58Y

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C8	C7	sing	1.53Å	1.55Å
C7	S1	sing	1.84Å	1.62Å
C7	N2	sing	1.48Å	1.46Å
S1	C1	sing	1.84Å	1.62Å
N2	C2	sing	1.48Å	1.64Å
C1	C2	sing	1.55Å	1.43Å
C1	O5	sing	1.41Å	1.64Å
C2	C3	sing	1.53Å	1.47Å
O5	C5	sing	1.43Å	1.33Å
C5	C4	sing	1.53Å	1.53Å
C5	C6	sing	1.53Å	1.56Å
C3	C4	sing	1.53Å	1.53Å
C3	O3	sing	1.43Å	1.45Å
C4	O4	sing	1.43Å	1.41Å
C6	O6	sing	1.43Å	1.41Å
C1	H1	sing	1.09Å	1.10Å
C2	H2	sing	1.09Å	1.10Å
C3	H3	sing	1.09Å	1.10Å
C4	H4	sing	1.09Å	1.10Å
C5	H5	sing	1.09Å	1.10Å
C6	H6	sing	1.09Å	1.10Å
C6	H7	sing	1.09Å	1.10Å
C7	H8	sing	1.09Å	1.10Å
C8	H9	sing	1.09Å	1.10Å
C8	H10	sing	1.09Å	1.10Å
C8	H11	sing	1.09Å	1.10Å
N2	H12	sing	1.01Å	1.00Å
O3	H14	sing	0.97Å	0.95Å
O4	H15	sing	0.97Å	0.95Å
O6	H16	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C8	C7	S1	110.4°	110.3°
C8	C7	N2	110.7°	110.3°
C8	C7	H8	110.1°	110.4°
C7	C8	H9	109.5°	109.4°
C7	C8	H10	109.5°	109.5°
C7	C8	H11	109.5°	109.5°
S1	C7	N2	104.9°	104.9°
C7	S1	C1	101.1°	94.5°
S1	C7	H8	109.2°	110.4°
C7	N2	C2	107.7°	114.4°
N2	C7	H8	111.4°	110.4°
C7	N2	H12	109.9°	111.0°
S1	C1	C2	103.8°	100.3°
S1	C1	O5	118.5°	111.5°
S1	C1	H1	106.7°	111.0°
N2	C2	C1	106.2°	108.3°
N2	C2	C3	101.5°	107.0°
N2	C2	H2	110.2°	110.8°
C2	N2	H12	109.9°	111.0°
C2	C1	O5	111.9°	113.8°
C1	C2	C3	112.2°	110.2°
C2	C1	H1	109.0°	110.0°
C1	C2	H2	113.3°	110.2°
C1	O5	C5	112.4°	117.0°
O5	C1	H1	106.5°	110.0°
C2	C3	C4	114.7°	110.5°
C2	C3	O3	108.1°	109.2°
C3	C2	H2	112.6°	110.2°
C2	C3	H3	108.4°	109.3°
O5	C5	C4	113.7°	107.9°
O5	C5	C6	107.7°	109.8°
O5	C5	H5	110.4°	109.8°
C4	C5	C6	109.8°	109.8°
C5	C4	C3	113.9°	108.1°
C5	C4	O4	110.7°	109.7°
C5	C4	H4	106.7°	109.7°
C4	C5	H5	107.7°	109.7°
C5	C6	O6	107.9°	109.5°
C6	C5	H5	107.4°	109.8°
C5	C6	H6	109.9°	109.4°
C5	C6	H7	109.8°	109.5°
C4	C3	O3	109.3°	109.3°
C3	C4	O4	110.3°	109.7°
C4	C3	H3	107.6°	109.3°
C3	C4	H4	106.7°	109.7°
O3	C3	H3	108.6°	109.3°
C3	O3	H14	109.5°	114.0°
O4	C4	H4	108.2°	109.8°
C4	O4	H15	109.5°	114.0°
O6	C6	H6	109.8°	109.5°
O6	C6	H7	109.8°	109.5°
C6	O6	H16	109.5°	114.0°
H6	C6	H7	109.5°	109.5°
H9	C8	H10	109.5°	109.5°
H9	C8	H11	109.4°	109.5°
H10	C8	H11	109.5°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C8	C7	S1	N2	119.3°	118.8°
C8	C7	S1	H8	121.2°	122.3°
C8	C7	N2	H8	122.9°	122.3°
C8	C7	S1	C1	151.6°	136.8°
C8	C7	N2	C2	132.8°	112.9°
C7	C8	H9	H10	120.0°	120.0°
C7	C8	H9	H11	120.0°	120.0°
C7	C8	H10	H11	120.0°	120.0°
C8	C7	N2	H12	13.1°	13.7°
S1	C7	N2	H8	118.0°	118.9°
S1	C7	N2	C2	13.7°	5.9°
C7	S1	C1	C2	40.9°	34.5°
C7	S1	C1	O5	165.7°	155.2°
C7	S1	C1	H1	74.3°	81.8°
S1	C7	C8	H9	180.0°	61.5°
S1	C7	C8	H10	60.0°	178.5°
S1	C7	C8	H11	60.0°	58.5°
S1	C7	N2	H12	106.1°	132.5°
N2	C7	S1	C1	32.3°	18.0°
C7	N2	C2	H12	119.8°	126.6°
C7	N2	C2	C1	12.8°	33.3°
C7	N2	C2	C3	104.6°	85.5°
C7	N2	C2	H2	135.8°	154.3°
N2	C7	C8	H9	64.3°	177.0°
N2	C7	C8	H10	55.7°	63.0°
N2	C7	C8	H11	175.7°	57.0°
S1	C1	C2	N2	33.0°	42.6°
S1	C1	C2	O5	129.0°	119.1°
S1	C1	C2	H1	113.5°	117.0°
S1	C1	O5	H1	120.1°	123.6°
S1	C1	C2	C3	77.0°	74.1°
S1	C1	O5	C5	64.5°	60.7°
S1	C1	C2	H2	154.1°	164.0°
C1	S1	C7	H8	87.2°	100.9°
N2	C2	C1	C3	110.0°	116.7°
N2	C2	C1	H2	121.1°	121.3°
N2	C2	C1	O5	162.0°	161.7°
N2	C2	C3	H2	117.8°	120.5°
N2	C2	C3	C4	161.0°	168.1°
N2	C2	C3	O3	76.8°	71.7°
N2	C2	C1	H1	80.5°	74.4°
N2	C2	C3	H3	40.7°	47.8°
C2	N2	C7	H8	104.3°	124.8°
C2	C1	O5	H1	119.1°	124.0°
C1	C2	C3	H2	129.3°	121.9°
C2	C1	O5	C5	56.3°	51.7°
C1	C2	C3	C4	48.0°	50.5°
C1	C2	C3	O3	170.2°	170.8°
C1	C2	C3	H3	72.2°	69.8°
C1	C2	N2	H12	132.5°	159.9°
O5	C1	C2	C3	52.0°	45.0°
C1	O5	C5	C4	50.8°	59.5°
C1	O5	C5	C6	172.8°	179.1°
O5	C1	C2	H2	76.9°	77.0°
C1	O5	C5	H5	70.3°	60.0°
C2	C3	C4	C5	42.6°	59.8°
C2	C3	C4	O3	121.5°	120.2°
C2	C3	C4	H3	120.7°	120.3°
C2	C3	O3	H3	117.4°	119.5°
C2	C3	C4	O4	82.5°	59.8°
C3	C2	C1	H1	169.5°	168.9°
C2	C3	C4	H4	160.1°	179.5°
C3	C2	N2	H12	15.1°	41.1°
C2	C3	O3	H14	180.0°	180.0°
O5	C5	C4	C6	120.8°	119.6°
O5	C5	C4	H5	122.7°	119.7°
O5	C5	C6	H5	118.9°	120.9°
O5	C5	C4	C3	46.2°	61.7°
O5	C5	C4	O4	78.8°	58.0°
O5	C5	C6	O6	6.9°	66.5°
C5	O5	C1	H1	175.3°	175.7°
O5	C5	C4	H4	163.8°	178.7°
O5	C5	C6	H6	112.9°	173.5°
O5	C5	C6	H7	126.6°	53.5°
C4	C5	C6	H5	116.8°	120.7°
C5	C4	C3	O4	125.2°	119.7°
C5	C4	C3	H4	117.5°	119.7°
C5	C4	C3	O3	164.2°	179.9°
C5	C4	O4	H4	116.6°	120.7°
C4	C5	C6	O6	117.4°	175.0°
C5	C4	C3	H3	78.1°	60.4°
C4	C5	C6	H6	122.8°	55.0°
C4	C5	C6	H7	2.3°	65.0°
C5	C4	O4	H15	180.0°	61.3°
C6	C5	C4	C3	167.0°	178.7°
C6	C5	C4	O4	42.0°	61.6°
C5	C6	O6	H6	119.8°	120.0°
C5	C6	O6	H7	119.8°	120.0°
C6	C5	C4	H4	75.5°	59.0°
C5	C6	H6	H7	120.7°	120.0°
C5	C6	O6	H16	180.0°	180.0°
C4	C3	O3	H3	117.1°	119.5°
C3	C4	O4	H4	116.4°	120.6°
C4	C3	C2	H2	81.3°	71.4°
C3	C4	C5	H5	76.4°	58.0°
C4	C3	O3	H14	54.5°	59.0°
C3	C4	O4	H15	53.0°	180.0°
O3	C3	C4	O4	39.0°	60.4°
O3	C3	C2	H2	40.9°	48.8°
O3	C3	C4	H4	78.3°	60.3°
O4	C4	C3	H3	156.8°	179.9°
O4	C4	C5	H5	158.6°	177.6°
O6	C6	C5	H5	125.8°	54.3°
O6	C6	H6	H7	120.7°	120.0°
H1	C1	C2	H2	40.6°	47.0°
H2	C2	C3	H3	158.5°	168.3°
H2	C2	N2	H12	104.4°	79.1°
H3	C3	C4	H4	39.4°	59.2°
H3	C3	O3	H14	62.6°	60.5°
H4	C4	C5	H5	41.1°	61.7°
H4	C4	O4	H15	63.4°	59.3°
H5	C5	C6	H6	6.1°	65.7°
H5	C5	C6	H7	114.4°	174.3°
H6	C6	O6	H16	60.2°	60.0°
H7	C6	O6	H16	60.3°	60.0°
H8	C7	C8	H9	59.3°	60.8°
H8	C7	C8	H10	179.3°	59.2°
H8	C7	C8	H11	60.7°	179.2°
H8	C7	N2	H12	135.9°	108.6°
H9	C8	H10	H11	120.0°	120.0°

Release date:	2016-09-07
Definition date:	2015-08-26
Last modified:	2016-09-02
Release status:	REL
Processing site:	RCSB
Derived from:	5DF0