7°171.7°
C4C3C2C2161.0°67.4°
C3C4C9C5178.2°179.7°
C3C4C9C8179.6°179.8°
C3C4C5C6179.3°180.0°
C4C3C2H158.4°52.6°
C4C3H2H3116.7°120.0°
C3C4C5H40.7°0.0°
C3C4C9H390.4°0.0°
C2C21CO0.5°6.5°
C2C21CH29121.0°120.0°
C2C21CH30121.0°120.0°
C2C21CC20177.0°173.5°
C21C2C3H260.0°52.6°
C21C2C3H3177.9°172.6°
C2C21H29H30116.7°120.0°
C4C9C8H39180.0°179.7°
C9C4C5C61.1°0.3°
C4C9C8C70.2°0.5°
C9C4C3H2167.3°23.6°
C9C4C3H349.4°143.6°
C9C4C5H4178.9°179.7°
C4C9C8H6179.8°179.7°
C5C4C9C81.4°0.5°
C4C5C6H4180.0°180.0°
C4C5C6C70.4°0.0°
C5C4C3H210.9°156.7°
C5C4C3H3128.8°36.7°
C4C5C6H5179.6°180.0°
C5C4C9H39178.6°179.7°
C9C8C7H6180.0°179.8°
C9C8C7C61.2°0.2°
C9C8C7F1178.9°179.7°
OCC21C20177.6°180.0°
OCC20C22110.5°90.9°
OCC20N211.8°29.1°
OCC21H29121.6°113.5°
OCC21H30120.5°126.5°
OCC20H31131.7°149.1°
C5C6C7C81.6°0.1°
C5C6C7H5180.0°179.9°
C5C6C7F1179.2°180.0°
C21CC20C2267.3°89.1°
C21CC20N2170.5°150.8°
CC21C2H164.1°171.7°
CC21H29H30116.7°120.0°
C21CC20H3150.6°30.8°
C8C7C6F1177.7°180.0°
C8C7C6H5178.4°180.0°
C7C8C9H39179.7°179.8°
C24C22C20C53.5°65.1°
C24C22C20C23124.1°120.0°
C24C22C20H32118.0°119.9°
C24C22C23H32117.3°119.9°
C24C22C20N271.1°174.9°
C24C22C20H31171.4°54.9°
C22C24H33H34120.0°120.0°
C22C24H33H35120.0°120.0°
C22C24H34H35120.0°120.1°
C24C22C23H36180.0°179.9°
C24C22C23H3760.0°59.9°
C24C22C23H3860.0°60.1°
CC20C22N2124.5°120.0°
CC20C22H31117.9°120.0°
CC20C22C23177.6°174.9°
CC20N2H31119.6°120.0°
CC20N2H8180.0°63.9°
CC20N2H960.0°60.0°
C20CC21H2956.0°66.5°
C20CC21H3061.9°53.4°
CC20C22H3264.5°54.9°
C7C6C5H4179.6°180.0°
C6C7C8H6178.7°180.0°
F1C7C6H50.8°0.0°
F1C7C8H61.1°0.1°
C20C22C23H32117.7°120.0°
C22C20N2H31117.2°120.0°
C22C20N2H856.9°176.1°
C22C20N2H9176.9°60.0°
C20C22C24H33180.0°51.9°
C20C22C24H3460.0°171.8°
C20C22C24H3560.0°68.1°
C20C22C23H3655.0°60.0°
C20C22C23H3765.0°180.0°
C20C22C23H38175.1°60.0°
C23C22C20N253.0°54.9°
C23C22C20H3164.5°65.1°
C23C22C24H3355.3°68.2°
C23C22C24H3464.8°51.8°
C23C22C24H35175.3°171.9°
C22C23H36H37120.0°120.0°
C22C23H36H38120.0°119.9°
C22C23H37H38120.0°120.0°
C20N2H8H9120.0°123.9°
N2C20C22H32170.9°65.2°
H1C2C3H2179.5°172.6°
H1C2C3H362.6°67.4°
H1C2C21H29174.8°68.3°
H1C2C21H3057.0°51.7°
H4C5C6H50.4°0.0°
H6C8C9H390.2°0.0°
H7N1C25H2756.3°44.0°
H7N1C25H2865.8°78.0°
H8N2C20H3160.4°56.1°
H9N2C20H3159.7°180.0°
H11NC10H21168.9°147.9°
H12C18C19H1460.2°180.0°
H12C18C19H1559.8°60.0°
H12C18C19H16179.8°60.0°
H13C18C19H1460.2°60.0°
H13C18C19H15179.8°180.0°
H13C18C19H1659.8°60.0°
H14C19H15H16120.0°120.0°
H17C15C14H1964.0°20.4°
H19C14C10H21132.0°170.0°
H21C10C11H22176.3°62.7°
H21C10C11H2365.2°177.2°
H22C11C12H2456.1°166.7°
H23C11C12H24174.7°73.3°
H24C12C26H25145.7°98.3°
H24C12C26H2625.0°25.5°
H25C26C25H2715.8°97.2°
H25C26C25H28137.9°24.8°
H26C26C25H27105.0°26.7°
H26C26C25H2817.1°148.6°
H31C20C22H3253.4°174.8°
H32C22C24H3362.1°171.8°
H32C22C24H34177.9°68.2°
H32C22C24H3557.9°51.9°
H32C22C23H3662.7°60.0°
H32C22C23H37177.3°60.0°
H32C22C23H3857.3°180.0°
H33C24H34H35120.0°120.0°
H36C23H37H38120.0°120.1°

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon