5BJ
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O18 | C13 | doub | 1.22Å | 1.22Å | |
C13 | O17 | sing | 1.35Å | 1.34Å | |
C13 | C9 | sing | 1.47Å | 1.47Å | |
C9 | C4 | doub | 1.36Å | 1.34Å | Aromatic |
C9 | N7 | sing | 1.38Å | 1.31Å | Aromatic |
C4 | C1 | sing | 1.41Å | 1.51Å | Aromatic |
C16 | C19 | doub | 1.36Å | 1.40Å | Aromatic |
C16 | C11 | sing | 1.39Å | 1.40Å | Aromatic |
C19 | C14 | sing | 1.41Å | 1.41Å | Aromatic |
N7 | C3 | sing | 1.38Å | 1.35Å | Aromatic |
C11 | C5 | doub | 1.39Å | 1.41Å | Aromatic |
C1 | C3 | doub | 1.41Å | 1.39Å | Aromatic |
C1 | C2 | sing | 1.41Å | 1.41Å | Aromatic |
C14 | C20 | doub | 1.40Å | 1.41Å | Aromatic |
C14 | C10 | sing | 1.42Å | 1.43Å | Aromatic |
C5 | C10 | sing | 1.42Å | 1.43Å | Aromatic |
C5 | C2 | sing | 1.48Å | 1.50Å | |
C20 | C22 | sing | 1.36Å | 1.40Å | Aromatic |
C3 | C8 | sing | 1.39Å | 1.40Å | Aromatic |
C10 | C15 | doub | 1.40Å | 1.42Å | Aromatic |
C2 | C6 | doub | 1.39Å | 1.42Å | Aromatic |
C22 | C21 | doub | 1.39Å | 1.40Å | Aromatic |
C15 | C21 | sing | 1.36Å | 1.40Å | Aromatic |
C8 | C12 | doub | 1.38Å | 1.41Å | Aromatic |
C6 | C12 | sing | 1.39Å | 1.42Å | Aromatic |
C11 | H1 | sing | 1.08Å | 1.08Å | |
C12 | H2 | sing | 1.08Å | 1.08Å | |
C15 | H3 | sing | 1.08Å | 1.08Å | |
C16 | H4 | sing | 1.08Å | 1.08Å | |
C19 | H5 | sing | 1.08Å | 1.08Å | |
C20 | H6 | sing | 1.08Å | 1.08Å | |
C21 | H7 | sing | 1.08Å | 1.08Å | |
C22 | H8 | sing | 1.08Å | 1.08Å | |
C4 | H9 | sing | 1.08Å | 1.08Å | |
C6 | H10 | sing | 1.08Å | 1.08Å | |
N7 | H11 | sing | 0.97Å | 1.00Å | |
C8 | H12 | sing | 1.08Å | 1.08Å | |
O17 | H13 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O18 | C13 | O17 | 121.5° | 120.1° |
O18 | C13 | C9 | 119.7° | 120.0° |
O17 | C13 | C9 | 118.8° | 120.0° |
C13 | O17 | H13 | 109.5° | 116.9° |
C13 | C9 | C4 | 126.4° | 125.5° |
C13 | C9 | N7 | 123.1° | 125.4° |
C4 | C9 | N7 | 110.5° | 109.1° |
C9 | C4 | C1 | 105.9° | 107.7° |
C9 | C4 | H9 | 127.1° | 126.2° |
C9 | N7 | C3 | 111.6° | 108.7° |
C9 | N7 | H11 | 124.2° | 125.7° |
C4 | C1 | C3 | 103.2° | 107.1° |
C4 | C1 | C2 | 134.8° | 133.3° |
C1 | C4 | H9 | 127.0° | 126.1° |
C19 | C16 | C11 | 119.2° | 121.2° |
C16 | C19 | C14 | 120.8° | 120.1° |
C19 | C16 | H4 | 120.4° | 119.4° |
C16 | C19 | H5 | 119.6° | 119.9° |
C16 | C11 | C5 | 121.5° | 120.7° |
C16 | C11 | H1 | 119.3° | 119.7° |
C11 | C16 | H4 | 120.4° | 119.4° |
C19 | C14 | C20 | 119.4° | 121.2° |
C19 | C14 | C10 | 120.2° | 119.5° |
C14 | C19 | H5 | 119.6° | 120.0° |
N7 | C3 | C1 | 108.9° | 107.4° |
N7 | C3 | C8 | 129.2° | 133.0° |
C3 | N7 | H11 | 124.2° | 125.6° |
C11 | C5 | C10 | 119.7° | 119.2° |
C11 | C5 | C2 | 115.7° | 120.4° |
C5 | C11 | H1 | 119.3° | 119.6° |
C3 | C1 | C2 | 122.0° | 119.6° |
C1 | C3 | C8 | 122.0° | 119.6° |
C1 | C2 | C5 | 121.6° | 120.3° |
C1 | C2 | C6 | 116.3° | 119.4° |
C20 | C14 | C10 | 120.4° | 119.3° |
C14 | C20 | C22 | 120.2° | 119.7° |
C14 | C20 | H6 | 119.9° | 120.2° |
C14 | C10 | C5 | 118.6° | 119.3° |
C14 | C10 | C15 | 117.7° | 119.5° |
C10 | C5 | C2 | 124.6° | 120.4° |
C5 | C10 | C15 | 123.7° | 121.2° |
C5 | C2 | C6 | 122.1° | 120.2° |
C20 | C22 | C21 | 120.0° | 120.9° |
C22 | C20 | H6 | 119.9° | 120.1° |
C20 | C22 | H8 | 120.0° | 119.6° |
C3 | C8 | C12 | 117.1° | 120.3° |
C3 | C8 | H12 | 121.5° | 119.8° |
C10 | C15 | C21 | 121.7° | 119.6° |
C10 | C15 | H3 | 119.2° | 120.2° |
C2 | C6 | C12 | 121.7° | 120.3° |
C2 | C6 | H10 | 119.2° | 119.9° |
C22 | C21 | C15 | 119.9° | 121.0° |
C22 | C21 | H7 | 120.1° | 119.5° |
C21 | C22 | H8 | 120.0° | 119.5° |
C21 | C15 | H3 | 119.1° | 120.2° |
C15 | C21 | H7 | 120.0° | 119.5° |
C8 | C12 | C6 | 120.9° | 120.8° |
C8 | C12 | H2 | 119.6° | 119.6° |
C12 | C8 | H12 | 121.4° | 119.9° |
C6 | C12 | H2 | 119.6° | 119.6° |
C12 | C6 | H10 | 119.1° | 119.8° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O18 | C13 | O17 | C9 | 177.7° | 180.0° |
O18 | C13 | C9 | C4 | 129.6° | 0.0° |
O18 | C13 | C9 | N7 | 54.5° | 179.7° |
O18 | C13 | O17 | H13 | 0.0° | 0.0° |
O17 | C13 | C9 | C4 | 52.6° | 180.0° |
O17 | C13 | C9 | N7 | 123.2° | 0.3° |
C13 | C9 | C4 | N7 | 176.3° | 179.8° |
C13 | C9 | C4 | C1 | 177.2° | 180.0° |
C13 | C9 | N7 | C3 | 176.9° | 179.9° |
C13 | C9 | C4 | H9 | 2.8° | 0.0° |
C13 | C9 | N7 | H11 | 3.1° | 0.2° |
C9 | C13 | O17 | H13 | 177.7° | 180.0° |
C9 | C4 | C1 | H9 | 180.0° | 180.0° |
C4 | C9 | N7 | C3 | 0.5° | 0.3° |
C9 | C4 | C1 | C3 | 1.0° | 0.0° |
C9 | C4 | C1 | C2 | 178.1° | 179.8° |
C4 | C9 | N7 | H11 | 179.5° | 179.9° |
N7 | C9 | C4 | C1 | 0.9° | 0.2° |
C9 | N7 | C3 | H11 | 180.0° | 179.8° |
C9 | N7 | C3 | C1 | 0.2° | 0.3° |
C9 | N7 | C3 | C8 | 179.7° | 179.6° |
N7 | C9 | C4 | H9 | 179.1° | 179.8° |
C4 | C1 | C3 | N7 | 0.7° | 0.1° |
C4 | C1 | C3 | C2 | 177.6° | 179.8° |
C4 | C1 | C2 | C5 | 1.7° | 0.3° |
C4 | C1 | C3 | C8 | 179.7° | 179.7° |
C4 | C1 | C2 | C6 | 178.8° | 179.7° |
C19 | C16 | C11 | H4 | 180.0° | 180.0° |
C16 | C19 | C14 | H5 | 180.0° | 180.0° |
C19 | C16 | C11 | C5 | 0.4° | 0.0° |
C16 | C19 | C14 | C20 | 179.1° | 179.7° |
C16 | C19 | C14 | C10 | 1.1° | 0.3° |
C19 | C16 | C11 | H1 | 179.6° | 179.7° |
C11 | C16 | C19 | C14 | 1.4° | 0.0° |
C16 | C11 | C5 | H1 | 180.0° | 179.7° |
C16 | C11 | C5 | C10 | 0.8° | 0.3° |
C16 | C11 | C5 | C2 | 179.2° | 179.7° |
C11 | C16 | C19 | H5 | 178.6° | 180.0° |
C19 | C14 | C20 | C10 | 179.8° | 179.4° |
C19 | C14 | C10 | C5 | 0.1° | 0.6° |
C19 | C14 | C20 | C22 | 179.6° | 179.5° |
C19 | C14 | C10 | C15 | 179.5° | 180.0° |
C14 | C19 | C16 | H4 | 178.6° | 180.0° |
C19 | C14 | C20 | H6 | 0.4° | 0.6° |
N7 | C3 | C1 | C8 | 179.6° | 179.9° |
N7 | C3 | C1 | C2 | 178.3° | 180.0° |
N7 | C3 | C8 | C12 | 180.0° | 179.9° |
N7 | C3 | C8 | H12 | 0.0° | 0.1° |
C11 | C5 | C2 | C1 | 123.6° | 115.0° |
C11 | C5 | C10 | C14 | 1.0° | 0.6° |
C11 | C5 | C10 | C2 | 178.3° | 180.0° |
C11 | C5 | C10 | C15 | 179.6° | 180.0° |
C11 | C5 | C2 | C6 | 55.9° | 65.0° |
C5 | C11 | C16 | H4 | 179.5° | 180.0° |
C3 | C1 | C2 | C5 | 178.3° | 179.9° |
C3 | C1 | C2 | C6 | 2.1° | 0.1° |
C1 | C3 | C8 | C12 | 0.6° | 0.1° |
C3 | C1 | C4 | H9 | 179.0° | 180.0° |
C1 | C3 | N7 | H11 | 179.7° | 180.0° |
C1 | C3 | C8 | H12 | 179.5° | 180.0° |
C1 | C2 | C5 | C10 | 58.1° | 65.0° |
C1 | C2 | C5 | C6 | 179.5° | 180.0° |
C2 | C1 | C3 | C8 | 2.1° | 0.1° |
C1 | C2 | C6 | C12 | 0.7° | 0.1° |
C2 | C1 | C4 | H9 | 1.9° | 0.2° |
C1 | C2 | C6 | H10 | 179.2° | 180.0° |
C20 | C14 | C10 | C5 | 179.7° | 180.0° |
C14 | C20 | C22 | H6 | 180.0° | 179.9° |
C20 | C14 | C10 | C15 | 0.3° | 0.6° |
C14 | C20 | C22 | C21 | 2.5° | 1.1° |
C20 | C14 | C19 | H5 | 0.9° | 0.3° |
C14 | C20 | C22 | H8 | 177.5° | 180.0° |
C14 | C10 | C5 | C15 | 179.4° | 179.4° |
C14 | C10 | C5 | C2 | 179.3° | 179.4° |
C10 | C14 | C20 | C22 | 0.6° | 0.1° |
C14 | C10 | C15 | C21 | 0.7° | 0.0° |
C14 | C10 | C15 | H3 | 179.3° | 180.0° |
C10 | C14 | C19 | H5 | 178.9° | 179.7° |
C10 | C14 | C20 | H6 | 179.4° | 180.0° |
C10 | C5 | C2 | C6 | 122.4° | 115.0° |
C5 | C10 | C15 | C21 | 178.7° | 179.4° |
C10 | C5 | C11 | H1 | 179.2° | 180.0° |
C5 | C10 | C15 | H3 | 1.3° | 0.6° |
C2 | C5 | C10 | C15 | 1.3° | 0.0° |
C5 | C2 | C6 | C12 | 179.7° | 179.9° |
C2 | C5 | C11 | H1 | 0.8° | 0.0° |
C5 | C2 | C6 | H10 | 0.3° | 0.0° |
C20 | C22 | C21 | H8 | 180.0° | 178.9° |
C20 | C22 | C21 | C15 | 3.4° | 1.7° |
C20 | C22 | C21 | H7 | 176.6° | 179.4° |
C3 | C8 | C12 | H12 | 180.0° | 179.9° |
C3 | C8 | C12 | C6 | 0.8° | 0.1° |
C3 | C8 | C12 | H2 | 179.2° | 180.0° |
C8 | C3 | N7 | H11 | 0.2° | 0.2° |
C10 | C15 | C21 | C22 | 2.6° | 1.2° |
C10 | C15 | C21 | H3 | 180.0° | 180.0° |
C10 | C15 | C21 | H7 | 177.5° | 180.0° |
C2 | C6 | C12 | C8 | 0.7° | 0.1° |
C2 | C6 | C12 | H10 | 180.0° | 179.9° |
C2 | C6 | C12 | H2 | 179.3° | 180.0° |
C22 | C21 | C15 | H7 | 180.0° | 178.8° |
C22 | C21 | C15 | H3 | 177.4° | 178.9° |
C21 | C22 | C20 | H6 | 177.6° | 178.9° |
C15 | C21 | C22 | H8 | 176.6° | 179.3° |
C8 | C12 | C6 | H2 | 180.0° | 179.9° |
C8 | C12 | C6 | H10 | 179.3° | 180.0° |
C6 | C12 | C8 | H12 | 179.2° | 180.0° |
H1 | C11 | C16 | H4 | 0.4° | 0.3° |
H2 | C12 | C6 | H10 | 0.7° | 0.1° |
H2 | C12 | C8 | H12 | 0.8° | 0.1° |
H3 | C15 | C21 | H7 | 2.6° | 0.0° |
H4 | C16 | C19 | H5 | 1.4° | 0.1° |
H6 | C20 | C22 | H8 | 2.4° | 0.1° |
H7 | C21 | C22 | H8 | 3.4° | 0.5° |