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5BY

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N36N37doub1.29Å1.40ÅAromatic
N36N35sing1.29Å1.40ÅAromatic
N37C32sing1.35Å1.34ÅAromatic
N35C38sing1.47Å1.45Å
N35C33sing1.35Å1.32ÅAromatic
C38C39sing1.53Å1.53Å
C39O40sing1.43Å1.42Å
C32C33doub1.37Å1.37ÅAromatic
C32C31sing1.48Å1.49Å
C31C3doub1.32Å1.33Å
O40C41sing1.43Å1.42Å
C3C2sing1.51Å1.50Å
C2C7sing1.51Å1.49Å
C16C17doub1.38Å1.37ÅAromatic
C16C15sing1.38Å1.36ÅAromatic
C7O8doub1.21Å1.18Å
C7N9sing1.35Å1.31Å
C17C12sing1.38Å1.37ÅAromatic
C15C14doub1.38Å1.37ÅAromatic
N9C10sing1.46Å1.43Å
C12C11sing1.51Å1.49Å
C12C13doub1.38Å1.36ÅAromatic
C14C13sing1.38Å1.37ÅAromatic
C10C11sing1.53Å1.50Å
C10C18sing1.51Å1.48Å
O19C18doub1.21Å1.18Å
C18N20sing1.35Å1.31Å
C25C23sing1.53Å1.49Å
N20C21sing1.46Å1.44Å
C23C24sing1.53Å1.50Å
C23C22sing1.53Å1.49Å
C21C22sing1.53Å1.50Å
C21B8sing1.57Å1.58Å
O28B8sing1.42Å1.52Å
B8O27sing1.42Å1.50Å
C10H1sing1.09Å1.10Å
C13H2sing1.08Å1.08Å
C15H3sing1.08Å1.08Å
C17H4sing1.08Å1.08Å
C21H5sing1.09Å1.10Å
C22H6sing1.09Å1.10Å
C22H7sing1.09Å1.10Å
C24H8sing1.09Å1.10Å
C24H9sing1.09Å1.10Å
C24H10sing1.09Å1.10Å
C2H11sing1.09Å1.10Å
C2H12sing1.09Å1.10Å
C3H13sing1.08Å1.08Å
C31H14sing1.08Å1.08Å
C33H15sing1.08Å1.08Å
C38H16sing1.09Å1.10Å
C38H17sing1.09Å1.10Å
C39H18sing1.09Å1.10Å
C39H19sing1.09Å1.10Å
C41H20sing1.09Å1.10Å
C41H21sing1.09Å1.10Å
N9H23sing0.97Å1.00Å
C11H24sing1.09Å1.10Å
C11H25sing1.09Å1.10Å
C16H26sing1.08Å1.08Å
C14H27sing1.08Å1.08Å
N20H28sing0.97Å1.00Å
C23H29sing1.09Å1.10Å
C25H30sing1.09Å1.10Å
C25H31sing1.09Å1.10Å
C25H32sing1.09Å1.10Å
O27H33sing0.97Å0.95Å
O28H34sing0.97Å0.95Å
C41C1sing1.53Å148.48Å
C1O1sing1.43Å0.00Å
O1C5sing1.43Å0.00Å
C5C6sing1.53Å0.00Å
C6O2sing1.43Å0.00Å
O2C9sing1.43Å0.00Å
C9C19sing1.51Å0.00Å
C19O3sing1.34Å0.00Å
C19O4doub1.21Å0.00Å
C1H22sing1.09Å0.00Å
C1H35sing1.09Å0.00Å
C5H36sing1.09Å0.00Å
C5H37sing1.09Å0.00Å
C6H38sing1.09Å0.00Å
C6H39sing1.09Å0.00Å
C9H40sing1.09Å0.00Å
C9H41sing1.09Å0.00Å
O3H42sing0.97Å0.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N37N36N35106.2°110.6°
N36N37C32103.7°108.8°
N36N35C38117.2°125.7°
N36N35C33112.0°108.5°
N37C32C33115.0°106.1°
N37C32C31124.2°126.9°
C38N35C33130.9°125.8°
N35C38C39112.0°109.5°
N35C38H16108.8°109.5°
N35C38H17108.8°109.4°
N35C33C32103.1°106.1°
N35C33H15128.5°127.0°
C38C39O40112.8°109.5°
C39C38H16108.8°109.5°
C39C38H17108.8°109.5°
C38C39H18108.6°109.5°
C38C39H19108.6°109.5°
C39O40C41113.3°114.0°
O40C39H18108.6°109.5°
O40C39H19108.6°109.4°
C33C32C31120.8°127.0°
C32C33H15128.5°127.0°
C32C31C3119.1°120.0°
C32C31H14120.4°119.9°
C31C3C2123.9°120.0°
C31C3H13118.1°120.0°
C3C31H14120.5°120.0°
O40C41H20111.0°109.5°
O40C41H21111.0°109.5°
O40C41C1103.4°109.5°
C3C2C7106.6°109.5°
C3C2H11110.2°109.5°
C3C2H12110.2°109.5°
C2C3H13118.1°120.0°
C2C7O8119.3°120.0°
C2C7N9118.6°120.0°
C7C2H11110.2°109.5°
C7C2H12110.2°109.5°
C17C16C15119.9°120.0°
C16C17C12120.8°120.0°
C16C17H4119.6°120.0°
C17C16H26120.1°120.0°
C16C15C14119.2°120.0°
C16C15H3120.4°120.0°
C15C16H26120.0°120.0°
O8C7N9122.1°120.0°
C7N9C10122.6°120.0°
C7N9H23118.7°120.0°
C17C12C11120.7°120.0°
C17C12C13119.2°120.0°
C12C17H4119.6°120.0°
C15C14C13121.0°120.0°
C14C15H3120.4°120.0°
C15C14H27119.5°120.0°
N9C10C11107.2°109.5°
N9C10C18111.9°109.5°
N9C10H1110.1°109.5°
C10N9H23118.7°120.0°
C11C12C13120.0°120.0°
C12C11C10104.0°109.5°
C12C11H24110.8°109.5°
C12C11H25110.8°109.5°
C12C13C14119.9°120.0°
C12C13H2120.1°120.0°
C14C13H2120.0°120.0°
C13C14H27119.5°120.0°
C11C10C18109.3°109.5°
C11C10H1109.0°109.5°
C10C11H24110.8°109.5°
C10C11H25110.8°109.4°
C10C18O19119.3°120.0°
C10C18N20119.0°120.1°
C18C10H1109.3°109.4°
O19C18N20121.7°120.0°
C18N20C21121.8°120.0°
C18N20H28119.1°120.0°
C25C23C24109.9°109.5°
C25C23C22107.7°109.5°
C25C23H29110.0°109.5°
C23C25H30109.5°109.5°
C23C25H31109.5°109.5°
C23C25H32109.5°109.5°
N20C21C22108.9°109.5°
N20C21B8114.0°109.5°
N20C21H5110.5°109.5°
C21N20H28119.1°120.0°
C24C23C22109.2°109.5°
C23C24H8109.5°109.5°
C23C24H9109.5°109.4°
C23C24H10109.5°109.5°
C24C23H29109.9°109.5°
C23C22C21112.2°109.5°
C23C22H6108.8°109.5°
C23C22H7108.8°109.5°
C22C23H29110.0°109.5°
C22C21B8104.9°109.5°
C22C21H5109.6°109.4°
C21C22H6108.8°109.5°
C21C22H7108.8°109.4°
C21B8O28102.8°120.0°
C21B8O27119.7°120.0°
B8C21H5108.6°109.5°
O28B8O2798.7°120.0°
B8O28H34109.5°114.0°
B8O27H33109.5°114.0°
H6C22H7109.4°109.5°
H8C24H9109.5°109.5°
H8C24H10109.4°109.5°
H9C24H10109.5°109.5°
H11C2H12109.4°109.4°
H16C38H17109.5°109.5°
H18C39H19109.5°109.5°
H20C41H21109.4°109.5°
H20C41C1111.0°109.4°
H21C41C1111.0°109.5°
H24C11H25109.5°109.5°
H30C25H31109.5°109.4°
H30C25H32109.5°109.5°
H31C25H32109.5°109.5°
C41C1O190.0°109.5°
C41C1H2290.0°109.5°
C41C1H3590.0°109.5°
C1O1C590.0°114.0°
O1C1H2290.0°109.5°
O1C1H3590.0°109.5°
O1C5C690.0°109.4°
O1C5H3690.0°109.5°
O1C5H3790.0°109.5°
C5C6O290.0°109.5°
C6C5H3690.0°109.5°
C6C5H3790.0°109.5°
C5C6H3890.0°109.5°
C5C6H3990.0°109.5°
C6O2C990.0°114.0°
O2C6H3890.0°109.5°
O2C6H3990.0°109.5°
O2C9C1990.0°109.5°
O2C9H4090.0°109.5°
O2C9H4190.0°109.5°
C9C19O390.0°120.0°
C9C19O490.0°120.0°
C19C9H4090.0°109.4°
C19C9H4190.0°109.5°
O3C19O490.0°120.1°
C19O3H4290.0°117.0°
H22C1H3590.0°109.5°
H36C5H3790.0°109.5°
H38C6H3990.0°109.5°
H40C9H4190.0°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N37N36N35C38179.5°179.7°
N37N36N35C330.4°0.3°
N36N37C32C330.8°0.4°
N36N37C32C31179.6°179.9°
N35N36N37C320.7°0.4°
N36N35C38C33179.9°180.0°
N36N35C38C39100.8°55.0°
N36N35C33C320.0°0.0°
N36N35C33H15179.9°180.0°
N36N35C38H1619.6°65.0°
N36N35C38H17138.9°175.0°
N37C32C33N350.5°0.3°
N37C32C33C31179.6°179.7°
N37C32C31C3167.0°0.3°
N37C32C31H1413.0°179.7°
N37C32C33H15179.4°179.8°
N35C38C39H16120.4°120.0°
N35C38C39H17120.4°119.9°
N35C38C39O4056.9°180.0°
C38N35C33C32180.0°180.0°
C38N35C33H150.0°0.0°
N35C38H16H17118.8°119.9°
N35C38C39H1863.6°60.0°
N35C38C39H19177.3°60.1°
C33N35C38C3979.2°125.0°
N35C33C32H15180.0°180.0°
N35C33C32C31179.9°180.0°
C33N35C38H16160.5°115.0°
C33N35C38H1741.2°5.0°
C38C39O40H18120.5°120.1°
C38C39O40H19120.5°120.0°
C38C39O40C41124.5°180.0°
C39C38H16H17118.8°120.0°
C38C39H18H19118.5°120.0°
O40C39C38H16177.3°59.9°
O40C39C38H1763.5°60.1°
O40C39H18H19118.5°119.9°
C39O40C41H2025.6°60.0°
C39O40C41H21147.5°60.0°
C39O40C41C193.5°180.0°
C33C32C31C313.4°180.0°
C33C32C31H14166.5°0.0°
C32C31C3H14180.0°180.0°
C32C31C3C2179.4°180.0°
C32C31C3H130.6°0.0°
C31C32C33H150.2°0.0°
C31C3C2H13180.0°179.9°
C31C3C2C7169.5°125.0°
C31C3C2H1170.9°5.0°
C31C3C2H1249.9°115.0°
C41O40C39H18115.1°60.0°
C41O40C39H194.0°60.0°
O40C41H20H21122.8°120.0°
O40C41H20C1114.4°120.0°
O40C41H21C1114.4°120.0°
O40C41C1O190.0°65.0°
O40C41C1H2290.0°175.0°
O40C41C1H3590.0°55.0°
C3C2C7H11119.6°120.1°
C3C2C7H12119.6°120.0°
C3C2C7O873.9°0.0°
C3C2C7N9105.9°179.7°
C3C2H11H12121.3°120.0°
C2C3C31H140.6°0.0°
C2C7O8N9179.8°179.7°
C2C7N9C10176.5°179.7°
C7C2H11H12121.3°120.0°
C7C2C3H1310.5°54.9°
C2C7N9H233.5°0.3°
C17C16C15H26180.0°179.7°
C16C17C12H4180.0°179.9°
C17C16C15C140.3°0.3°
C16C17C12C11179.5°180.0°
C16C17C12C130.4°0.1°
C17C16C15H3179.7°179.7°
C15C16C17C120.1°0.2°
C16C15C14H3180.0°180.0°
C16C15C14C130.4°0.1°
C15C16C17H4179.9°179.7°
C16C15C14H27179.6°180.0°
O8C7N9C103.7°0.0°
O8C7C2H11166.5°120.0°
O8C7C2H1245.7°120.0°
O8C7N9H23176.3°180.0°
C7N9C10H23180.0°180.0°
C7N9C10C11127.6°85.0°
C7N9C10C18112.6°155.0°
C7N9C10H19.2°35.1°
N9C7C2H1113.6°59.7°
N9C7C2H12134.5°60.3°
C17C12C11C13179.1°179.9°
C17C12C13C140.3°0.4°
C17C12C11C1099.8°89.9°
C17C12C13H2179.7°180.0°
C17C12C11H24141.1°30.1°
C17C12C11H2519.3°150.1°
C12C17C16H26179.9°179.9°
C15C14C13C120.1°0.3°
C15C14C13H27180.0°179.9°
C15C14C13H2179.9°179.9°
C14C15C16H26179.7°179.9°
N9C10C11C1270.0°65.0°
N9C10C11C18121.5°120.0°
N9C10C11H1119.1°120.0°
N9C10C18H1122.2°120.0°
N9C10C18O1923.2°0.0°
N9C10C18N20156.5°180.0°
N9C10C11H24170.8°55.0°
N9C10C11H2549.1°175.0°
C11C12C13C14179.4°179.8°
C12C11C10H24119.1°120.0°
C12C11C10H25119.1°120.0°
C12C11C10C18168.5°174.9°
C12C11C10H149.1°55.0°
C11C12C13H20.6°0.1°
C11C12C17H40.5°0.1°
C12C11H24H25122.5°120.0°
C12C13C14H2180.0°179.7°
C13C12C11C1079.3°89.9°
C13C12C17H4179.6°180.0°
C13C12C11H2439.9°150.1°
C13C12C11H25161.6°30.1°
C12C13C14H27179.9°179.7°
C13C14C15H3179.6°180.0°
C11C10C18H1119.2°120.0°
C11C10C18O1995.4°120.0°
C11C10C18N2085.0°60.0°
C11C10N9H2352.4°95.0°
C10C11H24H25122.5°120.0°
C10C18O19N20179.7°180.0°
C10C18N20C21171.7°180.0°
C18C10N9H2367.4°25.0°
C18C10C11H2449.4°65.0°
C18C10C11H2572.4°54.9°
C10C18N20H288.3°0.0°
O19C18N20C218.6°0.0°
O19C18C10H1145.4°120.0°
O19C18N20H28171.3°180.0°
C18N20C21H28180.0°180.0°
C18N20C21C22124.4°135.0°
C18N20C21B8118.8°105.0°
N20C18C10H134.3°60.0°
C18N20C21H53.9°15.0°
C25C23C24C22118.0°120.0°
C25C23C24H29121.2°120.0°
C25C23C22H29119.9°120.0°
C25C23C22C2180.7°174.2°
C25C23C22H639.7°65.7°
C25C23C22H7158.8°54.3°
C25C23C24H8180.0°60.0°
C25C23C24H960.0°60.1°
C25C23C24H1060.0°180.0°
C23C25H30H31120.0°120.0°
C23C25H30H32120.0°120.0°
C23C25H31H32120.0°120.0°
N20C21C22C2343.3°173.6°
N20C21C22B8122.5°120.1°
N20C21C22H5121.1°120.0°
N20C21B8H5123.7°120.0°
N20C21B8O2864.8°144.5°
N20C21B8O2743.1°35.4°
N20C21C22H6163.8°53.6°
N20C21C22H777.1°66.4°
C24C23C22H29120.7°120.1°
C24C23C22C21159.9°65.8°
C24C23C22H679.7°54.2°
C24C23C22H739.5°174.2°
C23C24H8H9120.0°120.0°
C23C24H8H10120.0°120.0°
C23C24H9H10120.0°119.9°
C24C23C25H30180.0°60.0°
C24C23C25H3160.0°180.0°
C24C23C25H3260.0°60.0°
C23C22C21H6120.4°120.0°
C23C22C21H7120.4°120.0°
C23C22C21B8165.8°66.3°
C23C22C21H577.7°53.6°
C23C22H6H7118.7°120.0°
C22C23C24H862.0°60.0°
C22C23C24H958.0°180.0°
C22C23C24H10178.0°60.0°
C22C23C25H3061.1°60.0°
C22C23C25H31178.9°60.0°
C22C23C25H3259.0°180.0°
C22C21B8H5117.2°120.0°
C22C21B8O28176.1°24.5°
C22C21B8O2775.9°155.4°
C21C22H6H7118.7°119.9°
C22C21N20H2855.6°45.0°
C21C22C23H2939.2°54.2°
C21B8O28O27123.3°179.9°
B8C21C22H673.8°173.6°
B8C21C22H745.4°53.7°
B8C21N20H2861.2°75.0°
C21B8O27H33180.0°180.0°
C21B8O28H34180.0°180.0°
O28B8C21H558.9°95.5°
O28B8O27H3369.8°0.1°
O27B8C21H5166.9°84.6°
O27B8O28H3456.7°0.1°
H1C10N9H23170.8°145.0°
H1C10C11H2470.1°175.0°
H1C10C11H25168.2°65.0°
H2C13C14H270.0°0.0°
H3C15C16H260.3°0.0°
H3C15C14H270.4°0.0°
H4C17C16H260.1°0.1°
H5C21C22H642.7°66.4°
H5C21C22H7161.8°173.6°
H5C21N20H28176.1°165.0°
H6C22C23H29159.6°174.3°
H7C22C23H2981.2°65.7°
H8C24H9H10120.0°120.0°
H8C24C23H2958.8°180.0°
H9C24C23H29178.8°60.0°
H10C24C23H2961.2°60.0°
H11C2C3H13109.1°175.0°
H12C2C3H13130.1°65.0°
H13C3C31H14179.4°179.9°
H16C38C39H1856.8°180.0°
H16C38C39H1962.3°60.0°
H17C38C39H18176.0°60.0°
H17C38C39H1956.9°180.0°
H20C41H21C1122.8°119.9°
H20C41C1O190.0°55.0°
H20C41C1H2290.0°65.0°
H20C41C1H3590.0°175.0°
H21C41C1O190.0°175.0°
H21C41C1H2290.0°55.0°
H21C41C1H3590.0°65.1°
H29C23C25H3058.9°179.9°
H29C23C25H3161.1°60.0°
H29C23C25H32178.9°60.0°
H30C25H31H32120.0°120.0°
C41C1O1H2290.0°120.0°
C41C1O1H3590.0°120.0°
C41C1O1C590.0°180.0°
C41C1H22H3590.0°120.0°
C1O1C5C690.0°180.0°
O1C1H22H3590.0°120.0°
C1O1C5H3690.0°60.0°
C1O1C5H3790.0°60.0°
O1C5C6H3690.0°120.0°
O1C5C6H3790.0°120.0°
O1C5C6O290.0°65.0°
C5O1C1H2290.0°60.0°
C5O1C1H3590.0°60.0°
O1C5H36H3790.0°120.0°
O1C5C6H3890.0°175.0°
O1C5C6H3990.0°55.0°
C5C6O2H3890.0°120.0°
C5C6O2H3990.0°120.0°
C5C6O2C990.0°180.0°
C6C5H36H3790.0°120.0°
C5C6H38H3990.0°120.0°
C6O2C9C1990.0°180.0°
O2C6C5H3690.0°55.0°
O2C6C5H3790.0°175.0°
O2C6H38H3990.0°120.0°
C6O2C9H4090.0°60.0°
C6O2C9H4190.0°60.0°
O2C9C19H4090.0°120.0°
O2C9C19H4190.0°120.0°
O2C9C19O390.0°180.0°
O2C9C19O490.0°0.0°
C9O2C6H3890.0°60.0°
C9O2C6H3990.0°60.0°
O2C9H40H4190.0°120.0°
C9C19O3O490.0°179.9°
C19C9H40H4190.0°120.0°
C9C19O3H4290.0°180.0°
O3C19C9H4090.0°60.0°
O3C19C9H4190.0°60.0°
O4C19C9H4090.0°120.0°
O4C19C9H4190.0°120.1°
O4C19O3H4290.0°0.0°
H36C5C6H3890.0°65.0°
H36C5C6H3990.0°175.0°
H37C5C6H3890.0°55.0°
H37C5C6H3990.0°65.0°

222415

PDB entries from 2024-07-10

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