5CR
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
CAA | CAL | sing | 1.51Å | 1.50Å | |
CAL | OAB | doub | 1.21Å | 1.24Å | |
CAL | N | sing | 1.35Å | 1.39Å | |
N | CA | sing | 1.47Å | 1.49Å | |
CA | C | sing | 1.51Å | 1.56Å | |
CA | CB | sing | 1.53Å | 1.56Å | |
C | OXT | sing | 1.34Å | 1.28Å | |
C | O | doub | 1.21Å | 1.26Å | |
CB | CG | sing | 1.51Å | 1.42Å | |
CG | CD1 | sing | 1.38Å | 1.39Å | Aromatic |
CG | CD2 | doub | 1.38Å | 1.40Å | Aromatic |
CD1 | CE1 | doub | 1.38Å | 1.40Å | Aromatic |
CE1 | CZ | sing | 1.38Å | 1.38Å | Aromatic |
CZ | CE2 | doub | 1.38Å | 1.39Å | Aromatic |
CE2 | CD2 | sing | 1.38Å | 1.40Å | Aromatic |
CAA | HAA1 | sing | 1.09Å | 1.10Å | |
CAA | HAA2 | sing | 1.09Å | 1.10Å | |
CAA | HAA3 | sing | 1.09Å | 1.10Å | |
N | H | sing | 0.97Å | 1.00Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | HB1C | sing | 1.09Å | 1.10Å | |
CB | HB2C | sing | 1.09Å | 1.10Å | |
OXT | HXT | sing | 0.97Å | 0.95Å | |
CD1 | HD1 | sing | 1.08Å | 1.08Å | |
CD2 | HD2 | sing | 1.08Å | 1.08Å | |
CE1 | HE1 | sing | 1.08Å | 1.08Å | |
CZ | HZ | sing | 1.08Å | 1.08Å | |
CE2 | HE2 | sing | 1.08Å | 1.08Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CAA | CAL | OAB | 119.2° | 120.1° |
CAA | CAL | N | 112.2° | 120.0° |
CAL | CAA | HAA1 | 109.5° | 109.4° |
CAL | CAA | HAA2 | 109.4° | 109.5° |
CAL | CAA | HAA3 | 109.4° | 109.5° |
OAB | CAL | N | 128.7° | 120.0° |
CAL | N | CA | 127.9° | 119.9° |
CAL | N | H | 116.1° | 120.0° |
N | CA | C | 111.3° | 109.5° |
N | CA | CB | 114.2° | 109.4° |
CA | N | H | 116.0° | 120.0° |
N | CA | HA | 106.6° | 109.5° |
C | CA | CB | 112.2° | 109.4° |
CA | C | OXT | 117.2° | 120.0° |
CA | C | O | 117.1° | 120.0° |
C | CA | HA | 105.9° | 109.5° |
CA | CB | CG | 106.8° | 109.5° |
CB | CA | HA | 105.9° | 109.5° |
CA | CB | HB1C | 110.2° | 109.5° |
CA | CB | HB2C | 110.1° | 109.5° |
OXT | C | O | 125.5° | 120.0° |
C | OXT | HXT | 109.5° | 117.0° |
CB | CG | CD1 | 122.9° | 120.0° |
CB | CG | CD2 | 119.8° | 120.0° |
CG | CB | HB1C | 110.1° | 109.5° |
CG | CB | HB2C | 110.1° | 109.5° |
CD1 | CG | CD2 | 117.3° | 120.0° |
CG | CD1 | CE1 | 120.7° | 120.0° |
CG | CD1 | HD1 | 119.6° | 120.0° |
CG | CD2 | CE2 | 121.6° | 120.0° |
CG | CD2 | HD2 | 119.2° | 120.0° |
CD1 | CE1 | CZ | 122.3° | 120.0° |
CE1 | CD1 | HD1 | 119.7° | 120.0° |
CD1 | CE1 | HE1 | 118.8° | 120.0° |
CE1 | CZ | CE2 | 117.5° | 120.0° |
CZ | CE1 | HE1 | 118.9° | 120.0° |
CE1 | CZ | HZ | 121.3° | 120.0° |
CZ | CE2 | CD2 | 120.7° | 120.0° |
CE2 | CZ | HZ | 121.3° | 120.0° |
CZ | CE2 | HE2 | 119.7° | 120.0° |
CE2 | CD2 | HD2 | 119.2° | 120.0° |
CD2 | CE2 | HE2 | 119.7° | 119.9° |
HAA1 | CAA | HAA2 | 109.4° | 109.4° |
HAA1 | CAA | HAA3 | 109.5° | 109.5° |
HAA2 | CAA | HAA3 | 109.5° | 109.5° |
HB1C | CB | HB2C | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CAA | CAL | OAB | N | 179.7° | 179.9° |
CAA | CAL | N | CA | 178.9° | 180.0° |
CAL | CAA | HAA1 | HAA2 | 120.0° | 120.0° |
CAL | CAA | HAA1 | HAA3 | 120.0° | 120.0° |
CAL | CAA | HAA2 | HAA3 | 120.0° | 120.1° |
CAA | CAL | N | H | 1.1° | 0.0° |
OAB | CAL | N | CA | 1.4° | 0.1° |
OAB | CAL | CAA | HAA1 | 0.0° | 0.1° |
OAB | CAL | CAA | HAA2 | 120.0° | 120.0° |
OAB | CAL | CAA | HAA3 | 120.0° | 119.9° |
OAB | CAL | N | H | 178.6° | 179.9° |
CAL | N | CA | H | 180.0° | 180.0° |
CAL | N | CA | C | 57.3° | 85.0° |
CAL | N | CA | CB | 71.1° | 155.0° |
N | CAL | CAA | HAA1 | 179.7° | 180.0° |
N | CAL | CAA | HAA2 | 60.3° | 60.1° |
N | CAL | CAA | HAA3 | 59.7° | 60.0° |
CAL | N | CA | HA | 172.3° | 35.1° |
N | CA | C | CB | 129.5° | 119.9° |
N | CA | C | HA | 115.5° | 120.1° |
N | CA | CB | HA | 117.0° | 120.0° |
N | CA | C | OXT | 163.1° | 180.0° |
N | CA | C | O | 20.5° | 0.1° |
N | CA | CB | CG | 82.8° | 65.0° |
N | CA | CB | HB1C | 36.8° | 55.0° |
N | CA | CB | HB2C | 157.6° | 175.0° |
C | CA | CB | HA | 115.0° | 120.1° |
CA | C | OXT | O | 176.1° | 179.9° |
C | CA | CB | CG | 149.3° | 175.0° |
C | CA | N | H | 122.7° | 94.9° |
C | CA | CB | HB1C | 91.1° | 65.0° |
C | CA | CB | HB2C | 29.7° | 55.0° |
CA | C | OXT | HXT | 176.1° | 179.9° |
CB | CA | C | OXT | 33.6° | 60.1° |
CB | CA | C | O | 149.9° | 120.0° |
CA | CB | CG | HB1C | 119.6° | 120.0° |
CA | CB | CG | HB2C | 119.6° | 120.0° |
CA | CB | CG | CD1 | 109.2° | 90.0° |
CA | CB | CG | CD2 | 71.4° | 90.3° |
CB | CA | N | H | 108.8° | 25.0° |
CA | CB | HB1C | HB2C | 121.2° | 120.0° |
OXT | C | CA | HA | 81.4° | 60.0° |
O | C | CA | HA | 95.0° | 120.0° |
O | C | OXT | HXT | 0.0° | 0.0° |
CB | CG | CD1 | CD2 | 179.5° | 179.7° |
CB | CG | CD1 | CE1 | 178.9° | 180.0° |
CB | CG | CD2 | CE2 | 179.0° | 179.8° |
CG | CB | CA | HA | 34.2° | 55.0° |
CG | CB | HB1C | HB2C | 121.2° | 120.0° |
CB | CG | CD1 | HD1 | 1.1° | 0.1° |
CB | CG | CD2 | HD2 | 1.0° | 0.0° |
CG | CD1 | CE1 | HD1 | 180.0° | 179.9° |
CG | CD1 | CE1 | CZ | 0.2° | 0.0° |
CD1 | CG | CD2 | CE2 | 1.5° | 0.5° |
CD1 | CG | CB | HB1C | 10.4° | 30.0° |
CD1 | CG | CB | HB2C | 131.3° | 150.0° |
CD1 | CG | CD2 | HD2 | 178.5° | 179.7° |
CG | CD1 | CE1 | HE1 | 179.8° | 179.9° |
CD2 | CG | CD1 | CE1 | 1.6° | 0.3° |
CG | CD2 | CE2 | CZ | 0.0° | 0.4° |
CG | CD2 | CE2 | HD2 | 180.0° | 179.8° |
CD2 | CG | CB | HB1C | 169.0° | 149.7° |
CD2 | CG | CB | HB2C | 48.2° | 29.7° |
CD2 | CG | CD1 | HD1 | 178.4° | 179.7° |
CG | CD2 | CE2 | HE2 | 179.9° | 179.7° |
CD1 | CE1 | CZ | HE1 | 180.0° | 179.9° |
CD1 | CE1 | CZ | CE2 | 1.3° | 0.0° |
CD1 | CE1 | CZ | HZ | 178.7° | 180.0° |
CE1 | CZ | CE2 | HZ | 180.0° | 180.0° |
CE1 | CZ | CE2 | CD2 | 1.5° | 0.1° |
CZ | CE1 | CD1 | HD1 | 179.8° | 180.0° |
CE1 | CZ | CE2 | HE2 | 178.5° | 180.0° |
CZ | CE2 | CD2 | HE2 | 180.0° | 179.9° |
CZ | CE2 | CD2 | HD2 | 179.9° | 179.8° |
CE2 | CZ | CE1 | HE1 | 178.7° | 180.0° |
CD2 | CE2 | CZ | HZ | 178.6° | 179.8° |
HAA1 | CAA | HAA2 | HAA3 | 120.0° | 120.0° |
H | N | CA | HA | 7.7° | 145.0° |
HA | CA | CB | HB1C | 153.8° | 175.0° |
HA | CA | CB | HB2C | 85.4° | 65.1° |
HD1 | CD1 | CE1 | HE1 | 0.2° | 0.0° |
HD2 | CD2 | CE2 | HE2 | 0.1° | 0.1° |
HE1 | CE1 | CZ | HZ | 1.3° | 0.0° |
HZ | CZ | CE2 | HE2 | 1.5° | 0.0° |