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574

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O2'Bsing1.43Å1.50Å
C12Bsing1.57Å1.50Å
BO3'sing1.43Å1.52Å
O2PPsing1.61Å1.50Å
O5'Psing1.61Å1.62Å
PO1Psing1.61Å1.51Å
C2N1doub1.32Å1.35ÅAromatic
N1C6sing1.33Å1.36ÅAromatic
C10O1sing1.43Å1.43Å
O1HO1sing0.97Å0.95Å
C2N3sing1.32Å1.34ÅAromatic
C2H2sing1.08Å1.08Å
N3C4doub1.33Å1.35ÅAromatic
C4C5sing1.41Å1.39ÅAromatic
C4N9sing1.37Å1.33ÅAromatic
C6C5doub1.41Å1.38ÅAromatic
C5N7sing1.35Å1.34ÅAromatic
C6N6sing1.38Å1.36Å
N6HN6sing0.97Å1.00Å
N6HN6Asing0.97Å1.00Å
N7C8doub1.30Å1.35ÅAromatic
N9C8sing1.36Å1.35ÅAromatic
C8H8sing1.08Å1.08Å
C1'N9sing1.47Å1.49Å
C1'O4'sing1.45Å1.39Å
C1'C2'sing1.54Å1.54Å
C1'H1'sing1.09Å1.10Å
C11C10sing1.51Å1.49Å
C17C10sing1.53Å1.54Å
C10H10sing1.09Å1.10Å
C13C11doub1.38Å1.40ÅAromatic
C12C11sing1.39Å1.38ÅAromatic
C16C12doub1.39Å1.39ÅAromatic
C14C13sing1.38Å1.39ÅAromatic
C13H13sing1.08Å1.08Å
C15C14doub1.38Å1.39ÅAromatic
C14H14sing1.08Å1.08Å
C15C16sing1.38Å1.41ÅAromatic
C15H15sing1.08Å1.08Å
C16H16sing1.08Å1.08Å
N18C17sing1.47Å1.46Å
C17H17sing1.09Å1.10Å
C17H17Asing1.09Å1.10Å
N18HN18sing1.01Å1.00Å
N18HN1Asing1.01Å1.00Å
O1PHO1Psing0.97Å0.95Å
O2'C2'sing1.44Å1.43Å
C2'C3'sing1.56Å1.51Å
C2'H2'sing1.09Å1.10Å
O2PHO2Psing0.97Å0.95Å
C4'C3'sing1.54Å1.51Å
C3'O3'sing1.44Å1.42Å
C3'H3'sing1.09Å1.10Å
O4'C4'sing1.44Å1.42Å
C4'C5'sing1.53Å1.51Å
C4'H4'sing1.09Å1.10Å
O5'C5'sing1.43Å1.41Å
C5'H5'sing1.09Å1.10Å
C5'H5'Asing1.09Å1.10Å
PO3Pdoub1.48Å47.11Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O2'BC12116.9°127.6°
O2'BO3'102.1°104.8°
BO2'C2'112.1°104.9°
C12BO3'119.8°127.6°
BC12C11111.7°120.1°
BC12C16127.4°120.1°
BO3'C3'110.7°104.8°
O2PPO5'108.7°109.4°
O2PPO1P122.0°109.5°
PO2PHO2P109.5°114.0°
O2PPO3P31.4°109.5°
O5'PO1P107.2°109.5°
PO5'C5'119.9°123.0°
O5'PO3P112.0°109.5°
PO1PHO1P109.5°114.0°
O1PPO3P138.7°109.5°
C2N1C6121.2°121.2°
N1C2N3119.9°122.4°
N1C2H2120.1°118.8°
N1C6C5119.1°118.5°
N1C6N6120.8°120.8°
C10O1HO1109.5°114.0°
O1C10C11102.6°109.5°
O1C10C17104.2°109.4°
O1C10H10114.0°109.5°
N3C2H2120.0°118.8°
C2N3C4121.4°120.7°
N3C4C5119.6°119.0°
N3C4N9132.6°135.0°
C5C4N9107.8°106.0°
C4C5C6118.7°118.2°
C4C5N7108.2°107.1°
C4N9C8107.1°107.5°
C4N9C1'126.6°126.3°
C6C5N7133.1°134.7°
C5C6N6120.1°120.7°
C5N7C8106.6°109.5°
C6N6HN6109.5°120.0°
C6N6HN6A109.5°120.0°
HN6N6HN6A109.5°120.0°
N7C8N9110.2°110.0°
N7C8H8124.9°125.1°
N9C8H8124.9°125.0°
C8N9C1'125.3°126.2°
N9C1'O4'113.9°110.4°
N9C1'C2'107.6°110.3°
N9C1'H1'109.6°110.3°
O4'C1'C2'105.2°104.9°
O4'C1'H1'111.1°110.3°
C1'O4'C4'111.2°105.3°
C2'C1'H1'109.1°110.5°
C1'C2'O2'113.1°109.0°
C1'C2'C3'104.8°103.9°
C1'C2'H2'110.5°112.8°
C11C10C17109.7°109.5°
C11C10H10113.2°109.5°
C10C11C13126.9°120.1°
C10C11C12112.4°120.1°
C17C10H10112.3°109.5°
C10C17N18111.5°109.5°
C10C17H17108.9°109.5°
C10C17H17A109.0°109.5°
C13C11C12120.8°119.9°
C11C13C14119.0°120.1°
C11C13H13120.5°119.9°
C11C12C16120.8°119.7°
C12C16C15118.9°119.9°
C12C16H16120.5°120.0°
C14C13H13120.5°120.0°
C13C14C15120.3°120.3°
C13C14H14119.8°119.9°
C15C14H14119.8°119.9°
C14C15C16120.1°120.1°
C14C15H15119.9°120.0°
C16C15H15119.9°119.9°
C15C16H16120.5°120.1°
N18C17H17109.0°109.4°
N18C17H17A109.0°109.5°
C17N18HN18109.5°111.0°
C17N18HN1A109.5°110.9°
H17C17H17A109.5°109.4°
HN18N18HN1A109.5°111.0°
O2'C2'C3'105.0°104.4°
O2'C2'H2'112.1°113.1°
C3'C2'H2'110.9°112.9°
C2'C3'C4'103.0°103.9°
C2'C3'O3'107.2°104.3°
C2'C3'H3'112.1°113.0°
C4'C3'O3'107.9°108.7°
C4'C3'H3'112.1°113.4°
C3'C4'O4'108.7°105.0°
C3'C4'C5'112.5°110.3°
C3'C4'H4'109.2°110.4°
O3'C3'H3'113.7°112.9°
O4'C4'C5'106.9°110.4°
O4'C4'H4'110.4°110.4°
C5'C4'H4'109.1°110.3°
C4'C5'O5'105.4°109.5°
C4'C5'H5'110.5°109.5°
C4'C5'H5'A110.5°109.4°
O5'C5'H5'110.5°109.5°
O5'C5'H5'A110.5°109.5°
H5'C5'H5'A109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O2'BC12O3'124.2°179.7°
BO2'C2'C1'128.1°134.1°
O2'BC12C11111.1°0.3°
O2'BC12C1669.4°179.8°
BO2'C2'C3'14.4°23.6°
BO2'C2'H2'106.1°99.6°
O2'BO3'C3'5.5°40.1°
BC12C11C100.3°0.0°
BC12C11C13179.4°179.8°
BC12C11C16179.5°179.9°
BC12C16C15179.7°180.0°
BC12C16H160.3°0.2°
C12BO2'C2'138.8°140.3°
C12BO3'C3'125.5°140.1°
O3'BC12C11124.7°180.0°
O3'BC12C1654.8°0.1°
O3'BO2'C2'6.1°39.9°
BO3'C3'C2'14.3°24.1°
BO3'C3'C4'96.1°134.5°
BO3'C3'H3'138.8°98.9°
O2PPO5'O1P133.6°120.0°
O2PPO5'O3P33.4°120.0°
O2PPO1PO3P35.5°120.0°
O2PPO1PHO1P180.0°60.0°
O2PPO5'C5'137.6°175.0°
O5'PO1PO3P161.6°120.0°
O5'PO1PHO1P53.9°60.0°
O5'PO2PHO2P180.0°180.0°
PO5'C5'C4'173.8°180.0°
PO5'C5'H5'54.5°60.0°
PO5'C5'H5'A66.8°60.0°
O1PPO2PHO2P54.6°60.0°
O1PPO5'C5'4.0°65.0°
N1C2N3H2180.0°179.9°
N1C2N3C40.6°0.0°
C2N1C6C51.9°0.0°
C2N1C6N6179.2°180.0°
C6N1C2N31.4°0.0°
C6N1C2H2178.5°180.0°
N1C6C5C41.6°0.0°
N1C6C5N6178.9°180.0°
N1C6C5N7177.5°180.0°
N1C6N6HN60.0°0.0°
N1C6N6HN6A120.0°180.0°
O1C10C11C17110.4°120.0°
O1C10C11H10123.4°120.0°
O1C10C17H10123.9°120.1°
O1C10C11C13176.0°24.7°
O1C10C11C125.0°155.0°
O1C10C17N1851.9°65.1°
O1C10C17H1768.4°175.0°
O1C10C17H17A172.2°55.0°
HO1O1C10C11180.0°60.0°
HO1O1C10C1765.5°60.0°
HO1O1C10H1057.2°180.0°
C2N3C4C50.3°0.0°
C2N3C4N9178.6°180.0°
H2C2N3C4179.4°180.0°
N3C4C5N9179.2°180.0°
N3C4C5C60.8°0.0°
N3C4C5N7178.4°180.0°
N3C4N9C8178.5°180.0°
N3C4N9C1'9.4°0.0°
C4C5C6N7179.1°180.0°
C4C5C6N6179.5°180.0°
C4C5N7C81.3°0.0°
C5C4N9C82.5°0.0°
C5C4N9C1'171.6°179.9°
N9C4C5C6178.3°180.0°
N9C4C5N72.4°0.0°
C4N9C8N71.7°0.0°
C4N9C8C1'169.3°180.0°
C4N9C8H8178.3°180.0°
C4N9C1'O4'98.7°156.4°
C4N9C1'C2'145.0°88.1°
C4N9C1'H1'26.6°34.2°
C5C6N6HN6178.9°180.0°
C5C6N6HN6A61.1°0.0°
C6C5N7C8179.6°180.0°
N7C5C6N61.5°0.0°
C5N7C8N90.2°0.0°
C5N7C8H8179.8°180.0°
C6N6HN6HN6A120.0°180.0°
N7C8N9H8180.0°180.0°
N7C8N9C1'171.0°179.9°
C8N9C1'O4'94.1°23.5°
C8N9C1'C2'22.2°91.9°
C8N9C1'H1'140.7°145.7°
H8C8N9C1'9.0°0.0°
N9C1'O4'C2'117.7°118.9°
N9C1'O4'H1'124.4°122.2°
N9C1'C2'H1'118.9°122.2°
N9C1'C2'O2'151.2°106.2°
N9C1'C2'C3'95.0°142.9°
N9C1'C2'H2'24.5°20.3°
N9C1'O4'C4'97.7°159.6°
O4'C1'C2'H1'119.3°118.9°
O4'C1'C2'O2'86.9°134.9°
O4'C1'C2'C3'26.9°24.0°
O4'C1'C2'H2'146.4°98.6°
C1'O4'C4'C3'5.2°40.7°
C1'O4'C4'C5'116.6°159.6°
C1'O4'C4'H4'124.9°78.2°
C1'C2'O2'C3'113.7°110.5°
C1'C2'O2'H2'125.8°126.3°
C1'C2'C3'H2'119.3°122.5°
C1'C2'C3'C4'23.1°0.0°
C1'C2'C3'O3'136.8°113.8°
C1'C2'C3'H3'97.7°123.2°
C2'C1'O4'C4'20.0°40.7°
H1'C1'C2'O2'32.3°16.0°
H1'C1'C2'C3'146.1°94.9°
H1'C1'C2'H2'94.4°142.5°
H1'C1'O4'C4'137.8°78.2°
C11C10C17H10126.8°120.0°
C10C11C13C12178.9°179.7°
C10C11C12C16179.8°180.0°
C10C11C13C14179.9°180.0°
C10C11C13H130.1°0.0°
C11C10C17N1857.4°175.0°
C11C10C17H17177.7°55.0°
C11C10C17H17A62.9°65.0°
C17C10C11C1373.7°95.2°
C17C10C11C12105.3°85.0°
C10C17N18H17120.3°120.0°
C10C17N18H17A120.3°120.1°
C10C17H17H17A119.1°120.0°
C10C17N18HN18180.0°180.0°
C10C17N18HN1A60.0°56.0°
H10C10C11C1352.6°144.7°
H10C10C11C12128.4°35.0°
H10C10C17N18175.8°55.0°
H10C10C17H1755.5°65.0°
H10C10C17H17A63.9°175.0°
C13C11C12C161.1°0.3°
C11C13C14H13180.0°180.0°
C11C13C14C150.7°0.0°
C11C13C14H14179.3°180.0°
C12C11C13C141.0°0.3°
C12C11C13H13179.0°179.7°
C11C12C16C150.9°0.1°
C11C12C16H16179.1°179.7°
C12C16C15C140.6°0.2°
C12C16C15H16180.0°179.8°
C12C16C15H15179.4°179.9°
C13C14C15H14180.0°179.9°
C13C14C15C160.5°0.2°
C13C14C15H15179.5°180.0°
H13C13C14C15179.3°180.0°
H13C13C14H140.7°0.1°
C14C15C16H15180.0°179.8°
C14C15C16H16179.4°180.0°
H14C14C15C16179.5°179.7°
H14C14C15H150.5°0.0°
H15C15C16H160.6°0.3°
N18C17H17H17A119.1°120.0°
C17N18HN18HN1A120.0°123.9°
H17C17N18HN1859.7°60.0°
H17C17N18HN1A179.7°176.0°
H17AC17N18HN1859.7°59.9°
H17AC17N18HN1A60.3°64.0°
HO1PO1PPO3P144.5°180.0°
O2'C2'C3'H2'121.3°123.3°
O2'C2'C3'C4'96.4°114.2°
O2'C2'C3'O3'17.4°0.3°
O2'C2'C3'H3'142.9°122.6°
C2'C3'C4'O3'113.2°110.7°
C2'C3'C4'H3'120.8°123.0°
C2'C3'O3'H3'124.5°123.0°
C2'C3'C4'O4'12.1°24.1°
C2'C3'C4'C5'130.3°143.0°
C2'C3'C4'H4'108.4°94.9°
H2'C2'C3'C4'142.3°122.5°
H2'C2'C3'O3'103.9°123.6°
H2'C2'C3'H3'21.5°0.7°
HO2PO2PPO3P78.2°60.0°
C4'C3'O3'H3'125.1°126.7°
C3'C4'O4'C5'121.7°118.9°
C3'C4'O4'H4'119.7°118.9°
C3'C4'C5'H4'121.3°122.2°
C3'C4'C5'O5'177.6°175.0°
C3'C4'C5'H5'63.1°55.0°
C3'C4'C5'H5'A58.3°65.0°
O3'C3'C4'O4'125.3°134.7°
O3'C3'C4'C5'116.5°106.4°
O3'C3'C4'H4'4.8°15.7°
H3'C3'C4'O4'108.7°98.9°
H3'C3'C4'C5'9.6°20.0°
H3'C3'C4'H4'130.9°142.1°
O4'C4'C5'H4'119.4°122.3°
O4'C4'C5'O5'58.3°69.4°
O4'C4'C5'H5'177.6°170.5°
O4'C4'C5'H5'A61.0°50.5°
C4'C5'O5'H5'119.4°120.0°
C4'C5'O5'H5'A119.3°120.0°
C4'C5'H5'H5'A121.9°120.0°
H4'C4'C5'O5'61.0°52.8°
H4'C4'C5'H5'58.3°67.2°
H4'C4'C5'H5'A179.6°172.8°
O5'C5'H5'H5'A121.9°120.0°
C5'O5'PO3P171.0°55.0°

224931

PDB entries from 2024-09-11

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