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5CY

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C11C12sing1.53Å1.53Å
C11N1sing1.46Å1.48Å
C12C13sing1.53Å1.53Å
C15C16doub1.38Å1.39ÅAromatic
C15C14sing1.40Å1.40ÅAromatic
C13O1sing1.43Å1.43Å
C16C17sing1.38Å1.40ÅAromatic
N1C14sing1.39Å1.34Å
N1C10sing1.37Å1.35Å
C14C19doub1.39Å1.39ÅAromatic
C17C18doub1.38Å1.39ÅAromatic
C9C10doub1.35Å1.51Å
C9C8sing1.41Å1.47Å
C10C20sing1.51Å1.55Å
C19C18sing1.38Å1.40ÅAromatic
C19C20sing1.51Å1.51Å
C7C8doub1.36Å1.34Å
C7C6sing1.40Å1.47Å
C21C20sing1.53Å1.53Å
C23C24sing1.53Å1.53Å
C23N2sing1.47Å1.47Å
C20C22sing1.53Å1.54Å
C24C25sing1.53Å1.52Å
O2C25sing1.43Å1.43Å
C5C6doub1.36Å1.34Å
C5C4sing1.40Å1.50Å
N2C4doub1.31Å1.36Å
N2C26sing1.36Å1.37Å
C4C2sing1.52Å1.51Å
C26C27doub1.40Å1.40ÅAromatic
C26C31sing1.40Å1.40ÅAromatic
C27C28sing1.38Å1.40ÅAromatic
C1C2sing1.53Å1.54Å
C2C31sing1.51Å1.49Å
C2C3sing1.53Å1.53Å
C31C30doub1.37Å1.41ÅAromatic
C28C29doub1.38Å1.40ÅAromatic
C30C29sing1.39Å1.40ÅAromatic
C1H1sing1.09Å1.10Å
C1H2sing1.09Å1.10Å
C1H3sing1.09Å1.10Å
O1H4sing0.97Å0.95Å
C11H5sing1.09Å1.10Å
C11H6sing1.09Å1.10Å
C12H7sing1.09Å1.10Å
C12H8sing1.09Å1.10Å
C13H9sing1.09Å1.10Å
C13H10sing1.09Å1.10Å
C15H11sing1.08Å1.08Å
C16H12sing1.08Å1.08Å
C17H13sing1.08Å1.08Å
C18H14sing1.08Å1.08Å
O2H15sing0.97Å0.95Å
C21H16sing1.09Å1.10Å
C21H17sing1.09Å1.10Å
C21H18sing1.09Å1.10Å
C22H19sing1.09Å1.10Å
C22H20sing1.09Å1.10Å
C22H21sing1.09Å1.10Å
C23H22sing1.09Å1.10Å
C23H23sing1.09Å1.10Å
C24H24sing1.09Å1.10Å
C24H25sing1.09Å1.10Å
C25H26sing1.09Å1.10Å
C25H27sing1.09Å1.10Å
C27H28sing1.08Å1.08Å
C28H29sing1.08Å1.08Å
C29H30sing1.08Å1.08Å
C3H31sing1.09Å1.10Å
C3H32sing1.09Å1.10Å
C3H33sing1.09Å1.10Å
C30H34sing1.08Å1.08Å
C5H36sing1.08Å1.08Å
C6H37sing1.08Å1.08Å
C7H38sing1.08Å1.08Å
C8H39sing1.08Å1.08Å
C9H40sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C12C11N1109.9°109.5°
C11C12C13112.3°109.5°
C12C11H5109.4°109.5°
C12C11H6109.4°109.4°
C11C12H7108.8°109.4°
C11C12H8108.8°109.4°
C11N1C14125.2°124.1°
C11N1C10127.6°124.1°
N1C11H5109.4°109.5°
N1C11H6109.4°109.5°
C12C13O1111.7°109.5°
C13C12H7108.8°109.5°
C13C12H8108.8°109.5°
C12C13H9108.9°109.4°
C12C13H10108.9°109.5°
C16C15C14119.3°120.1°
C15C16C17120.3°120.3°
C16C15H11120.3°119.9°
C15C16H12119.9°119.8°
C15C14N1132.4°130.6°
C15C14C19121.2°119.0°
C14C15H11120.4°120.0°
C13O1H4109.5°114.0°
O1C13H9108.9°109.5°
O1C13H10108.9°109.5°
C16C17C18120.0°119.8°
C17C16H12119.9°119.8°
C16C17H13120.0°120.1°
C14N1C10107.1°111.8°
N1C14C19106.5°110.5°
N1C10C9113.7°126.6°
N1C10C20119.2°106.8°
C14C19C18118.9°120.7°
C14C19C20118.9°106.7°
C17C18C19120.4°120.0°
C18C17H13120.0°120.1°
C17C18H14119.8°120.0°
C10C9C8127.7°120.1°
C9C10C20127.1°126.6°
C10C9H40116.2°119.9°
C9C8C7120.8°120.0°
C9C8H39119.6°119.9°
C8C9H40116.2°120.0°
C10C20C1988.3°104.2°
C10C20C2187.6°110.5°
C10C20C2289.5°110.5°
C18C19C20122.2°132.6°
C19C18H14119.8°120.0°
C19C20C21120.4°110.5°
C19C20C22114.8°110.5°
C8C7C6120.3°120.0°
C8C7H38119.8°120.0°
C7C8H39119.6°120.0°
C7C6C5121.6°120.0°
C7C6H37119.2°120.0°
C6C7H38119.8°120.0°
C21C20C22124.6°110.5°
C20C21H16109.5°109.5°
C20C21H17109.5°109.5°
C20C21H18109.5°109.5°
C24C23N2112.6°109.5°
C23C24C25109.8°109.5°
C24C23H22108.7°109.5°
C24C23H23108.7°109.5°
C23C24H24109.4°109.5°
C23C24H25109.4°109.5°
C23N2C4125.4°123.1°
C23N2C26126.4°123.2°
N2C23H22108.7°109.5°
N2C23H23108.6°109.5°
C20C22H19109.5°109.5°
C20C22H20109.4°109.5°
C20C22H21109.4°109.4°
C24C25O2108.4°109.5°
C25C24H24109.4°109.5°
C25C24H25109.4°109.4°
C24C25H26109.7°109.4°
C24C25H27109.8°109.5°
C25O2H15109.5°114.0°
O2C25H26109.8°109.5°
O2C25H27109.7°109.5°
C6C5C4124.3°120.0°
C6C5H36117.9°120.0°
C5C6H37119.2°120.1°
C5C4N2121.5°126.3°
C5C4C2124.5°126.3°
C4C5H36117.9°120.0°
C4N2C26108.2°113.7°
N2C4C2114.0°107.4°
N2C26C27133.1°131.1°
N2C26C31108.5°110.2°
C4C2C1112.8°110.7°
C4C2C3196.9°103.2°
C4C2C3113.7°110.8°
C27C26C31118.4°118.7°
C26C27C28120.8°120.0°
C26C27H28119.6°120.0°
C26C31C2112.4°105.4°
C26C31C30121.1°120.9°
C27C28C29120.2°120.5°
C28C27H28119.6°120.0°
C27C28H29119.9°119.7°
C1C2C31109.7°110.7°
C1C2C3111.0°110.6°
C2C1H1109.5°109.5°
C2C1H2109.5°109.5°
C2C1H3109.5°109.5°
C31C2C3112.0°110.7°
C2C31C30126.6°133.7°
C2C3H31109.5°109.5°
C2C3H32109.5°109.4°
C2C3H33109.4°109.5°
C31C30C29120.0°119.9°
C31C30H34120.0°120.0°
C28C29C30119.5°120.0°
C29C28H29119.9°119.7°
C28C29H30120.3°120.0°
C30C29H30120.2°120.0°
C29C30H34120.0°120.0°
H1C1H2109.5°109.5°
H1C1H3109.5°109.4°
H2C1H3109.5°109.5°
H5C11H6109.5°109.4°
H7C12H8109.4°109.5°
H9C13H10109.5°109.5°
H16C21H17109.4°109.5°
H16C21H18109.5°109.4°
H17C21H18109.5°109.4°
H19C22H20109.5°109.5°
H19C22H21109.5°109.5°
H20C22H21109.5°109.5°
H22C23H23109.5°109.4°
H24C24H25109.5°109.5°
H26C25H27109.5°109.5°
H31C3H32109.4°109.5°
H31C3H33109.5°109.5°
H32C3H33109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C12C11N1H5120.1°120.0°
C12C11N1H6120.1°120.0°
C11C12C13H7120.4°120.0°
C11C12C13H8120.4°120.0°
C11C12C13O1128.8°180.0°
C12C11N1C1478.9°90.0°
C12C11N1C10101.8°90.3°
C12C11H5H6119.8°119.9°
C11C12H7H8118.7°119.9°
C11C12C13H9110.9°60.0°
C11C12C13H108.4°60.0°
N1C11C12C1386.8°180.0°
C11N1C14C150.4°0.3°
C11N1C14C10179.4°179.7°
C11N1C14C19179.5°179.7°
C11N1C10C91.1°0.3°
C11N1C10C20179.3°179.7°
N1C11H5H6119.8°120.0°
N1C11C12H733.7°60.0°
N1C11C12H8152.8°60.0°
C12C13O1H9120.3°120.0°
C12C13O1H10120.3°120.0°
C12C13O1H4180.0°180.0°
C13C12C11H533.3°59.9°
C13C12C11H6153.2°60.0°
C13C12H7H8118.7°120.0°
C12C13H9H10119.0°120.0°
C16C15C14H11180.0°179.9°
C15C16C17H12180.0°179.9°
C16C15C14N1179.8°180.0°
C16C15C14C190.2°0.1°
C15C16C17C180.2°0.0°
C15C16C17H13179.8°179.9°
C14C15C16C170.2°0.1°
C15C14N1C19179.9°179.9°
C15C14N1C10179.9°180.0°
C15C14C19C180.9°0.0°
C15C14C19C20178.9°180.0°
C14C15C16H12179.8°180.0°
O1C13C12H78.3°60.0°
O1C13C12H8110.8°60.0°
O1C13H9H10119.0°120.0°
C16C17C18H13180.0°179.9°
C16C17C18C190.9°0.0°
C17C16C15H11179.9°180.0°
C16C17C18H14179.1°180.0°
C14N1C10C9179.5°180.0°
C14N1C10C201.2°0.0°
N1C14C19C18179.1°180.0°
N1C14C19C201.1°0.1°
C14N1C11H5161.1°149.9°
C14N1C11H641.2°30.0°
N1C14C15H110.2°0.1°
C10N1C14C190.1°0.1°
N1C10C9C20178.1°180.0°
N1C10C9C8179.1°180.0°
N1C10C20C191.6°0.0°
N1C10C20C21122.2°118.7°
N1C10C20C22113.2°118.7°
C10N1C11H518.2°29.7°
C10N1C11H6138.1°149.7°
N1C10C9H400.8°0.0°
C14C19C18C171.3°0.0°
C14C19C20C101.5°0.0°
C14C19C18C20177.9°180.0°
C14C19C20C2187.7°118.7°
C14C19C20C2287.2°118.7°
C19C14C15H11179.8°180.0°
C14C19C18H14178.7°180.0°
C17C18C19H14180.0°180.0°
C17C18C19C20179.2°179.9°
C18C17C16H12179.8°179.9°
C10C9C8H40180.0°180.0°
C9C10C20C19179.6°180.0°
C10C9C8C7173.4°180.0°
C9C10C20C2159.9°61.3°
C9C10C20C2264.7°61.3°
C10C9C8H396.6°0.0°
C8C9C10C202.8°0.0°
C9C8C7H39180.0°179.9°
C9C8C7C6178.3°180.0°
C9C8C7H381.7°0.1°
C10C20C19C18179.5°180.0°
C10C20C19C2186.2°118.7°
C10C20C19C2288.7°118.7°
C10C20C21C2287.8°122.6°
C10C20C21H16180.0°60.0°
C10C20C21H1760.0°180.0°
C10C20C21H1860.0°60.0°
C10C20C22H19180.0°60.0°
C10C20C22H2060.0°180.0°
C10C20C22H2160.0°60.0°
C20C10C9H40177.2°180.0°
C18C19C20C2194.4°61.3°
C18C19C20C2290.8°61.3°
C19C18C17H13179.1°180.0°
C19C20C21C22174.3°122.6°
C20C19C18H140.8°0.1°
C19C20C21H1693.5°54.8°
C19C20C21H17146.6°65.2°
C19C20C21H1826.6°174.8°
C19C20C22H1992.1°174.8°
C19C20C22H2027.9°65.2°
C19C20C22H21147.9°54.8°
C8C7C6H38180.0°179.9°
C8C7C6C5170.1°180.0°
C8C7C6H379.9°0.1°
C7C8C9H406.5°0.1°
C7C6C5H37180.0°179.9°
C7C6C5C4178.1°174.7°
C7C6C5H361.8°5.3°
C6C7C8H391.7°0.1°
C20C21H16H17120.0°120.0°
C20C21H16H18120.0°120.0°
C20C21H17H18120.0°120.0°
C21C20C22H1993.3°62.6°
C21C20C22H20146.7°57.4°
C21C20C22H2126.7°177.4°
C24C23N2H22120.5°120.0°
C24C23N2H23120.5°120.0°
C23C24C25H24120.0°120.0°
C23C24C25H25120.0°120.0°
C23C24C25O254.9°180.0°
C24C23N2C4125.2°114.5°
C24C23N2C2656.0°65.6°
C24C23H22H23118.6°120.0°
C23C24H24H25119.8°120.0°
C23C24C25H26174.7°60.0°
C23C24C25H2764.9°60.0°
N2C23C24C2558.6°180.0°
C23N2C4C50.3°0.0°
C23N2C4C26178.9°180.0°
C23N2C4C2178.4°180.0°
C23N2C26C271.7°0.0°
C23N2C26C31179.2°180.0°
N2C23H22H23118.5°120.0°
N2C23C24H24178.7°60.0°
N2C23C24H2561.4°60.0°
C22C20C21H1692.2°177.4°
C22C20C21H1727.7°57.4°
C22C20C21H18147.8°62.6°
C20C22H19H20120.0°120.0°
C20C22H19H21120.0°120.0°
C20C22H20H21120.0°120.0°
C24C25O2H26119.8°120.0°
C24C25O2H27119.9°120.0°
C24C25O2H15180.0°180.0°
C25C24C23H22179.1°60.0°
C25C24C23H2361.8°60.0°
C25C24H24H25119.8°120.0°
C24C25H26H27120.5°120.0°
O2C25C24H2465.1°60.0°
O2C25C24H25174.9°60.0°
O2C25H26H27120.5°120.0°
C6C5C4H36180.0°180.0°
C6C5C4N2172.6°177.8°
C6C5C4C29.5°2.2°
C5C6C7H389.9°0.1°
C5C4N2C2178.1°180.0°
C5C4N2C26178.7°180.0°
C5C4C2C164.3°61.6°
C5C4C2C31179.1°180.0°
C5C4C2C363.2°61.5°
C4C5C6H371.9°5.3°
C4N2C26C27179.3°180.0°
C4N2C26C310.3°0.0°
N2C4C2C1113.7°118.4°
N2C4C2C311.1°0.0°
N2C4C2C3118.8°118.5°
C4N2C23H22114.3°125.6°
C4N2C23H234.8°5.6°
N2C4C5H367.4°2.2°
C26N2C4C20.6°0.0°
N2C26C27C31179.0°180.0°
N2C26C27C28179.5°180.0°
N2C26C31C21.0°0.0°
N2C26C31C30179.5°180.0°
C26N2C23H2264.5°54.4°
C26N2C23H23176.5°174.4°
N2C26C27H280.6°0.0°
C4C2C31C261.2°0.0°
C4C2C1C31106.8°113.8°
C4C2C1C3128.9°123.2°
C4C2C31C3119.1°118.6°
C4C2C31C30179.4°180.0°
C4C2C1H1180.0°55.3°
C4C2C1H260.0°64.7°
C4C2C1H360.0°175.3°
C4C2C3H31180.0°62.4°
C4C2C3H3260.0°57.6°
C4C2C3H3360.0°177.6°
C2C4C5H36170.5°177.8°
C26C27C28H28180.0°180.0°
C27C26C31C2179.8°180.0°
C27C26C31C300.3°0.0°
C26C27C28C290.5°0.0°
C26C27C28H29179.5°180.0°
C31C26C27C280.5°0.0°
C26C31C2C1116.0°118.4°
C26C31C2C30179.4°180.0°
C26C31C2C3120.3°118.6°
C26C31C30C290.2°0.0°
C31C26C27H28179.5°180.0°
C26C31C30H34179.8°179.9°
C27C28C29H29180.0°180.0°
C27C28C29C300.4°0.0°
C27C28C29H30179.6°180.0°
C1C2C31C3123.7°122.9°
C1C2C31C3063.4°61.6°
C2C1H1H2120.0°120.0°
C2C1H1H3120.0°120.0°
C2C1H2H3120.0°120.0°
C1C2C3H3151.6°60.7°
C1C2C3H3268.4°179.3°
C1C2C3H33171.6°59.3°
C2C31C30C29179.6°180.0°
C31C2C1H173.2°58.5°
C31C2C1H246.8°178.6°
C31C2C1H3166.8°61.4°
C31C2C3H3171.4°176.3°
C31C2C3H32168.6°56.3°
C31C2C3H3348.6°63.7°
C2C31C30H340.4°0.1°
C3C2C31C3060.3°61.3°
C3C2C1H151.0°178.5°
C3C2C1H2171.0°58.4°
C3C2C1H368.9°61.6°
C2C3H31H32120.0°119.9°
C2C3H31H33120.0°120.0°
C2C3H32H33120.0°120.0°
C31C30C29C280.3°0.0°
C31C30C29H34180.0°180.0°
C31C30C29H30179.8°180.0°
C28C29C30H30180.0°180.0°
C29C28C27H28179.5°180.0°
C28C29C30H34179.7°179.9°
C30C29C28H29179.6°180.0°
H1C1H2H3120.0°120.0°
H4O1C13H959.7°60.1°
H4O1C13H1059.7°60.0°
H5C11C12H7153.7°179.9°
H5C11C12H887.1°60.1°
H6C11C12H786.4°60.0°
H6C11C12H832.7°180.0°
H7C12C13H9128.6°60.0°
H7C12C13H10112.0°180.0°
H8C12C13H99.5°180.0°
H8C12C13H10128.9°60.0°
H11C15C16H120.2°0.1°
H12C16C17H130.2°0.0°
H13C17C18H140.9°0.0°
H15O2C25H2660.2°60.0°
H15O2C25H2760.2°60.0°
H16C21H17H18120.0°120.0°
H19C22H20H21120.0°120.0°
H22C23C24H2460.9°180.0°
H22C23C24H2559.0°60.0°
H23C23C24H2458.2°60.0°
H23C23C24H25178.1°180.0°
H24C24C25H2654.7°60.0°
H24C24C25H27175.0°180.0°
H25C24C25H2665.2°180.0°
H25C24C25H2755.1°60.0°
H28C27C28H290.5°0.0°
H29C28C29H300.4°0.0°
H30C29C30H340.2°0.1°
H31C3H32H33120.0°120.1°
H36C5C6H37178.1°174.7°
H37C6C7H38170.1°180.0°
H38C7C8H39178.3°180.0°
H39C8C9H40173.5°180.0°

226262

PDB entries from 2024-10-16

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