Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5BE

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C13sing1.53Å1.53Å
C1N14sing1.47Å1.49Å
C2C3sing1.47Å1.40ÅAromatic
C2N17doub1.31Å1.33ÅAromatic
C2N18sing1.37Å1.34ÅAromatic
C3C4doub1.40Å1.37ÅAromatic
C3N7sing1.36Å1.36ÅAromatic
C4C5sing1.41Å1.39ÅAromatic
C4C9sing1.47Å1.54Å
C5N6doub1.31Å1.33ÅAromatic
C5C8sing1.51Å1.53Å
N6N7sing1.40Å1.25ÅAromatic
C9O10doub1.22Å1.24Å
C9N11sing1.35Å1.32Å
N11C12sing1.47Å1.49Å
C12C13sing1.53Å1.55Å
C12C16sing1.53Å1.54Å
N14C15sing1.47Å1.48Å
N14C28sing1.47Å1.51Å
C15C16sing1.53Å1.58Å
N17C20sing1.35Å1.32ÅAromatic
N18C19sing1.38Å1.33ÅAromatic
C19C20doub1.41Å1.39ÅAromatic
C19C24sing1.39Å1.41ÅAromatic
C20C21sing1.40Å1.40ÅAromatic
C21C22doub1.37Å1.38ÅAromatic
C22C23sing1.39Å1.40ÅAromatic
C22C25sing1.51Å1.55Å
C23C24doub1.38Å1.41ÅAromatic
C25C26sing1.53Å1.55Å
C25C27sing1.53Å1.54Å
C1H1sing1.09Å1.10Å
C1H1Asing1.09Å1.10Å
N7HN7sing0.97Å1.00Å
C8H8sing1.09Å1.10Å
C8H8Asing1.09Å1.10Å
C8H8Bsing1.09Å1.10Å
N11HN11sing0.97Å1.00Å
C12H12sing1.09Å1.10Å
C13H13sing1.09Å1.10Å
C13H13Asing1.09Å1.10Å
C15H15sing1.09Å1.10Å
C15H15Asing1.09Å1.10Å
C16H16sing1.09Å1.10Å
C16H16Asing1.09Å1.10Å
N18HN18sing0.97Å1.00Å
C21H21sing1.08Å1.08Å
C23H23sing1.08Å1.08Å
C24H24sing1.08Å1.08Å
C25H25sing1.09Å1.10Å
C26H26sing1.09Å1.10Å
C26H26Asing1.09Å1.10Å
C26H26Bsing1.09Å1.10Å
C27H27sing1.09Å1.10Å
C27H27Asing1.09Å1.10Å
C27H27Bsing1.09Å1.10Å
C28H28sing1.09Å1.10Å
C28H28Asing1.09Å1.10Å
C28H28Bsing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C13C1N14108.2°109.5°
C1C13C12112.8°109.3°
C13C1H1109.9°109.5°
C13C1H1A109.9°109.5°
C1C13H13108.4°109.5°
C1C13H13A108.4°109.5°
C1N14C15111.4°111.2°
C1N14C28111.9°111.0°
N14C1H1109.9°109.4°
N14C1H1A109.9°109.5°
C3C2N17120.1°125.2°
C3C2N18129.5°125.2°
C2C3C4126.8°126.5°
C2C3N7125.3°126.5°
N17C2N18110.3°109.7°
C2N17C20107.4°109.7°
C2N18C19106.8°107.1°
C2N18HN18126.6°126.5°
C4C3N7107.7°107.0°
C3C4C5103.2°107.0°
C3C4C9133.7°126.5°
C3N7N6110.5°108.2°
C3N7HN7124.7°125.9°
C5C4C9122.8°126.5°
C4C5N6109.5°108.5°
C4C5C8127.0°125.8°
C4C9O10118.2°120.0°
C4C9N11119.7°120.0°
N6C5C8123.5°125.7°
C5N6N7108.9°109.2°
C5C8H8109.5°109.5°
C5C8H8A109.4°109.5°
C5C8H8B109.5°109.5°
N6N7HN7124.7°125.8°
O10C9N11121.7°120.0°
C9N11C12121.4°120.0°
C9N11HN11119.3°120.0°
N11C12C13108.9°109.5°
N11C12C16112.1°109.5°
C12N11HN11119.3°120.0°
N11C12H12107.9°109.5°
C13C12C16108.9°109.2°
C13C12H12111.1°109.5°
C12C13H13108.4°109.5°
C12C13H13A108.4°109.5°
C12C16C15109.1°109.3°
C16C12H12107.8°109.6°
C12C16H16109.6°109.5°
C12C16H16A109.6°109.6°
C15N14C28108.4°111.0°
N14C15C16110.5°109.5°
N14C15H15109.1°109.4°
N14C15H15A109.1°109.4°
N14C28H28109.5°109.5°
N14C28H28A109.5°109.5°
N14C28H28B109.5°109.4°
C16C15H15109.1°109.5°
C16C15H15A109.1°109.5°
C15C16H16109.6°109.5°
C15C16H16A109.6°109.5°
N17C20C19108.2°107.3°
N17C20C21130.8°133.3°
N18C19C20107.2°106.2°
N18C19C24133.4°134.0°
C19N18HN18126.6°126.4°
C20C19C24119.4°119.8°
C19C20C21120.9°119.3°
C19C24C23119.2°119.7°
C19C24H24120.4°120.1°
C20C21C22120.4°119.9°
C20C21H21119.8°120.0°
C21C22C23119.3°120.7°
C21C22C25116.5°119.6°
C22C21H21119.8°120.1°
C23C22C25124.2°119.7°
C22C23C24120.8°120.5°
C22C23H23119.6°119.8°
C22C25C26108.4°109.4°
C22C25C27114.7°109.5°
C22C25H25107.8°109.5°
C24C23H23119.6°119.7°
C23C24H24120.4°120.1°
C26C25C27113.0°109.5°
C26C25H25109.9°109.5°
C25C26H26109.5°109.5°
C25C26H26A109.5°109.5°
C25C26H26B109.5°109.5°
C27C25H25102.7°109.5°
C25C27H27109.5°109.5°
C25C27H27A109.5°109.5°
C25C27H27B109.5°109.5°
H1C1H1A109.0°109.5°
H8C8H8A109.5°109.4°
H8C8H8B109.5°109.5°
H8AC8H8B109.5°109.5°
H13C13H13A110.5°109.6°
H15C15H15A109.8°109.5°
H16C16H16A109.3°109.5°
H26C26H26A109.4°109.5°
H26C26H26B109.5°109.4°
H26AC26H26B109.5°109.4°
H27C27H27A109.5°109.4°
H27C27H27B109.4°109.4°
H27AC27H27B109.5°109.5°
H28C28H28A109.5°109.5°
H28C28H28B109.5°109.5°
H28AC28H28B109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C13C1N14H1120.0°120.0°
C13C1N14H1A120.0°120.0°
C1C13C12N11178.8°177.6°
C1C13C12H13120.0°119.9°
C1C13C12H13A120.0°120.0°
C1C13C12C1656.2°57.7°
C13C1N14C1561.1°61.8°
C13C1N14C28177.3°174.2°
C13C1H1H1A120.5°120.0°
C1C13C12H1262.5°62.3°
C1C13H13H13A118.6°120.2°
N14C1C13C1258.4°59.2°
C1N14C15C28123.5°124.1°
C1N14C15C1662.1°61.7°
N14C1H1H1A120.5°120.0°
N14C1C13H13178.4°179.1°
N14C1C13H13A61.6°60.7°
C1N14C15H15177.9°178.3°
C1N14C15H15A57.9°58.3°
C1N14C28H28180.0°60.0°
C1N14C28H28A60.0°179.9°
C1N14C28H28B60.0°60.0°
C3C2N17N18178.8°179.8°
C2C3C4N7175.6°179.7°
C2C3C4C5178.8°180.0°
C2C3C4C97.2°0.0°
C2C3N7N6179.1°179.8°
C3C2N17C20177.3°180.0°
C3C2N18C19177.3°180.0°
C2C3N7HN70.9°0.0°
C3C2N18HN182.7°0.1°
N17C2C3C4173.7°0.0°
N17C2C3N71.2°179.7°
N17C2N18C191.3°0.2°
C2N17C20C191.1°0.1°
C2N17C20C21176.2°180.0°
N17C2N18HN18178.6°179.8°
N18C2C3C44.8°179.7°
N18C2C3N7179.7°0.6°
N18C2N17C201.5°0.2°
C2N18C19HN18180.0°180.0°
C2N18C19C200.6°0.1°
C2N18C19C24179.7°180.0°
C3C4C5C9174.8°180.0°
C3C4C5N62.2°0.0°
C3C4C5C8179.0°179.9°
C4C3N7N63.5°0.4°
C3C4C9O10176.3°90.0°
C3C4C9N113.8°90.0°
C4C3N7HN7176.5°179.7°
N7C3C4C53.3°0.3°
N7C3C4C9177.3°179.8°
C3N7N6C52.0°0.5°
C3N7N6HN7180.0°179.9°
C4C5N6C8178.8°179.9°
C4C5N6N70.2°0.3°
C5C4C9O103.2°90.1°
C5C4C9N11169.3°90.0°
C4C5C8H8178.6°90.1°
C4C5C8H8A58.6°150.0°
C4C5C8H8B61.4°29.9°
C9C4C5N6177.0°180.0°
C9C4C5C84.2°0.0°
C4C9O10N11172.3°179.9°
C4C9N11C12174.2°180.0°
C4C9N11HN115.8°0.0°
C5N6N7HN7178.0°179.7°
N6C5C8H80.0°90.0°
N6C5C8H8A120.0°29.9°
N6C5C8H8B120.0°150.0°
C8C5N6N7179.0°179.8°
C5C8H8H8A120.0°120.0°
C5C8H8H8B120.0°120.0°
C5C8H8AH8B120.0°120.0°
O10C9N11C122.0°0.0°
O10C9N11HN11178.0°180.0°
C9N11C12HN11180.0°180.0°
C9N11C12C1382.5°155.0°
C9N11C12C16156.9°85.3°
C9N11C12H1238.2°34.9°
N11C12C13C16122.6°119.8°
N11C12C13H12118.7°120.1°
N11C12C16H12118.7°120.2°
N11C12C16C15174.3°177.6°
N11C12C13H1361.2°62.6°
N11C12C13H13A58.8°57.6°
N11C12C16H1665.7°62.5°
N11C12C16H16A54.3°57.6°
C13C12C16H12120.7°120.0°
C13C12C16C1553.7°57.7°
C12C13C1H1178.4°179.2°
C12C13C1H1A61.6°60.8°
C13C12N11HN1197.5°25.0°
C12C13H13H13A118.6°120.1°
C13C12C16H16173.7°177.6°
C13C12C16H16A66.4°62.3°
C12C16C15N1457.9°59.2°
C12C16C15H16120.0°119.9°
C12C16C15H16A120.0°120.0°
C16C12N11HN1123.2°94.7°
C16C12C13H13176.2°177.6°
C16C12C13H13A63.8°62.3°
C12C16C15H15177.9°179.2°
C12C16C15H15A62.1°60.8°
C12C16H16H16A120.1°120.1°
N14C15C16H15120.0°120.0°
N14C15C16H15A120.0°120.0°
C15N14C1H1178.9°178.2°
C15N14C1H1A58.9°58.3°
N14C15H15H15A119.6°119.9°
N14C15C16H16177.9°179.1°
N14C15C16H16A62.1°60.8°
C15N14C28H2856.7°64.3°
C15N14C28H28A176.7°55.9°
C15N14C28H28B63.3°175.8°
C28N14C15C16174.4°174.2°
C28N14C1H157.3°54.2°
C28N14C1H1A62.6°65.8°
C28N14C15H1554.4°54.2°
C28N14C15H15A65.7°65.8°
N14C28H28H28A120.0°120.1°
N14C28H28H28B120.0°120.0°
N14C28H28AH28B120.0°119.9°
C15C16C12H1267.0°62.3°
C16C15H15H15A119.6°120.0°
C15C16H16H16A120.1°120.1°
N17C20C19N180.3°0.0°
N17C20C19C21177.6°179.8°
N17C20C19C24179.5°179.9°
N17C20C21C22179.2°180.0°
N17C20C21H210.8°0.1°
N18C19C20C24179.8°179.9°
N18C19C20C21177.4°179.9°
N18C19C24C23178.4°179.9°
N18C19C24H241.6°0.1°
C19C20C21C222.2°0.2°
C20C19C24C231.9°0.3°
C20C19N18HN18179.4°179.9°
C19C20C21H21177.8°179.9°
C20C19C24H24178.1°179.8°
C24C19C20C212.9°0.0°
C19C24C23C220.2°0.5°
C19C24C23H24180.0°179.9°
C24C19N18HN180.4°0.0°
C19C24C23H23179.7°179.8°
C20C21C22H21180.0°180.0°
C20C21C22C230.5°0.0°
C20C21C22C25178.2°180.0°
C21C22C23C25178.6°180.0°
C21C22C23C240.5°0.3°
C21C22C25C26103.0°120.0°
C21C22C25C27129.7°120.0°
C21C22C23H23179.5°180.0°
C21C22C25H2515.9°0.0°
C22C23C24H23180.0°179.7°
C23C22C25C2678.4°60.0°
C23C22C25C2748.9°60.0°
C23C22C21H21179.5°180.0°
C22C23C24H24179.8°179.6°
C23C22C25H25162.7°180.0°
C25C22C23C24179.1°179.7°
C22C25C26C27128.3°120.0°
C22C25C26H25117.6°120.0°
C22C25C27H25116.7°120.1°
C25C22C21H211.8°0.0°
C25C22C23H231.0°0.0°
C22C25C26H26180.0°60.1°
C22C25C26H26A60.0°60.0°
C22C25C26H26B60.0°180.0°
C22C25C27H27180.0°60.0°
C22C25C27H27A60.0°180.0°
C22C25C27H27B60.0°59.9°
C26C25C27H25118.3°120.0°
C25C26H26H26A120.0°120.1°
C25C26H26H26B120.0°120.0°
C25C26H26AH26B120.0°120.0°
C26C25C27H2755.0°180.0°
C26C25C27H27A175.1°60.1°
C26C25C27H27B65.0°60.0°
C27C25C26H2651.6°180.0°
C27C25C26H26A68.3°60.0°
C27C25C26H26B171.7°60.0°
C25C27H27H27A120.0°120.0°
C25C27H27H27B120.0°120.0°
C25C27H27AH27B120.0°120.1°
H1C1C13H1361.6°60.9°
H1C1C13H13A58.4°59.2°
H1AC1C13H1358.4°59.0°
H1AC1C13H13A178.4°179.2°
H8C8H8AH8B120.0°120.0°
HN11N11C12H12141.8°145.1°
H12C12C13H1357.5°57.6°
H12C12C13H13A177.5°177.7°
H12C12C16H1653.0°57.6°
H12C12C16H16A173.0°177.8°
H15C15C16H1662.1°60.9°
H15C15C16H16A57.9°59.2°
H15AC15C16H1657.9°59.1°
H15AC15C16H16A177.9°179.2°
H23C23C24H240.2°0.1°
H25C25C26H2662.4°60.0°
H25C25C26H26A177.6°180.0°
H25C25C26H26B57.6°60.0°
H25C25C27H2763.3°60.0°
H25C25C27H27A56.8°59.9°
H25C25C27H27B176.8°180.0°
H26C26H26AH26B120.0°119.9°
H27C27H27AH27B120.0°119.9°
H28C28H28AH28B120.0°120.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon