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SummaryGeometryRelated PDB entries

559

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CLBCAXsing1.74Å1.71Å
CAXCAYdoub1.38Å1.44ÅAromatic
CAXCAWsing1.38Å1.36ÅAromatic
CAYCAZsing1.38Å1.38ÅAromatic
CAWCAVdoub1.38Å1.38ÅAromatic
NBACASsing1.39Å1.31Å
CATCASdoub1.39Å1.38ÅAromatic
CATCAUsing1.38Å1.37ÅAromatic
CAZCAPdoub1.39Å1.43ÅAromatic
CASNARsing1.32Å1.33ÅAromatic
CAVCAPsing1.39Å1.38ÅAromatic
CAUCAOdoub1.40Å1.41ÅAromatic
CAPNADsing1.40Å1.37Å
NARCAQdoub1.32Å1.43ÅAromatic
CAOCAQsing1.39Å1.42ÅAromatic
CAOCAMsing1.48Å1.49Å
CANCAMdoub1.39Å1.39ÅAromatic
CANCACsing1.38Å1.41ÅAromatic
NADCAEsing1.47Å1.50Å
NADCACsing1.39Å1.41Å
CAMCALsing1.39Å1.36ÅAromatic
CAECAFsing1.54Å1.51Å
CACCABdoub1.40Å1.42ÅAromatic
CALCAKdoub1.38Å1.40ÅAromatic
CABCAKsing1.38Å1.41ÅAromatic
CABNAAsing1.40Å1.41Å
CAFCBBsing1.53Å1.51Å
CAFCAGsing1.50Å1.47Å
NAACAGsing1.37Å1.39ÅAromatic
NAACAJsing1.35Å1.33ÅAromatic
CAGNAHdoub1.30Å1.33ÅAromatic
NAHNAIsing1.29Å1.45ÅAromatic
CAJCBCsing1.51Å1.50Å
CAJNAIdoub1.31Å1.28ÅAromatic
CAUH1sing1.08Å1.08Å
CATH2sing1.08Å1.08Å
NBAH3sing0.97Å1.00Å
NBAH4sing0.97Å1.00Å
CAQH5sing1.08Å1.08Å
CANH6sing1.08Å1.08Å
CALH7sing1.08Å1.08Å
CAKH8sing1.08Å1.08Å
CBCH9sing1.09Å1.10Å
CBCH10sing1.09Å1.10Å
CBCH11sing1.09Å1.10Å
CAFH12sing1.09Å1.10Å
CBBH13sing1.09Å1.10Å
CBBH14sing1.09Å1.10Å
CBBH15sing1.09Å1.10Å
CAEH16sing1.09Å1.10Å
CAEH17sing1.09Å1.10Å
CAVH18sing1.08Å1.08Å
CAWH19sing1.08Å1.08Å
CAYH20sing1.08Å1.08Å
CAZH21sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
CLBCAXCAY118.1°119.9°
CLBCAXCAW123.5°119.9°
CAYCAXCAW118.4°120.2°
CAXCAYCAZ122.8°120.1°
CAXCAYH20118.6°120.0°
CAXCAWCAV118.6°120.0°
CAXCAWH19120.7°120.0°
CAYCAZCAP117.7°119.9°
CAZCAYH20118.6°119.9°
CAYCAZH21121.1°120.1°
CAWCAVCAP124.9°120.0°
CAWCAVH18117.6°120.0°
CAVCAWH19120.7°120.0°
NBACASCAT116.6°119.6°
NBACASNAR121.9°119.6°
CASNBAH3109.5°120.0°
CASNBAH4109.5°120.0°
CASCATCAU119.7°119.2°
CATCASNAR121.5°120.8°
CASCATH2120.2°120.3°
CATCAUCAO121.8°118.4°
CATCAUH1119.1°120.8°
CAUCATH2120.2°120.4°
CAZCAPCAV117.5°119.8°
CAZCAPNAD120.8°120.1°
CAPCAZH21121.2°120.0°
CASNARCAQ120.8°121.8°
CAVCAPNAD121.6°120.1°
CAPCAVH18117.6°120.0°
CAUCAOCAQ117.2°119.1°
CAUCAOCAM121.9°120.5°
CAOCAUH1119.1°120.8°
CAPNADCAE117.1°119.0°
CAPNADCAC118.9°119.0°
NARCAQCAO119.0°120.7°
NARCAQH5120.5°119.7°
CAQCAOCAM120.8°120.5°
CAOCAQH5120.5°119.7°
CAOCAMCAN117.1°119.9°
CAOCAMCAL121.1°119.9°
CAMCANCAC120.7°119.7°
CANCAMCAL121.8°120.2°
CAMCANH6119.7°120.2°
CANCACNAD119.8°121.6°
CANCACCAB117.9°119.7°
CACCANH6119.6°120.1°
CAENADCAC121.2°122.1°
NADCAECAF117.4°109.0°
NADCAEH16107.4°109.6°
NADCAEH17107.5°109.7°
NADCACCAB122.2°118.7°
CAMCALCAK119.5°120.1°
CAMCALH7120.2°120.0°
CAECAFCBB113.3°109.4°
CAECAFCAG110.2°109.6°
CAECAFH12108.3°109.4°
CAFCAEH16107.4°109.5°
CAFCAEH17107.4°109.6°
CACCABCAK120.1°120.5°
CACCABNAA121.0°117.2°
CALCAKCAB120.0°119.8°
CAKCALH7120.2°119.9°
CALCAKH8120.0°120.1°
CAKCABNAA118.9°122.3°
CABCAKH8120.0°120.1°
CABNAACAG119.1°122.8°
CABNAACAJ133.4°130.8°
CBBCAFCAG107.8°109.5°
CBBCAFH12108.3°109.4°
CAFCBBH13109.5°109.4°
CAFCBBH14109.5°109.5°
CAFCBBH15109.5°109.5°
CAFCAGNAA131.9°124.0°
CAFCAGNAH119.6°129.1°
CAGCAFH12108.8°109.5°
CAGNAACAJ107.5°106.4°
NAACAGNAH108.4°107.0°
NAACAJCBC123.0°126.6°
NAACAJNAI110.8°106.9°
CAGNAHNAI105.0°109.8°
NAHNAICAJ108.1°110.0°
CBCCAJNAI126.1°126.6°
CAJCBCH9109.5°109.5°
CAJCBCH10109.5°109.4°
CAJCBCH11109.5°109.4°
H3NBAH4109.4°120.0°
H9CBCH10109.5°109.5°
H9CBCH11109.5°109.5°
H10CBCH11109.5°109.5°
H13CBBH14109.5°109.5°
H13CBBH15109.5°109.5°
H14CBBH15109.4°109.5°
H16CAEH17109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
CLBCAXCAYCAW177.8°179.7°
CLBCAXCAYCAZ178.0°180.0°
CLBCAXCAWCAV179.7°179.7°
CLBCAXCAWH190.3°0.2°
CLBCAXCAYH202.0°0.3°
CAXCAYCAZH20180.0°179.7°
CAYCAXCAWCAV2.6°0.0°
CAXCAYCAZCAP3.2°0.6°
CAYCAXCAWH19177.4°180.0°
CAXCAYCAZH21176.8°180.0°
CAWCAXCAYCAZ4.2°0.3°
CAXCAWCAVH19180.0°180.0°
CAXCAWCAVCAP0.3°0.0°
CAXCAWCAVH18179.7°180.0°
CAWCAXCAYH20175.8°180.0°
CAYCAZCAPH21180.0°179.4°
CAYCAZCAPCAV0.8°0.5°
CAYCAZCAPNAD176.6°179.7°
CAWCAVCAPCAZ0.7°0.2°
CAWCAVCAPH18180.0°180.0°
CAWCAVCAPNAD175.1°180.0°
NBACASCATNAR179.4°179.9°
NBACASCATCAU178.5°180.0°
NBACASNARCAQ178.4°180.0°
NBACASCATH21.4°0.1°
CASNBAH3H4120.0°180.0°
CASCATCAUH2180.0°179.9°
CASCATCAUCAO0.7°0.0°
CATCASNARCAQ1.0°0.1°
CASCATCAUH1179.3°179.7°
CATCASNBAH3179.4°0.0°
CATCASNBAH459.4°180.0°
CAUCATCASNAR0.9°0.1°
CATCAUCAOH1180.0°179.7°
CATCAUCAOCAQ1.9°0.0°
CATCAUCAOCAM178.7°179.7°
CAZCAPCAVNAD175.8°179.7°
CAZCAPNADCAE6.5°174.4°
CAZCAPNADCAC155.3°5.6°
CAZCAPCAVH18179.4°179.7°
CAPCAZCAYH20176.8°179.7°
CASNARCAQCAO0.3°0.1°
NARCASCATH2179.2°180.0°
NARCASNBAH30.0°180.0°
NARCASNBAH4120.0°0.0°
CASNARCAQH5179.7°180.0°
CAVCAPNADCAE169.2°5.8°
CAVCAPNADCAC29.1°174.2°
CAPCAVCAWH19179.7°180.0°
CAVCAPCAZH21179.2°180.0°
CAUCAOCAQNAR1.7°0.0°
CAUCAOCAQCAM176.9°179.7°
CAUCAOCAMCAN31.0°179.7°
CAUCAOCAMCAL152.3°0.0°
CAOCAUCATH2179.3°179.9°
CAUCAOCAQH5178.3°179.9°
CAPNADCACCAN46.5°76.3°
CAPNADCAECAC161.3°180.0°
CAPNADCAECAF162.9°136.8°
CAPNADCACCAB135.4°102.4°
CAPNADCAEH1676.0°17.0°
CAPNADCAEH1741.7°103.3°
NADCAPCAVH184.9°0.0°
NADCAPCAZH213.4°0.3°
NARCAQCAOH5180.0°179.9°
NARCAQCAOCAM178.6°179.7°
CAQCAOCAMCAN152.3°0.1°
CAQCAOCAMCAL24.4°179.7°
CAQCAOCAUH1178.1°179.7°
CAOCAMCANCAL176.7°179.7°
CAOCAMCANCAC177.3°180.0°
CAOCAMCALCAK177.1°179.5°
CAMCAOCAUH11.2°0.0°
CAMCAOCAQH51.4°0.2°
CAOCAMCANH62.7°0.1°
CAOCAMCALH72.9°0.4°
CAMCANCACH6180.0°180.0°
CAMCANCACNAD178.5°177.7°
CAMCANCACCAB0.3°0.9°
CANCAMCALCAK0.5°0.8°
CANCAMCALH7179.5°179.3°
CANCACNADCAE114.5°103.7°
CANCACNADCAB178.1°178.6°
CACCANCAMCAL0.6°0.3°
CANCACCABCAK1.1°1.8°
CANCACCABNAA177.8°177.1°
NADCAECAFH16121.1°119.8°
NADCAECAFH17121.1°120.0°
CAENADCACCAB63.7°77.6°
NADCAECAFCBB85.2°78.1°
NADCAECAFCAG35.7°41.9°
NADCAECAFH12154.6°162.0°
NADCAEH16H17116.4°120.4°
CACNADCAECAF35.8°43.2°
NADCACCABCAK179.3°176.9°
NADCACCABNAA0.4°4.3°
NADCACCANH61.5°2.3°
CACNADCAEH1685.3°163.0°
CACNADCAEH17157.0°76.7°
CAMCALCAKH7180.0°179.9°
CAMCALCAKCAB0.3°0.0°
CALCAMCANH6179.5°179.7°
CAMCALCAKH8179.7°180.0°
CAECAFCBBCAG122.3°120.2°
CAECAFCBBH12120.1°119.9°
CAECAFCAGH12118.6°120.0°
CAECAFCAGNAA60.6°70.0°
CAECAFCAGNAH120.6°110.4°
CAECAFCBBH13180.0°60.2°
CAECAFCBBH1460.0°59.8°
CAECAFCBBH1560.0°179.8°
CAFCAEH16H17116.4°120.2°
CACCABCAKCAL1.2°1.3°
CACCABCAKNAA178.9°178.8°
CACCABNAACAG44.4°45.2°
CACCABNAACAJ138.3°134.5°
CABCACCANH6179.7°179.1°
CACCABCAKH8178.8°178.7°
CALCAKCABH8180.0°180.0°
CALCAKCABNAA177.8°177.5°
CAKCABNAACAG134.5°133.6°
CAKCABNAACAJ42.8°46.7°
CABCAKCALH7179.6°179.9°
CABNAACAGCAF0.4°0.8°
CABNAACAGCAJ177.9°179.7°
CABNAACAGNAH179.3°179.5°
CABNAACAJCBC3.0°0.6°
CABNAACAJNAI179.7°179.5°
NAACABCAKH82.2°2.5°
CBBCAFCAGH12117.2°119.9°
CBBCAFCAGNAA63.6°50.0°
CBBCAFCAGNAH115.3°129.6°
CAFCBBH13H14120.0°120.0°
CAFCBBH13H15120.0°120.0°
CAFCBBH14H15120.0°120.0°
CBBCAFCAEH1635.9°162.0°
CBBCAFCAEH17153.6°41.9°
CAFCAGNAANAH178.9°179.7°
CAFCAGNAACAJ177.6°179.5°
CAFCAGNAHNAI179.5°179.5°
CAGCAFCBBH1357.7°60.0°
CAGCAFCBBH1462.3°180.0°
CAGCAFCBBH15177.8°60.0°
CAGCAFCAEH16156.8°77.9°
CAGCAFCAEH1785.4°162.0°
NAACAGNAHNAI0.4°0.2°
CAGNAACAJCBC179.5°179.7°
CAGNAACAJNAI2.7°0.2°
NAACAGCAFH12179.2°170.0°
CAJNAACAGNAH1.3°0.2°
NAACAJNAINAH3.0°0.1°
NAACAJCBCNAI176.3°179.8°
NAACAJCBCH9176.3°89.9°
NAACAJCBCH1056.2°150.0°
NAACAJCBCH1163.7°30.1°
CAGNAHNAICAJ2.0°0.1°
NAHCAGCAFH122.0°9.6°
NAHNAICAJCBC179.6°179.8°
CAJCBCH9H10120.0°120.0°
CAJCBCH9H11120.0°120.0°
CAJCBCH10H11120.0°119.9°
NAICAJCBCH90.0°89.9°
NAICAJCBCH10120.0°30.1°
NAICAJCBCH11120.0°150.1°
H1CAUCATH20.7°0.4°
H7CALCAKH80.4°0.1°
H9CBCH10H11120.0°120.0°
H12CAFCBBH1359.9°180.0°
H12CAFCBBH14179.9°60.0°
H12CAFCBBH1560.2°60.0°
H12CAFCAEH1684.3°42.2°
H12CAFCAEH1733.5°78.0°
H13CBBH14H15120.0°120.0°
H18CAVCAWH190.3°0.1°
H20CAYCAZH213.2°0.3°

247536

PDB entries from 2026-01-14

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