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5AM

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C8sing1.51Å1.49Å
C1O2sing1.45Å1.44Å
C1H11Asing1.09Å1.10Å
C1H12Asing1.09Å1.10Å
C3O2sing1.35Å1.34Å
C3N4sing1.35Å1.44Å
C3O14doub1.21Å1.23Å
C7N23sing1.34Å1.39ÅAromatic
C7N20doub1.30Å1.35ÅAromatic
C7C6sing1.51Å1.47Å
C8C9sing1.38Å1.47ÅAromatic
C8C13doub1.38Å1.46ÅAromatic
C9C10doub1.38Å1.45ÅAromatic
C9H9sing1.08Å1.08Å
C10C11sing1.38Å1.46ÅAromatic
C10H10sing1.08Å1.08Å
C11C12doub1.38Å1.44ÅAromatic
C11H11sing1.08Å1.08Å
C12C13sing1.38Å1.45ÅAromatic
C12H12sing1.08Å1.08Å
C13H13sing1.08Å1.08Å
C15C16sing1.53Å1.56Å
C15C5sing1.53Å1.56Å
C15H151sing1.09Å1.10Å
C15H152sing1.09Å1.10Å
C16C17sing1.53Å1.54Å
C16H161sing1.09Å1.10Å
C16H162sing1.09Å1.10Å
C22N23doub1.31Å1.38ÅAromatic
C22O21sing1.34Å1.34ÅAromatic
C22C25sing1.51Å1.47Å
N26C27sing1.47Å1.53Å
N26C31sing1.47Å1.53Å
N26C25sing1.47Å1.49Å
C27C28sing1.53Å1.57Å
C27H271sing1.09Å1.10Å
C27H272sing1.09Å1.10Å
N29C30sing1.47Å1.52Å
N29C32sing1.35Å1.46Å
N29C28sing1.47Å1.52Å
C30C31sing1.53Å1.57Å
C30H301sing1.09Å1.10Å
C30H302sing1.09Å1.10Å
C31H311sing1.09Å1.10Å
C31H312sing1.09Å1.10Å
C32C33sing1.51Å1.47Å
C32O34doub1.21Å1.25Å
C33C35sing1.53Å1.54Å
C33H331sing1.09Å1.10Å
C33H332sing1.09Å1.10Å
C35C36sing1.53Å1.53Å
C35H351sing1.09Å1.10Å
C35H352sing1.09Å1.10Å
N4C5sing1.47Å1.46Å
N4HN4sing0.97Å1.00Å
C5C6sing1.53Å1.58Å
C5H5sing1.09Å1.10Å
C17C18sing1.53Å1.54Å
C17H171sing1.09Å1.10Å
C17H172sing1.09Å1.10Å
C18N19sing1.47Å1.46Å
C18H181sing1.09Å1.10Å
C18H182sing1.09Å1.10Å
N19H191sing1.01Å1.00Å
N19H192sing1.01Å1.00Å
N20O21sing1.21Å1.31ÅAromatic
O24C6sing1.43Å1.45Å
O24HO24sing0.97Å0.95Å
C25H251sing1.09Å1.10Å
C25H252sing1.09Å1.10Å
C28H281sing1.09Å1.10Å
C28H282sing1.09Å1.10Å
C36C37sing1.51Å1.48Å
C36H361sing1.09Å1.10Å
C36H362sing1.09Å1.10Å
C37C38sing1.38Å1.44ÅAromatic
C37C39doub1.38Å1.44ÅAromatic
C38C40doub1.38Å1.42ÅAromatic
C38H38sing1.08Å1.08Å
C39C41sing1.38Å1.43ÅAromatic
C39H39sing1.08Å1.08Å
C40C42sing1.38Å1.43ÅAromatic
C40H40sing1.08Å1.08Å
C41C42doub1.38Å1.43ÅAromatic
C41H41sing1.08Å1.08Å
C42H42sing1.08Å1.08Å
C6H6sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C8C1O2110.8°109.5°
C8C1H11A108.7°109.4°
C8C1H12A109.0°109.5°
C1C8C9120.5°120.0°
C1C8C13120.9°120.0°
O2C1H11A108.7°109.4°
O2C1H12A109.0°109.5°
C1O2C3132.6°120.0°
H11AC1H12A110.5°109.5°
O2C3N4114.9°120.0°
O2C3O14125.5°120.0°
N4C3O14119.5°120.0°
C3N4C5124.8°120.0°
C3N4HN4117.6°120.0°
N23C7N20107.9°107.5°
N23C7C6125.3°126.2°
C7N23C22103.9°105.6°
N20C7C6126.7°126.3°
C7N20O21110.5°110.2°
C7C6C5114.3°109.5°
C7C6O24108.2°109.4°
C7C6H6107.9°109.5°
C9C8C13118.7°120.0°
C8C9C10120.4°120.0°
C8C9H9119.8°120.0°
C8C13C12120.6°120.0°
C8C13H13119.7°120.0°
C10C9H9119.8°120.0°
C9C10C11119.9°120.0°
C9C10H10120.1°120.0°
C11C10H10120.1°120.0°
C10C11C12120.3°120.0°
C10C11H11119.8°120.0°
C12C11H11119.9°120.0°
C11C12C13120.2°120.0°
C11C12H12119.9°120.0°
C13C12H12119.9°120.0°
C12C13H13119.7°120.0°
C16C15C5112.4°109.5°
C16C15H151107.9°109.4°
C16C15H152108.5°109.4°
C15C16C17114.4°109.5°
C15C16H161106.7°109.4°
C15C16H162107.8°109.4°
C5C15H151107.8°109.5°
C5C15H152108.5°109.5°
C15C5N4107.2°109.4°
C15C5C6112.9°109.5°
C15C5H5109.5°109.5°
H151C15H152111.8°109.5°
C17C16H161106.7°109.5°
C17C16H162107.9°109.5°
C16C17C18111.8°109.5°
C16C17H171108.2°109.5°
C16C17H172108.7°109.4°
H161C16H162113.5°109.5°
N23C22O21110.1°106.9°
N23C22C25124.0°126.6°
O21C22C25125.8°126.5°
C22O21N20107.6°109.8°
C22C25N26118.3°109.4°
C22C25H251104.6°109.5°
C22C25H252106.6°109.5°
C27N26C31110.2°107.4°
C27N26C25107.5°106.7°
N26C27C28108.9°109.6°
N26C27H271109.8°109.4°
N26C27H272109.6°109.4°
C31N26C25113.8°106.7°
N26C31C30109.3°109.6°
N26C31H311109.6°109.5°
N26C31H312109.6°109.5°
N26C25H251104.6°109.4°
N26C25H252106.7°109.5°
C28C27H271109.8°109.5°
C28C27H272109.7°109.5°
C27C28N29108.1°108.4°
C27C28H281110.2°109.7°
C27C28H282110.0°109.7°
H271C27H272109.0°109.5°
C30N29C32122.9°121.1°
C30N29C28115.2°117.9°
N29C30C31109.0°108.4°
N29C30H301109.7°109.7°
N29C30H302109.6°109.7°
C32N29C28121.8°121.1°
N29C32C33126.8°120.0°
N29C32O34120.8°120.0°
N29C28H281110.2°109.7°
N29C28H282109.9°109.6°
C31C30H301109.7°109.7°
C31C30H302109.6°109.7°
C30C31H311109.6°109.4°
C30C31H312109.5°109.4°
H301C30H302109.2°109.7°
H311C31H312109.3°109.5°
C33C32O34112.3°120.0°
C32C33C35111.2°109.5°
C32C33H331108.5°109.5°
C32C33H332108.9°109.5°
C35C33H331108.5°109.4°
C35C33H332108.9°109.5°
C33C35C36110.8°109.5°
C33C35H351108.7°109.4°
C33C35H352109.0°109.5°
H331C33H332110.8°109.5°
C36C35H351108.7°109.5°
C36C35H352109.1°109.5°
C35C36C37114.1°109.5°
C35C36H361106.9°109.4°
C35C36H362108.0°109.5°
H351C35H352110.5°109.4°
C5N4HN4117.6°120.0°
N4C5C6111.8°109.5°
N4C5H5110.7°109.5°
C6C5H5104.7°109.5°
C5C6O24111.8°109.4°
C5C6H6103.9°109.5°
C18C17H171108.2°109.5°
C18C17H172108.7°109.5°
C17C18N19109.7°109.5°
C17C18H181109.4°109.5°
C17C18H182109.4°109.5°
H171C17H172111.3°109.5°
N19C18H181109.3°109.5°
N19C18H182109.4°109.5°
C18N19H191109.5°106.7°
C18N19H192109.5°106.7°
H181C18H182109.7°109.4°
H191N19H192109.4°106.8°
C6O24HO24109.5°106.8°
O24C6H6110.6°109.5°
H251C25H252116.7°109.5°
H281C28H282108.4°109.7°
C37C36H361106.9°109.5°
C37C36H362108.0°109.5°
C36C37C38120.7°120.0°
C36C37C39120.2°120.0°
H361C36H362113.1°109.5°
C38C37C39119.0°120.0°
C37C38C40120.6°120.0°
C37C38H38119.7°120.0°
C37C39C41120.4°120.0°
C37C39H39119.8°120.0°
C40C38H38119.7°119.9°
C38C40C42119.9°120.0°
C38C40H40120.1°120.0°
C41C39H39119.8°120.0°
C39C41C42119.8°120.0°
C39C41H41120.1°120.0°
C42C40H40120.0°120.0°
C40C42C41120.3°120.0°
C40C42H42119.9°120.0°
C42C41H41120.1°120.0°
C41C42H42119.8°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C8C1O2H11A119.4°119.9°
C8C1O2H12A120.0°120.0°
C8C1H11AH12A119.6°120.0°
C8C1O2C369.7°180.0°
C1C8C9C13179.9°179.7°
C1C8C9C10179.9°179.8°
C1C8C9H90.1°0.3°
C1C8C13C12180.0°180.0°
C1C8C13H130.1°0.0°
O2C1H11AH12A119.6°120.0°
C1O2C3N4169.6°180.0°
C1O2C3O1410.6°0.1°
O2C1C8C982.2°90.3°
O2C1C8C1397.9°90.0°
H11AC1O2C3170.9°60.1°
H11AC1C8C937.2°149.7°
H11AC1C8C13142.7°29.9°
H12AC1O2C350.3°60.0°
H12AC1C8C9157.8°29.7°
H12AC1C8C1322.2°150.0°
O2C3N4O14179.8°179.9°
O2C3N4C5179.6°180.0°
O2C3N4HN40.4°0.1°
C3N4C5C15139.1°85.1°
C3N4C5HN4180.0°179.9°
C3N4C5C696.7°154.9°
C3N4C5H519.7°34.9°
O14C3N4C50.6°0.0°
O14C3N4HN4179.4°180.0°
N23C7N20C6179.4°179.7°
C7N23C22O210.2°0.3°
C7N23C22C25178.9°179.9°
N23C7C6C571.7°105.3°
N23C7N20O210.2°0.2°
N23C7C6O24163.0°134.7°
N23C7C6H643.3°14.7°
N20C7N23C220.3°0.4°
C7N20O21C220.0°0.0°
N20C7C6C5107.6°75.0°
N20C7C6O2417.6°44.9°
N20C7C6H6137.3°165.0°
C7C6C5C15175.8°65.0°
C6C7N23C22179.2°179.9°
C7C6C5N454.9°175.1°
C7C6C5O24123.3°119.9°
C7C6C5H6117.4°120.0°
C7C6C5H565.1°55.0°
C6C7N20O21179.2°180.0°
C7C6O24H6118.0°120.0°
C7C6O24HO2445.9°60.0°
C8C9C10H9180.0°179.5°
C8C9C10C110.0°0.5°
C8C9C10H10180.0°179.7°
C9C8C13C120.0°0.3°
C9C8C13H13180.0°179.7°
C13C8C9C100.0°0.5°
C13C8C9H9180.0°180.0°
C8C13C12C110.1°0.0°
C8C13C12H13180.0°180.0°
C8C13C12H12179.9°180.0°
C9C10C11H10180.0°179.8°
C9C10C11C120.1°0.2°
C9C10C11H11179.9°179.9°
H9C9C10C11180.0°180.0°
H9C9C10H100.0°0.2°
C10C11C12H11180.0°179.9°
C10C11C12C130.1°0.0°
C10C11C12H12179.9°180.0°
H10C10C11C12179.9°180.0°
H10C10C11H110.1°0.1°
C11C12C13H12180.0°180.0°
C11C12C13H13179.9°180.0°
H11C11C12C13179.9°179.9°
H11C11C12H120.1°0.1°
H12C12C13H130.1°0.1°
C16C15C5H151118.7°120.0°
C16C15C5H152120.0°120.0°
C16C15H151H152119.2°119.9°
C15C16C17H161117.8°120.0°
C15C16C17H162120.0°120.0°
C15C16H161H162118.6°119.9°
C16C15C5N476.4°65.0°
C16C15C5C6160.0°175.0°
C16C15C5H543.8°55.0°
C15C16C17C18176.9°180.0°
C15C16C17H17164.1°60.0°
C15C16C17H17256.9°60.0°
C5C15H151H152119.2°120.1°
C5C15C16C17156.4°180.0°
C5C15C16H16185.9°60.0°
C5C15C16H16236.4°59.9°
C15C5N4C6124.2°120.0°
C15C5N4H5119.4°120.0°
C15C5N4HN441.0°95.0°
C15C5C6H5119.1°120.0°
C15C5C6O2460.9°55.0°
C15C5C6H658.5°175.0°
H151C15C16C1737.6°60.0°
H151C15C16H161155.4°180.0°
H151C15C16H16282.4°60.0°
H151C15C5N4164.8°175.0°
H151C15C5C641.3°55.0°
H151C15C5H575.0°65.0°
H152C15C16C1783.7°60.0°
H152C15C16H16134.1°60.0°
H152C15C16H162156.3°180.0°
H152C15C5N443.5°55.0°
H152C15C5C680.0°65.0°
H152C15C5H5163.7°175.0°
C17C16H161H162118.6°120.0°
C16C17C18H171119.0°120.0°
C16C17C18H172120.0°119.9°
C16C17H171H172119.3°120.0°
C16C17C18N19171.5°180.0°
C16C17C18H18151.6°60.0°
C16C17C18H18268.5°60.0°
H161C16C17C1859.1°60.0°
H161C16C17H171178.1°180.0°
H161C16C17H17260.9°60.0°
H162C16C17C1863.2°60.1°
H162C16C17H17155.9°60.0°
H162C16C17H172176.8°180.0°
N23C22O21C25179.2°179.8°
N23C22C25N26103.8°90.3°
N23C22O21N200.1°0.2°
N23C22C25H251140.4°149.8°
N23C22C25H25216.2°29.7°
O21C22C25N2677.2°90.0°
O21C22C25H25138.6°30.0°
O21C22C25H252162.8°150.0°
C22C25N26C27179.6°55.4°
C22C25N26C3157.4°170.0°
C22C25N26H251115.8°120.0°
C22C25N26H252120.0°120.0°
C25C22O21N20179.0°180.0°
C22C25H251H252117.5°120.0°
C27N26C31C25120.7°114.1°
N26C27C28H271120.2°120.0°
N26C27C28H272120.0°120.0°
N26C27H271H272120.1°119.9°
N26C27C28N2957.9°56.0°
C27N26C31C3061.8°66.9°
C27N26C31H311178.1°53.1°
C27N26C31H31258.2°173.1°
C27N26C25H25163.8°64.5°
C27N26C25H25260.4°175.4°
N26C27C28H281178.4°175.7°
N26C27C28H28262.1°63.7°
C31N26C27C2863.2°66.9°
C31N26C27H27157.0°173.1°
C31N26C27H272176.8°53.1°
N26C31C30N2955.6°56.0°
N26C31C30H311120.1°120.0°
N26C31C30H312120.0°120.0°
N26C31C30H301175.7°175.7°
N26C31C30H30264.4°63.7°
N26C31H311H312120.1°120.0°
C31N26C25H25158.4°50.0°
C31N26C25H252177.4°70.0°
C25N26C27C28172.4°179.0°
C25N26C27H27167.4°59.0°
C25N26C27H27252.4°60.9°
C25N26C31C30177.4°179.0°
C25N26C31H31157.3°61.0°
C25N26C31H31262.6°59.0°
N26C25H251H252117.5°120.0°
C28C27H271H272120.2°120.0°
C27C28N29C3056.0°48.9°
C27C28N29C32125.6°131.0°
C27C28N29H281120.5°119.7°
C27C28N29H282120.0°119.7°
C27C28H281H282120.4°120.5°
H271C27C28N2962.3°176.0°
H271C27C28H28158.2°64.3°
H271C27C28H282177.7°56.3°
H272C27C28N29177.9°64.1°
H272C27C28H28161.6°55.7°
H272C27C28H28257.9°176.3°
C30N29C32C28178.2°179.9°
N29C30C31H301120.2°119.7°
N29C30C31H302120.0°119.7°
N29C30H301H302120.1°120.5°
N29C30C31H311175.7°64.1°
N29C30C31H31264.5°176.0°
C30N29C32C3334.6°180.0°
C30N29C32O34146.0°0.1°
C30N29C28H281176.6°168.7°
C30N29C28H28264.0°70.8°
C32N29C30C31126.6°130.9°
C32N29C30H3016.5°11.2°
C32N29C30H302113.4°109.3°
N29C32C33O34179.4°179.9°
N29C32C33C3584.1°179.9°
N29C32C33H33135.2°60.0°
N29C32C33H332155.9°60.0°
C32N29C28H2815.1°11.2°
C32N29C28H282114.3°109.4°
C28N29C30C3155.0°48.9°
C28N29C30H301175.2°168.7°
C28N29C30H30264.9°70.8°
C28N29C32C33143.6°0.1°
C28N29C32O3435.8°180.0°
N29C28H281H282120.3°120.5°
C31C30H301H302120.1°120.5°
C30C31H311H312120.0°120.0°
H301C30C31H31164.2°55.7°
H301C30C31H31255.7°64.3°
H302C30C31H31155.7°176.2°
H302C30C31H312175.6°56.3°
C32C33C35H331119.3°120.0°
C32C33C35H332120.0°120.1°
C32C33H331H332119.6°120.0°
C32C33C35C36153.7°180.0°
C32C33C35H35186.8°60.0°
C32C33C35H35233.7°60.0°
O34C32C33C3595.3°0.0°
O34C32C33H331145.4°119.9°
O34C32C33H33224.7°120.1°
C35C33H331H332119.5°120.0°
C33C35C36H351119.4°120.0°
C33C35C36H352120.0°120.0°
C33C35H351H352119.6°119.9°
C33C35C36C37173.7°180.0°
C33C35C36H36168.3°60.1°
C33C35C36H36253.7°60.0°
H331C33C35C3634.4°60.1°
H331C33C35H351153.9°180.0°
H331C33C35H35285.6°60.0°
H332C33C35C3686.3°59.9°
H332C33C35H35133.2°60.1°
H332C33C35H352153.7°180.0°
C36C35H351H352119.7°120.0°
C35C36C37H361118.0°119.9°
C35C36C37H362120.0°120.0°
C35C36H361H362118.7°120.0°
C35C36C37C3870.5°90.4°
C35C36C37C39110.0°90.0°
H351C35C36C3754.2°60.0°
H351C35C36H361172.2°180.0°
H351C35C36H36265.8°60.0°
H352C35C36C3766.3°60.0°
H352C35C36H36151.7°60.0°
H352C35C36H362173.7°NaN°
N4C5C6H5120.0°120.0°
N4C5C6O24178.2°65.0°
N4C5C6H662.5°55.0°
HN4N4C5C683.3°25.0°
HN4N4C5H5160.4°145.0°
C5C6O24H6115.3°120.0°
C5C6O24HO2480.8°60.0°
H5C5C6O2458.2°175.0°
H5C5C6H6177.5°65.0°
C18C17H171H172119.4°120.0°
C17C18N19H181119.9°120.0°
C17C18N19H182120.0°120.0°
C17C18H181H182119.9°120.0°
C17C18N19H19182.0°179.9°
C17C18N19H192158.1°66.2°
H171C17C18N1969.5°60.0°
H171C17C18H181170.6°180.0°
H171C17C18H18250.5°60.0°
H172C17C18N1951.5°60.0°
H172C17C18H18168.4°60.0°
H172C17C18H182171.5°180.0°
N19C18H181H182119.9°120.0°
C18N19H191H192120.0°113.8°
H181C18N19H19138.0°60.1°
H181C18N19H19282.0°53.8°
H182C18N19H191158.1°59.9°
H182C18N19H19238.1°173.8°
HO24O24C6H6163.9°180.0°
C37C36H361H362118.7°120.0°
C36C37C38C39179.6°179.6°
C36C37C38C40179.5°179.8°
C36C37C38H380.5°0.3°
C36C37C39C41179.4°180.0°
C36C37C39H390.6°0.1°
H361C36C37C3847.5°149.7°
H361C36C37C39132.1°29.9°
H362C36C37C38169.5°29.7°
H362C36C37C3910.1°149.9°
C37C38C40H38180.0°179.5°
C38C37C39C410.1°0.4°
C38C37C39H39179.9°179.7°
C37C38C40C420.2°0.6°
C37C38C40H40179.8°179.7°
C39C37C38C400.1°0.6°
C39C37C38H38179.9°179.9°
C37C39C41H39180.0°179.9°
C37C39C41C420.0°0.1°
C37C39C41H41180.0°179.9°
C38C40C42H40180.0°179.7°
C38C40C42C410.3°0.3°
C38C40C42H42179.6°179.8°
H38C38C40C42179.8°179.9°
H38C38C40H400.2°0.3°
C39C41C42C400.3°0.1°
C39C41C42H41180.0°179.9°
C39C41C42H42179.7°180.0°
H39C39C41C42180.0°180.0°
H39C39C41H410.0°0.1°
C40C42C41H42180.0°179.9°
C40C42C41H41179.8°180.0°
H40C40C42C41179.7°180.0°
H40C40C42H420.3°0.1°
H41C41C42H420.3°0.1°

222926

PDB entries from 2024-07-24

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