5AS

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
S	N1S	sing	1.66Å	1.65Å
S	O2S	doub	1.42Å	1.48Å
S	O3S	doub	1.42Å	1.46Å
S	O5'	sing	1.52Å	1.60Å
N1S	C10	sing	1.46Å	1.46Å
N1S	H1S	sing	0.97Å	1.02Å
O5'	C5'	sing	1.43Å	1.51Å
C5'	C4'	sing	1.53Å	1.51Å
C5'	H5'1	sing	1.09Å	1.11Å
C5'	H5'2	sing	1.09Å	1.12Å
C4'	O4'	sing	1.44Å	1.42Å
C4'	C3'	sing	1.54Å	1.55Å
C4'	H4'	sing	1.09Å	1.11Å
O4'	C1'	sing	1.44Å	1.40Å
C3'	O3'	sing	1.43Å	1.42Å
C3'	C2'	sing	1.55Å	1.51Å
C3'	H3'	sing	1.09Å	1.12Å
O3'	HO'3	sing	0.97Å	0.95Å
C2'	O2'	sing	1.43Å	1.43Å
C2'	C1'	sing	1.55Å	1.53Å
C2'	H2'	sing	1.09Å	1.12Å
O2'	HO'2	sing	0.97Å	0.95Å
C1'	N9	sing	1.46Å	1.45Å
C1'	H1'	sing	1.09Å	1.11Å
N9	C8	sing	1.36Å	1.37Å	Aromatic
N9	C4	sing	1.37Å	1.36Å	Aromatic
C8	N7	doub	1.30Å	1.30Å	Aromatic
C8	H8	sing	1.08Å	1.10Å
N7	C5	sing	1.35Å	1.39Å	Aromatic
C5	C6	doub	1.41Å	1.42Å	Aromatic
C5	C4	sing	1.40Å	1.43Å	Aromatic
C6	N6	sing	1.38Å	1.35Å
C6	N1	sing	1.33Å	1.37Å	Aromatic
N6	H61	sing	0.97Å	1.02Å
N6	H62	sing	0.97Å	1.02Å
N1	C2	doub	1.32Å	1.34Å	Aromatic
C2	N3	sing	1.32Å	1.35Å	Aromatic
C2	H2	sing	1.08Å	1.10Å
N3	C4	doub	1.33Å	1.39Å	Aromatic
C10	C11	sing	1.53Å	1.50Å
C10	H101	sing	1.09Å	1.12Å
C10	H102	sing	1.09Å	1.12Å
C11	H111	sing	1.09Å	1.12Å
C11	H112	sing	1.09Å	1.11Å
C11	H113	sing	1.09Å	1.11Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
N1S	S	O2S	107.9°	105.8°
N1S	S	O3S	108.3°	105.7°
N1S	S	O5'	112.9°	107.4°
S	N1S	C10	125.1°	120.0°
S	N1S	H1S	106.7°	120.0°
O2S	S	O3S	113.4°	125.4°
O2S	S	O5'	109.7°	105.8°
O3S	S	O5'	104.6°	105.8°
S	O5'	C5'	120.7°	106.8°
C10	N1S	H1S	106.7°	120.0°
N1S	C10	C11	107.4°	109.5°
N1S	C10	H101	113.0°	109.4°
N1S	C10	H102	113.0°	109.5°
O5'	C5'	C4'	110.8°	109.5°
O5'	C5'	H5'1	111.7°	109.4°
O5'	C5'	H5'2	111.7°	109.5°
C4'	C5'	H5'1	111.8°	109.4°
C4'	C5'	H5'2	111.7°	109.5°
C5'	C4'	O4'	106.9°	109.9°
C5'	C4'	C3'	112.8°	110.0°
C5'	C4'	H4'	108.9°	109.8°
H5'1	C5'	H5'2	98.6°	109.4°
O4'	C4'	C3'	109.0°	107.4°
O4'	C4'	H4'	112.6°	109.9°
C4'	O4'	C1'	106.7°	107.0°
C3'	C4'	H4'	106.7°	109.9°
C4'	C3'	O3'	113.3°	110.8°
C4'	C3'	C2'	107.8°	104.1°
C4'	C3'	H3'	108.1°	110.4°
O4'	C1'	C2'	115.7°	103.5°
O4'	C1'	N9	119.8°	110.6°
O4'	C1'	H1'	136.4°	110.6°
O3'	C3'	C2'	109.9°	110.6°
O3'	C3'	H3'	106.0°	110.4°
C3'	O3'	HO'3	113.3°	106.8°
C2'	C3'	H3'	111.7°	110.5°
C3'	C2'	O2'	110.4°	110.8°
C3'	C2'	C1'	100.5°	102.1°
C3'	C2'	H2'	116.7°	111.0°
O2'	C2'	C1'	115.2°	110.9°
O2'	C2'	H2'	102.5°	110.8°
C2'	O2'	HO'2	110.4°	106.8°
C1'	C2'	H2'	112.1°	110.9°
C2'	C1'	N9	124.4°	110.7°
C2'	C1'	H1'	90.6°	110.6°
N9	C1'	H1'	50.3°	110.5°
C1'	N9	C8	126.8°	126.2°
C1'	N9	C4	125.5°	126.3°
C8	N9	C4	107.7°	107.4°
N9	C8	N7	112.6°	110.0°
N9	C8	H8	126.1°	125.0°
N9	C4	C5	105.2°	106.0°
N9	C4	N3	129.8°	135.0°
N7	C8	H8	121.3°	125.0°
C8	N7	C5	106.5°	109.5°
N7	C5	C6	134.6°	134.6°
N7	C5	C4	108.0°	107.1°
C6	C5	C4	117.4°	118.2°
C5	C6	N6	122.4°	120.8°
C5	C6	N1	116.8°	118.4°
C5	C4	N3	125.0°	119.0°
N6	C6	N1	120.9°	120.8°
C6	N6	H61	122.4°	120.0°
C6	N6	H62	107.6°	120.0°
C6	N1	C2	121.0°	121.2°
H61	N6	H62	107.6°	120.0°
N1	C2	N3	128.3°	122.4°
N1	C2	H2	115.2°	118.7°
N3	C2	H2	116.4°	118.8°
C2	N3	C4	111.4°	120.7°
C11	C10	H101	113.0°	109.5°
C11	C10	H102	113.0°	109.4°
C10	C11	H111	107.4°	109.5°
C10	C11	H112	112.9°	109.4°
C10	C11	H113	112.9°	109.5°
H101	C10	H102	97.5°	109.5°
H111	C11	H112	112.9°	109.5°
H111	C11	H113	113.0°	109.5°
H112	C11	H113	97.6°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
N1S	S	O2S	O3S	120.0°	123.1°
N1S	S	O2S	O5'	123.4°	113.7°
N1S	S	O3S	O5'	120.7°	113.7°
S	N1S	C10	H1S	125.3°	179.9°
N1S	S	O5'	C5'	83.5°	90.1°
S	N1S	C10	C11	46.8°	180.0°
S	N1S	C10	H101	78.5°	60.0°
S	N1S	C10	H102	172.1°	60.0°
O2S	S	O3S	O5'	119.6°	123.2°
O2S	S	N1S	C10	150.2°	172.6°
O2S	S	N1S	H1S	84.5°	7.3°
O2S	S	O5'	C5'	36.9°	22.6°
O3S	S	N1S	C10	86.6°	52.6°
O3S	S	N1S	H1S	38.7°	127.4°
O3S	S	O5'	C5'	158.9°	157.4°
O5'	S	N1S	C10	28.7°	60.0°
O5'	S	N1S	H1S	154.0°	120.0°
S	O5'	C5'	C4'	153.1°	180.0°
S	O5'	C5'	H5'1	81.6°	60.0°
S	O5'	C5'	H5'2	27.9°	59.9°
N1S	C10	C11	H101	125.3°	120.0°
N1S	C10	C11	H102	125.3°	120.0°
N1S	C10	H101	H102	118.9°	120.0°
N1S	C10	C11	H111	180.0°	180.0°
N1S	C10	C11	H112	54.8°	60.0°
N1S	C10	C11	H113	54.8°	60.0°
H1S	N1S	C10	C11	78.5°	0.0°
H1S	N1S	C10	H101	156.2°	120.1°
H1S	N1S	C10	H102	46.8°	119.9°
O5'	C5'	C4'	H5'1	125.3°	120.0°
O5'	C5'	C4'	H5'2	125.3°	120.1°
O5'	C5'	H5'1	H5'2	117.6°	120.0°
O5'	C5'	C4'	O4'	159.5°	61.6°
O5'	C5'	C4'	C3'	80.7°	179.7°
O5'	C5'	C4'	H4'	37.6°	59.3°
C4'	C5'	H5'1	H5'2	117.6°	119.9°
C5'	C4'	O4'	C3'	122.2°	119.6°
C5'	C4'	O4'	H4'	119.6°	120.9°
C5'	C4'	C3'	H4'	119.5°	121.0°
C5'	C4'	O4'	C1'	121.5°	146.0°
C5'	C4'	C3'	O3'	122.6°	119.8°
C5'	C4'	C3'	C2'	115.6°	121.4°
C5'	C4'	C3'	H3'	5.3°	2.9°
H5'1	C5'	C4'	O4'	34.2°	58.3°
H5'1	C5'	C4'	C3'	154.0°	59.7°
H5'1	C5'	C4'	H4'	87.7°	179.3°
H5'2	C5'	C4'	O4'	75.2°	178.2°
H5'2	C5'	C4'	C3'	44.6°	60.2°
H5'2	C5'	C4'	H4'	162.8°	60.8°
O4'	C4'	C3'	H4'	121.9°	119.5°
O4'	C4'	C3'	O3'	118.9°	120.7°
O4'	C4'	C3'	C2'	3.0°	1.8°
O4'	C4'	C3'	H3'	123.9°	116.7°
C4'	O4'	C1'	C2'	2.0°	40.1°
C4'	O4'	C1'	N9	178.3°	158.7°
C4'	O4'	C1'	H1'	119.5°	78.5°
C3'	C4'	O4'	C1'	0.7°	26.4°
C4'	C3'	O3'	C2'	120.7°	114.8°
C4'	C3'	O3'	H3'	118.5°	122.6°
C4'	C3'	C2'	H3'	118.7°	118.5°
C4'	C3'	O3'	HO'3	180.0°	176.3°
C4'	C3'	C2'	O2'	125.8°	139.2°
C4'	C3'	C2'	C1'	3.8°	21.0°
C4'	C3'	C2'	H2'	117.7°	97.2°
H4'	C4'	O4'	C1'	118.9°	93.1°
H4'	C4'	C3'	O3'	3.0°	1.2°
H4'	C4'	C3'	C2'	124.9°	117.6°
H4'	C4'	C3'	H3'	114.2°	123.9°
O4'	C1'	C2'	C3'	3.7°	37.1°
O4'	C1'	C2'	O2'	122.3°	155.2°
O4'	C1'	C2'	N9	176.1°	118.6°
O4'	C1'	C2'	H1'	144.0°	118.5°
O4'	C1'	C2'	H2'	121.0°	81.2°
O4'	C1'	N9	H1'	127.5°	122.9°
O4'	C1'	N9	C8	96.1°	28.5°
O4'	C1'	N9	C4	80.5°	151.8°
O3'	C3'	C2'	H3'	117.3°	122.5°
O3'	C3'	C2'	O2'	1.8°	20.2°
O3'	C3'	C2'	C1'	120.2°	98.0°
O3'	C3'	C2'	H2'	118.3°	143.8°
C2'	C3'	O3'	HO'3	59.3°	61.4°
C3'	C2'	O2'	C1'	113.0°	112.6°
C3'	C2'	O2'	H2'	125.0°	123.7°
C3'	C2'	C1'	H2'	124.7°	118.3°
C3'	C2'	O2'	HO'2	180.0°	67.4°
C3'	C2'	C1'	N9	179.8°	155.7°
C3'	C2'	C1'	H1'	140.2°	81.4°
H3'	C3'	O3'	HO'3	61.5°	61.1°
H3'	C3'	C2'	O2'	115.5°	102.3°
H3'	C3'	C2'	C1'	122.4°	139.5°
H3'	C3'	C2'	H2'	1.0°	21.3°
O2'	C2'	C1'	H2'	116.7°	123.6°
O2'	C2'	C1'	N9	61.6°	86.2°
O2'	C2'	C1'	H1'	21.6°	36.7°
C1'	C2'	O2'	HO'2	67.1°	180.0°
C2'	C1'	N9	H1'	56.6°	123.0°
C2'	C1'	N9	C8	79.8°	85.6°
C2'	C1'	N9	C4	103.6°	94.1°
H2'	C2'	O2'	HO'2	54.9°	56.3°
H2'	C2'	C1'	N9	55.1°	37.4°
H2'	C2'	C1'	H1'	95.0°	160.3°
C1'	N9	C8	C4	177.1°	179.7°
C1'	N9	C8	N7	176.7°	180.0°
C1'	N9	C8	H8	3.4°	0.0°
C1'	N9	C4	C5	176.6°	179.9°
C1'	N9	C4	N3	3.0°	0.8°
H1'	C1'	N9	C8	136.4°	151.4°
H1'	C1'	N9	C4	47.0°	28.9°
N9	C8	N7	H8	180.0°	180.0°
N9	C8	N7	C5	0.1°	0.0°
C8	N9	C4	C5	0.5°	0.4°
C8	N9	C4	N3	179.9°	179.5°
C4	N9	C8	N7	0.4°	0.3°
C4	N9	C8	H8	179.6°	179.7°
N9	C4	C5	N7	0.5°	0.4°
N9	C4	C5	C6	179.8°	179.8°
N9	C4	C5	N3	179.6°	179.2°
N9	C4	N3	C2	179.7°	179.5°
C8	N7	C5	C6	179.9°	180.0°
C8	N7	C5	C4	0.3°	0.2°
H8	C8	N7	C5	179.9°	180.0°
N7	C5	C6	C4	179.6°	179.7°
N7	C5	C6	N6	0.5°	0.0°
N7	C5	C6	N1	179.8°	180.0°
N7	C5	C4	N3	179.9°	179.6°
C5	C6	N6	N1	179.7°	179.9°
C5	C6	N6	H61	180.0°	180.0°
C5	C6	N6	H62	54.8°	0.1°
C5	C6	N1	C2	0.2°	0.0°
C6	C5	C4	N3	0.2°	0.6°
C4	C5	C6	N6	179.9°	179.7°
C4	C5	C6	N1	0.2°	0.3°
C5	C4	N3	C2	0.2°	0.6°
C6	N6	H61	H62	125.3°	179.9°
N6	C6	N1	C2	179.9°	180.0°
N1	C6	N6	H61	0.4°	0.0°
N1	C6	N6	H62	125.6°	180.0°
C6	N1	C2	N3	0.3°	0.0°
C6	N1	C2	H2	179.7°	180.0°
N1	C2	N3	H2	180.0°	180.0°
N1	C2	N3	C4	0.3°	0.2°
H2	C2	N3	C4	179.7°	179.7°
C11	C10	H101	H102	118.9°	120.0°
C10	C11	H111	H112	125.2°	120.0°
C10	C11	H111	H113	125.2°	120.0°
C10	C11	H112	H113	118.9°	120.0°
H101	C10	C11	H111	54.7°	60.0°
H101	C10	C11	H112	179.9°	60.0°
H101	C10	C11	H113	70.5°	180.0°
H102	C10	C11	H111	54.7°	60.0°
H102	C10	C11	H112	70.5°	180.0°
H102	C10	C11	H113	179.9°	60.0°
H111	C11	H112	H113	118.9°	120.0°

Definition date:	2004-01-16
Last modified:	2011-06-04
Release status:	REL
Processing site:	RCSB
Derived from:	1RZY