56N

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C4'	C5'	doub	1.38Å	1.39Å	Aromatic
C4'	C3'	sing	1.38Å	1.39Å	Aromatic
C5'	C6'	sing	1.38Å	1.38Å	Aromatic
C3'	C2'	doub	1.38Å	1.39Å	Aromatic
C6'	C1'	doub	1.39Å	1.39Å	Aromatic
C2'	C1'	sing	1.39Å	1.40Å	Aromatic
C1'	O1	sing	1.36Å	1.41Å
O1	C1	sing	1.43Å	1.40Å
O2	C2	sing	1.43Å	1.42Å
C1	C2	sing	1.53Å	1.52Å
C1	O5	sing	1.43Å	1.41Å
C2	C3	sing	1.53Å	1.51Å
O5	C5	sing	1.43Å	1.41Å
C3	O3	sing	1.43Å	1.41Å
C3	C4	sing	1.53Å	1.51Å
C5	C4	sing	1.53Å	1.52Å
C5	C6	sing	1.53Å	1.51Å
C4	O4	sing	1.43Å	1.42Å
O6	C6	sing	1.43Å	1.42Å
O2	HO2	sing	0.97Å	0.95Å
O3	HO3	sing	0.97Å	0.95Å
O4	HO4	sing	0.97Å	0.95Å
C1	H1	sing	1.09Å	1.10Å
C2	H2	sing	1.09Å	1.10Å
C3	H3	sing	1.09Å	1.10Å
C4	H4	sing	1.09Å	1.10Å
C5	H5	sing	1.09Å	1.10Å
C6	H61	sing	1.09Å	1.10Å
C6	H62	sing	1.09Å	1.10Å
O6	HO6	sing	0.97Å	0.95Å
C2'	H12	sing	1.08Å	1.08Å
C3'	H13	sing	1.08Å	1.08Å
C4'	H14	sing	1.08Å	1.08Å
C5'	H15	sing	1.08Å	1.08Å
C6'	H16	sing	1.08Å	1.08Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C5'	C4'	C3'	120.5°	120.1°
C4'	C5'	C6'	119.9°	120.1°
C5'	C4'	H14	119.7°	119.9°
C4'	C5'	H15	120.0°	120.0°
C4'	C3'	C2'	119.6°	120.0°
C4'	C3'	H13	120.2°	120.0°
C3'	C4'	H14	119.8°	119.9°
C5'	C6'	C1'	120.0°	120.0°
C6'	C5'	H15	120.1°	120.0°
C5'	C6'	H16	120.0°	120.0°
C3'	C2'	C1'	119.6°	119.9°
C3'	C2'	H12	120.2°	120.1°
C2'	C3'	H13	120.2°	119.9°
C6'	C1'	C2'	120.3°	119.9°
C6'	C1'	O1	116.8°	120.1°
C1'	C6'	H16	120.0°	120.0°
C2'	C1'	O1	122.9°	120.1°
C1'	C2'	H12	120.2°	120.0°
C1'	O1	C1	113.6°	117.0°
O1	C1	C2	108.7°	109.5°
O1	C1	O5	110.3°	109.5°
O1	C1	H1	110.4°	109.5°
O2	C2	C1	109.8°	109.5°
O2	C2	C3	111.8°	109.5°
C2	O2	HO2	109.5°	114.0°
O2	C2	H2	110.0°	109.5°
C2	C1	O5	108.3°	109.4°
C1	C2	C3	107.8°	109.2°
C2	C1	H1	108.8°	109.5°
C1	C2	H2	108.7°	109.5°
C1	O5	C5	115.8°	114.1°
O5	C1	H1	110.3°	109.5°
C2	C3	O3	110.8°	109.5°
C2	C3	C4	110.7°	109.1°
C3	C2	H2	108.7°	109.6°
C2	C3	H3	108.8°	109.5°
O5	C5	C4	109.9°	109.4°
O5	C5	C6	109.9°	109.5°
O5	C5	H5	109.3°	109.4°
O3	C3	C4	107.7°	109.6°
C3	O3	HO3	109.5°	114.0°
O3	C3	H3	110.2°	109.5°
C3	C4	C5	111.0°	109.2°
C3	C4	O4	108.0°	109.5°
C4	C3	H3	108.8°	109.6°
C3	C4	H4	107.6°	109.5°
C4	C5	C6	111.8°	109.5°
C5	C4	O4	113.6°	109.5°
C5	C4	H4	107.5°	109.6°
C4	C5	H5	107.9°	109.5°
C5	C6	O6	109.2°	109.5°
C6	C5	H5	108.0°	109.5°
C5	C6	H61	109.5°	109.4°
C5	C6	H62	109.5°	109.5°
C4	O4	HO4	109.5°	114.0°
O4	C4	H4	108.8°	109.5°
O6	C6	H61	109.5°	109.5°
O6	C6	H62	109.5°	109.5°
C6	O6	HO6	109.5°	114.0°
H61	C6	H62	109.5°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C5'	C4'	C3'	H14	180.0°	179.7°
C4'	C5'	C6'	H15	180.0°	179.7°
C5'	C4'	C3'	C2'	0.0°	0.0°
C4'	C5'	C6'	C1'	0.0°	0.7°
C5'	C4'	C3'	H13	180.0°	179.9°
C4'	C5'	C6'	H16	180.0°	180.0°
C3'	C4'	C5'	C6'	0.1°	0.3°
C4'	C3'	C2'	H13	180.0°	180.0°
C4'	C3'	C2'	C1'	0.0°	0.0°
C4'	C3'	C2'	H12	179.9°	180.0°
C3'	C4'	C5'	H15	179.9°	180.0°
C5'	C6'	C1'	H16	180.0°	179.3°
C5'	C6'	C1'	C2'	0.0°	0.7°
C5'	C6'	C1'	O1	180.0°	179.7°
C6'	C5'	C4'	H14	179.9°	180.0°
C3'	C2'	C1'	C6'	0.1°	0.3°
C3'	C2'	C1'	H12	180.0°	180.0°
C3'	C2'	C1'	O1	180.0°	180.0°
C2'	C3'	C4'	H14	180.0°	179.7°
C6'	C1'	C2'	O1	180.0°	179.6°
C6'	C1'	O1	C1	175.1°	0.3°
C6'	C1'	C2'	H12	179.9°	179.7°
C1'	C6'	C5'	H15	180.0°	179.7°
C2'	C1'	O1	C1	4.9°	180.0°
C1'	C2'	C3'	H13	180.0°	179.9°
C2'	C1'	C6'	H16	179.9°	180.0°
C1'	O1	C1	C2	156.4°	175.0°
C1'	O1	C1	O5	85.0°	65.1°
C1'	O1	C1	H1	37.1°	55.0°
O1	C1'	C2'	H12	0.1°	0.1°
O1	C1'	C6'	H16	0.0°	0.4°
O1	C1	C2	O2	57.9°	62.5°
O1	C1	C2	O5	119.9°	120.0°
O1	C1	C2	H1	120.3°	120.0°
O1	C1	O5	H1	122.3°	120.1°
O1	C1	C2	C3	179.8°	177.6°
O1	C1	O5	C5	177.6°	178.9°
O1	C1	C2	H2	62.6°	57.6°
O2	C2	C1	C3	121.9°	119.9°
O2	C2	C1	H2	120.4°	120.1°
O2	C2	C1	O5	177.7°	177.5°
O2	C2	C3	H2	121.6°	120.2°
O2	C2	C3	O3	62.8°	63.2°
O2	C2	C3	C4	177.9°	176.9°
O2	C2	C1	H1	62.4°	57.5°
O2	C2	C3	H3	58.5°	56.9°
C2	C1	O5	H1	118.9°	120.0°
C1	C2	C3	H2	117.7°	119.9°
C2	C1	O5	C5	63.6°	61.1°
C1	C2	C3	O3	176.5°	176.8°
C1	C2	C3	C4	57.2°	56.9°
C1	C2	O2	HO2	180.0°	60.0°
C1	C2	C3	H3	62.2°	63.0°
O5	C1	C2	C3	60.3°	57.6°
C1	O5	C5	C4	57.9°	61.1°
C1	O5	C5	C6	178.7°	178.8°
O5	C1	C2	H2	57.3°	62.4°
C1	O5	C5	H5	60.3°	58.8°
C2	C3	O3	C4	121.1°	119.6°
C2	C3	O3	H3	120.4°	120.1°
C2	C3	C4	H3	119.4°	119.9°
C2	C3	C4	C5	52.6°	57.0°
C2	C3	C4	O4	72.6°	62.9°
C3	C2	O2	HO2	60.5°	179.7°
C2	C3	O3	HO3	180.0°	60.0°
C3	C2	C1	H1	59.5°	62.4°
C2	C3	C4	H4	170.1°	176.9°
O5	C5	C4	C3	50.3°	57.6°
O5	C5	C4	C6	122.4°	120.0°
O5	C5	C4	H5	119.1°	119.9°
O5	C5	C6	H5	119.2°	120.0°
O5	C5	C4	O4	71.7°	62.3°
O5	C5	C6	O6	62.2°	65.0°
C5	O5	C1	H1	55.3°	58.8°
O5	C5	C4	H4	167.8°	177.5°
O5	C5	C6	H61	177.8°	175.0°
O5	C5	C6	H62	57.7°	55.0°
O3	C3	C4	H3	119.3°	120.2°
O3	C3	C4	C5	173.9°	176.9°
O3	C3	C4	O4	48.7°	56.9°
O3	C3	C2	H2	58.9°	56.9°
O3	C3	C4	H4	68.7°	63.2°
C3	C4	C5	O4	122.0°	119.9°
C3	C4	C5	H4	117.5°	119.9°
C3	C4	C5	C6	172.7°	177.6°
C3	C4	O4	H4	116.6°	120.1°
C4	C3	O3	HO3	58.8°	179.5°
C3	C4	O4	HO4	180.0°	60.0°
C4	C3	C2	H2	60.5°	63.0°
C3	C4	C5	H5	68.8°	62.3°
C4	C5	C6	H5	118.5°	120.1°
C5	C4	O4	H4	119.8°	120.2°
C4	C5	C6	O6	175.5°	175.0°
C5	C4	O4	HO4	56.3°	179.7°
C5	C4	C3	H3	66.8°	62.9°
C4	C5	C6	H61	55.5°	55.0°
C4	C5	C6	H62	64.6°	64.9°
C6	C5	C4	O4	50.7°	57.7°
C5	C6	O6	H61	120.0°	120.0°
C5	C6	O6	H62	120.0°	120.0°
C6	C5	C4	H4	69.8°	62.5°
C5	C6	H61	H62	120.1°	120.0°
C5	C6	O6	HO6	180.0°	180.0°
O4	C4	C3	H3	168.0°	177.1°
O4	C4	C5	H5	169.2°	177.7°
O6	C6	C5	H5	57.0°	55.0°
O6	C6	H61	H62	120.1°	120.0°
HO2	O2	C2	H2	60.4°	60.1°
HO3	O3	C3	H3	59.6°	60.2°
HO4	O4	C4	H4	63.4°	60.2°
H1	C1	C2	H2	177.2°	177.6°
H2	C2	C3	H3	179.9°	177.1°
H3	C3	C4	H4	50.7°	57.0°
H4	C4	C5	H5	48.7°	57.6°
H5	C5	C6	H61	63.0°	65.0°
H5	C5	C6	H62	176.9°	175.0°
H61	C6	O6	HO6	60.0°	60.1°
H62	C6	O6	HO6	60.0°	59.9°
H12	C2'	C3'	H13	0.0°	0.0°
H13	C3'	C4'	H14	0.0°	0.3°
H14	C4'	C5'	H15	0.1°	0.3°
H15	C5'	C6'	H16	0.0°	0.3°

Release date:	2015-11-25
Definition date:	2015-08-05
Last modified:	2020-07-17
Release status:	REL
Processing site:	EBI
Derived from:	5D21